FFCP PHASE1:Hg19::chr5:146889741..146889755,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1809 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3015 | |||
|TSSclassifier=strong | |||
|UniProt=B3SXQ8,Q14195,Q6DEN2 | |||
|association_with_transcript=-122bp_to_ENST00000343218,NM_001197294_5end | |||
|description=CAGE_peak_12_at_DPYSL3_5end | |||
|id=chr5:146889741..146889755,- | |||
|ontology_enrichment_celltype=CL:0000055!4.36e-26!180;CL:0002321!2.35e-14!248;CL:0000220!9.39e-14!246;CL:0000222!4.78e-13!119;CL:0000393!4.83e-12!60;CL:0000211!4.83e-12!60;CL:0002319!1.79e-11!25;CL:0000133!2.99e-11!59;CL:0000187!3.21e-11!54;CL:0000183!3.60e-11!59;CL:0000680!3.22e-10!57;CL:0000056!3.22e-10!57;CL:0000355!3.22e-10!57;CL:0000192!4.38e-10!42;CL:0000514!4.38e-10!42;CL:0000057!6.26e-10!75;CL:0000095!7.10e-10!17;CL:0000123!7.10e-10!17;CL:0000333!1.56e-09!41;CL:0000243!4.29e-09!15;CL:0000125!4.29e-09!15;CL:0000030!4.29e-09!15;CL:0000339!4.29e-09!15;CL:0000221!7.37e-09!71;CL:0000359!2.41e-07!32 | |||
|ontology_enrichment_celltype_v019=CL:0002319;3.82e-12;25!CL:0000095;1.80e-10;17!CL:0000243;1.97e-10;15!CL:0000125;1.97e-10;15!CL:0000071;3.16e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,3.34e-14,250;CL:0000133,1.07e-13,59;CL:0002319,2.64e-12,25;CL:0000333,1.18e-11,41;CL:0000095,1.23e-10,17;CL:0000123,1.23e-10,17;CL:0000221,1.28e-10,72;CL:0000243,1.50e-10,15;CL:0000125,1.50e-10,15;CL:0000030,1.50e-10,15;CL:0000339,1.50e-10,15;CL:0000222,1.26e-09,121;CL:0000192,6.20e-08,43;CL:0000514,6.20e-08,43;CL:0000071,1.30e-07,18;CL:0002546,1.30e-07,18;CL:0000393,2.96e-07,61;CL:0000211,2.96e-07,61;CL:0000359,7.94e-07,32 | |||
|ontology_enrichment_development_v019=CL:0000339;1.97e-10;15!CL:0000133;1.17e-07;59!CL:0002546;3.16e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2394;4.39e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,5.53e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0002049!2.16e-17!79;UBERON:0007798!2.16e-17!79;UBERON:0004872!5.86e-16!84;UBERON:0000483!1.26e-15!309;UBERON:0000119!1.42e-15!312;UBERON:0001981!2.27e-15!60;UBERON:0007500!2.27e-15!60;UBERON:0004537!2.27e-15!60;UBERON:0006965!2.27e-15!60;UBERON:0000468!2.41e-14!659;UBERON:0000055!5.10e-14!69;UBERON:0000477!1.21e-13!286;UBERON:0004535!5.70e-13!110;UBERON:0000467!7.95e-13!625;UBERON:0000922!8.54e-13!612;UBERON:0000480!1.26e-12!626;UBERON:0001009!1.84e-12!113;UBERON:0003914!2.44e-12!118;UBERON:0000475!2.73e-12!365;UBERON:0004111!6.15e-12!241;UBERON:0000490!9.59e-12!138;UBERON:0002050!3.58e-11!605;UBERON:0005423!3.58e-11!605;UBERON:0000481!4.35e-11!347;UBERON:0000923!6.53e-11!604;UBERON:0005291!6.53e-11!604;UBERON:0006598!6.53e-11!604;UBERON:0002532!6.53e-11!604;UBERON:0001637!8.57e-11!42;UBERON:0003509!8.57e-11!42;UBERON:0004572!8.57e-11!42;UBERON:0005256!1.31e-10!143;UBERON:0000914!1.82e-10!83;UBERON:0002329!1.82e-10!83;UBERON:0003077!1.82e-10!83;UBERON:0003059!1.82e-10!83;UBERON:0007282!1.82e-10!83;UBERON:0009618!1.82e-10!83;UBERON:0007285!1.82e-10!83;UBERON:0000025!2.42e-10!194;UBERON:0004290!2.51e-10!70;UBERON:0000924!2.56e-10!173;UBERON:0006601!2.56e-10!173;UBERON:0002385!2.97e-10!63;UBERON:0001015!2.97e-10!63;UBERON:0000383!2.97e-10!63;UBERON:0004121!3.70e-10!169;UBERON:0001134!6.21e-10!61;UBERON:0002036!6.21e-10!61;UBERON:0003082!6.21e-10!61;UBERON:0000486!1.11e-08!82;UBERON:0004573!5.10e-08!33;UBERON:0004571!5.10e-08!33;UBERON:0000033!2.99e-07!123 | |||
