FFCP PHASE1:Hg19::chr5:191752..191765,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=389257 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=37268 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=100bp_to_BC156515,BC172511_5end | |||
|coexpression_cluster_id=C56 | |||
|description=CAGE_peak_2_at_LRRC14B_5end | |||
|id=chr5:191752..191765,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0004140;4.72e-17;1!UBERON:0010227;5.53e-17;1!UBERON:0010226;1.41e-16;1!UBERON:0005062;3.07e-16;4!UBERON:0007284;3.07e-16;4!UBERON:0008814;8.09e-09;2!UBERON:0010056;8.09e-09;2!UBERON:0003104;8.99e-08;31 | |||
|ontology_enrichment_disease=DOID:114!2.40e-12!2;DOID:178!7.82e-07!1;DOID:326!7.82e-07!1;DOID:3978!7.82e-07!1;DOID:3394!7.82e-07!1;DOID:5844!7.82e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:114;4.34e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:114,4.34e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0001042!5.57e-13!10;UBERON:0009145!5.57e-13!10;UBERON:0003103!7.63e-13!69;UBERON:0007100!2.19e-12!27;UBERON:0000341!3.35e-12!2;UBERON:0001630!5.23e-12!2;UBERON:0005090!5.23e-12!2;UBERON:0006562!8.77e-12!11;UBERON:0007023!1.42e-11!115;UBERON:0004151!1.01e-08!3;UBERON:0000974!1.01e-08!10;UBERON:0003978!1.31e-08!3;UBERON:0009751!1.31e-08!3;UBERON:0000946!1.31e-08!3;UBERON:0002523!1.31e-08!3;UBERON:0005983!1.31e-08!3;UBERON:0002165!1.31e-08!3;UBERON:0002062!1.31e-08!3;UBERON:0007280!1.31e-08!3;UBERON:0001723!2.84e-08!3;UBERON:0001033!2.84e-08!3;UBERON:0010056!2.84e-08!3;UBERON:0002079!3.13e-07!1;UBERON:0002146!3.32e-07!1;UBERON:0005623!3.32e-07!1;UBERON:0002084!4.18e-07!1;UBERON:0002082!4.18e-07!1;UBERON:0004706!4.18e-07!1;UBERON:0002135!5.89e-07!1;UBERON:0000989!6.24e-07!1;UBERON:0008811!6.24e-07!1;UBERON:0006258!6.24e-07!1;UBERON:0005876!6.24e-07!1;UBERON:0004874!6.24e-07!1;UBERON:0007029!6.60e-07!1;UBERON:0002426!6.99e-07!1;UBERON:0003831!6.99e-07!1;UBERON:0003898!6.99e-07!1;UBERON:0004830!6.99e-07!1;UBERON:0001774!6.99e-07!1;UBERON:0003830!6.99e-07!1;UBERON:0005175!6.99e-07!1;UBERON:0003897!6.99e-07!1;UBERON:0001103!6.99e-07!1;UBERON:0010084!6.99e-07!1;UBERON:0005418!8.75e-07!1;UBERON:0001389!8.75e-07!1;UBERON:0000026!8.75e-07!1;UBERON:0008784!8.75e-07!1;UBERON:0006058!8.75e-07!1;UBERON:0003663!8.75e-07!1;UBERON:0001383!8.75e-07!1;UBERON:0004256!8.75e-07!1;UBERON:0002529!8.75e-07!1;UBERON:0004708!8.75e-07!1;UBERON:0002101!8.75e-07!1;UBERON:0004709!8.75e-07!1;UBERON:0003661!8.75e-07!1;UBERON:0002471!8.75e-07!1;UBERON:0004357!8.75e-07!1;UBERON:0009872!8.75e-07!1;UBERON:0004347!8.75e-07!1;UBERON:0005420!8.75e-07!1;UBERON:0005732!8.75e-07!1;UBERON:0006057!8.75e-07!1;UBERON:0000978!8.75e-07!1;UBERON:0002103!8.75e-07!1;UBERON:0001665!8.75e-07!1;UBERON:0003823!8.75e-07!1;UBERON:0000154!8.75e-07!1;UBERON:0005733!8.75e-07!1;UBERON:0005730!8.75e-07!1;UBERON:0001301!9.25e-07!1;UBERON:0001557!9.96e-07!19 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;1.44e-29;25!UBERON:0004151;1.59e-21;3!UBERON:0003978;2.67e-21;3!UBERON:0000946;2.67e-21;3!UBERON:0000948;1.54e-17;22!UBERON:0002079;5.53e-17;1!UBERON:0002146;6.47e-17;1!UBERON:0005623;6.47e-17;1!UBERON:0002084;1.41e-16;1!UBERON:0002082;1.41e-16;1!UBERON:0002135;2.63e-16;1!UBERON:0002081;3.71e-09;2!UBERON:0000341;5.94e-09;2!UBERON:0002133;8.09e-09;2!UBERON:0010313;4.81e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,2.35e-27,27;UBERON:0004151,1.43e-21,3;UBERON:0003978,2.96e-21,3;UBERON:0009751,2.96e-21,3;UBERON:0000946,2.96e-21,3;UBERON:0002523,2.96e-21,3;UBERON:0005983,2.96e-21,3;UBERON:0002165,2.96e-21,3;UBERON:0002062