|ontology_enrichment_uberon_v019=UBERON:0007500;2.04e-09;56!UBERON:0001981;2.04e-09;56!UBERON:0004537;2.04e-09;56!UBERON:0001637;6.48e-08;42!UBERON:0003509;6.48e-08;42!UBERON:0004572;6.48e-08;42!UBERON:0000055;1.36e-07;65!UBERON:0000487;1.70e-07;22!UBERON:0003914;2.10e-07;74!UBERON:0000970;2.55e-07;20!UBERON:0006914;2.59e-07;25!UBERON:0004638;3.16e-07;18!UBERON:0001986;3.16e-07;18!UBERON:0004852;3.16e-07;18!UBERON:0004573;3.58e-07;33!UBERON:0004571;3.58e-07;33!UBERON:0001801;3.65e-07;14!UBERON:0002049;4.40e-07;75!UBERON:0007798;4.40e-07;75!UBERON:0000490;5.43e-07;33!UBERON:0000020;8.06e-07;23!UBERON:0002104;8.57e-07;21!UBERON:0000019;8.64e-07;19!UBERON:0000047;8.64e-07;19!UBERON:0004088;8.64e-07;19!UBERON:0010230;8.64e-07;19!UBERON:0001638;8.68e-07;9!UBERON:0003920;8.68e-07;9!UBERON:0004582;8.68e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007500,8.13e-16,59;UBERON:0001981,8.13e-16,59;UBERON:0004537,8.13e-16,59;UBERON:0006965,8.13e-16,59;UBERON:0004872,1.15e-14,83;UBERON:0002049,2.51e-14,78;UBERON:0007798,2.51e-14,78;UBERON:0000055,3.09e-13,68;UBERON:0003914,2.10e-12,117;UBERON:0004535,4.02e-11,109;UBERON:0001637,1.26e-10,42;UBERON:0003509,1.26e-10,42;UBERON:0004572,1.26e-10,42;UBERON:0001009,1.92e-10,112;UBERON:0000490,4.68e-09,148;UBERON:0000025,7.64e-09,192;UBERON:0000483,1.02e-08,306;UBERON:0004111,1.13e-08,240;UBERON:0000119,2.10e-08,309;UBERON:0004573,2.42e-08,33;UBERON:0004571,2.42e-08,33;UBERON:0000487,5.26e-08,22;UBERON:0006914,8.68e-08,25;UBERON:0004638,1.30e-07,18;UBERON:0001986,1.30e-07,18;UBERON:0004852,1.30e-07,18;UBERON:0000922,2.81e-07,592;UBERON:0001801,5.71e-07,14;UBERON:0001638,8.75e-07,9;UBERON:0003920,8.75e-07,9;UBERON:0004582,8.75e-07,9 | |||
|phase1_expression=0,0.214100523890983,0.422863212287913,0,0,2.61701557230111,0,0,0,1.96587149201207,0,0.655324116390517,0.527533956456907,0.495065411840187,0,2.6893005858071,0,0,1.95173119516203,2.21617904538218,1.83600622119828,2.5076377718247,3.43483184557268,2.73748850145768,2.00868223351684,0,0,0,0,0,0,1.83884244895785,2.10844143144775,0,0,0,0.587200878669695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0,0.56738522469114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01210257911091,1.15076305659177,1.0843174571537,0.50133791063589,0.579386075843295,0,0.973269740605272,3.02511414925017,2.66075276955077,2.98638271356629,0.261958150995425,1.09288586487763,1.11235332835329,0,0,0,0,0,0,2.78267370313387,1.72046919021225,1.38856200643038,0.56530794192401,0.838998872419812,1.10047216776027,2.08994966536811,0.516833518338658,0,0.33472061276467,1.61131726843659,0,0,1.47065232138347,1.62028389576352,2.23249320710199,0.673588117878509,2.13961812918312,3.06633274931766,3.79706263827252,1.64881569537367,0,0,0,0.496971951695318,1.51956613997496,0.132409180813219,0.860509862246441,1.06