,2.96e-21,3;UBERON:0007280,2.96e-21,3;UBERON:0002079,5.53e-17,1;UBERON:0002146,6.47e-17,1;UBERON:0005623,6.47e-17,1;UBERON:0002084,1.21e-16,1;UBERON:0002082,1.21e-16,1;UBERON:0010226,1.21e-16,1;UBERON:0002135,3.07e-16,1;UBERON:0000948,4.39e-16,24;UBERON:0005498,4.39e-16,24;UBERON:0004140,4.39e-16,24;UBERON:0009881,4.39e-16,24;UBERON:0004141,4.39e-16,24;UBERON:0003084,4.39e-16,24;UBERON:0007005,4.39e-16,24;UBERON:0004139,4.39e-16,24;UBERON:0004291,4.39e-16,24;UBERON:0003103,8.78e-14,68;UBERON:0007023,4.75e-10,114;UBERON:0004797,1.13e-09,7;UBERON:0002081,3.71e-09,2;UBERON:0010227,3.71e-09,2;UBERON:0000341,5.08e-09,2;UBERON:0002133,8.74e-09,2;UBERON:0010313,4.96e-07,10;UBERON:0002342,4.96e-07,10;UBERON:0005062,4.96e-07,10 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.10833939483032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0,0.801288320820636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.432807638929335,0,0,0,0,0,0,0,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166211681900156,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0,0,0.451961481561065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11712960508902,7.56229399238556,0,0.798716001995964,4.29226048136571,1.33902874465124,12.8992267174514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,8.5763439164804,2.64836788146173,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,3.23333154505139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.992422356778588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0.647428837187895,2.56657017140618,2.3196288626764,0.971421986118279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.98527574661373,0.476128862927481,0.0645889098360061,0.0620747142958579,0,0,0,1.52401723527873,0.342233301085281,0.134704106029175,0,0.665320713092027,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p2@LRRC14B | |||
}} |
Revision as of 04:26, 22 January 2014
Short description: | p2@LRRC14B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_LRRC14B_5end |
Coexpression cluster: | C56_heart_left_umbilical_skeletal_penis_diaphragm_tongue |
Association with transcript: | 100bp_to_BC156515, BC172511_5end |
EntrezGene: | LRRC14B |
HGNC: | 37268 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 2.35e-27 | 27 |
cardiac chamber | 1.43e-21 | 3 |
valve | 2.96e-21 | 3 |
cardiac mesenchyme | 2.96e-21 | 3 |
cardial valve | 2.96e-21 | 3 |
tunica intima | 2.96e-21 | 3 |
heart layer | 2.96e-21 | 3 |
endocardium | 2.96e-21 | 3 |
endocardial cushion | 2.96e-21 | 3 |
presumptive endocardium | 2.96e-21 | 3 |
left cardiac atrium | 5.53e-17 | 1 |
pulmonary valve | 6.47e-17 | 1 |
semi-lunar valve | 6.47e-17 | 1 |
heart left ventricle | 1.21e-16 | 1 |
cardiac ventricle | 1.21e-16 | 1 |
future cardiac ventricle | 1.21e-16 | 1 |
mitral valve | 3.07e-16 | 1 |
heart | 4.39e-16 | 24 |
primitive heart tube | 4.39e-16 | 24 |
primary heart field | 4.39e-16 | 24 |
anterior lateral plate mesoderm | 4.39e-16 | 24 |
heart tube | 4.39e-16 | 24 |
heart primordium | 4.39e-16 | 24 |
cardiac mesoderm | 4.39e-16 | 24 |
cardiogenic plate | 4.39e-16 | 24 |
heart rudiment | 4.39e-16 | 24 |
compound organ | 8.78e-14 | 68 |
adult organism | 4.75e-10 | 114 |
blood vessel layer | 1.13e-09 | 7 |
cardiac atrium | 3.71e-09 | 2 |
future cardiac atrium | 3.71e-09 | 2 |
throat | 5.08e-09 | 2 |
atrioventricular valve | 8.74e-09 | 2 |
neural crest-derived structure | 4.96e-07 | 10 |
neural crest | 4.96e-07 | 10 |
neural fold | 4.96e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
heart disease | 4.34e-09 | 2 |