400514659507,0.560677600142307,1.06748995729705,0.24666754841716,0.622422070799533,1.34710672069688,0.980771418680752,0.454072282934794,0.576175924479999,4.45210720484214,0.312160076830321,0.570471821544449,0.149448680551801,1.29177948508141,0.323745888736263,0.702254033511242,0.408308342509787,2.08818339430006,0.309977343527296,3.56400857184616,1.7308685049499,3.64064544775211,0,1.17835279767846,1.00094815897571,1.10825646193673,0.438977620880838,0.612975591598039,0.751190294532984,2.04177929688038,0.538168907066586,0.213557388818567,0.211931901159562,0.900273288253207,1.44273540933814,0.515281080091258,0.18611685633159,0.337552664482532,0.779496041289589,0.504867548488229,0.184099797284599,0.484938170456436,1.06502877754984,0.403008392910561,1.01736355386293,0.966304265816484,0.272746120590835,0,1.95157929807353,1.32529768321485,1.16193942869518,1.34759371519982,0.252320850875628,1.09493207722749,1.56449532329816,0.643240938192885,0,0,0,0.118306800039844,0.505754070234305,0,0.441175890929576,0.217879444092406,0,0.404493924480493,0,0,1.4763109092493,1.40241773803446,0.4115740113314,2.94017422771084,0,0,0,0,0,1.02940686179115,0,0,0.100528972411631,0.370353780634118,1.62904152655162,3.11980435583874,0,2.43453850447661,1.6437217193015,0.144366447761074,0.462985512576611,0.570762456703795,0,0,0,0,0,0,0.335964256397719,0.283550194484773,0.179117045405697,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0.205654985406647,0,0,0.560655421726804,0,0.4400297149257,0.775630294546667,0,1.690605505112,0.531876233169741,1.04007436911366,0.257207374262142,0,0.799266537048298,0,0.542621605391443,0,0.65147236858747,0.355391948742546,0.791951872933429,1.50719688529793,0.871533458600294,1.3996218765488,0,0,0,0.239624855491583,0,1.42636905040718,0,0,0.537182889719687,0,0,0,0,2.54094624222463,3.90419561572865,0.773288812777695,3.01529277601828,0,0,0,0,0.36807447515742,1.00034104211935,0.271265023699736,0,0.356857977594324,0.157702415033935,0.234282829985426,1.20378439891088,0,0,1.32845119707087,0.737476674166813,0.60818530127658,0,0,0,0,0,0,1.66435439510497,0.30239029332968,0,0,0,0.384417447767103,0,0.64341568457443,1.48418066444991,2.15893571323718,1.42049380250502,1.31403449622095,3.11552657510173,0.813472649219715,0,0.40101294060657,0.0920809889358963,1.49258782613989,1.82091168006717,0.393373244878272,1.35359883872224,0.308061348417659,0.784349769176855,1.46139224653261,0.73886140225013,0,1.36074964221213,3.23873874153209,0,2.16757150035082,1.00337954770971,0.509752546090077,0,1.11937377361089,0.219259876645935,0,0.256450125116389,0.328014645699706,0,0.309123034943167,0.54941678891006,0.495056999523528,0,0,3.21367859688319,0.290012154876366,0.616194468458578,0.767518373630648,0.964856007391714,0.107420244868274,0.725083469571143,0.767039646744908,0.623224249527161,0.165284915360978,0,0.127612712494584,0,0.929691098594572,0.62962469366128,0,2.7723022215848,1.59691809095107,2.60979897622522,1.11194531462352,1.28812398067792,0.372158369359667,1.2655176988749,0.762520775695299,0.767693373934002,0.42793898803392,1.59101623962968,4.70969184119538,0.899362287916574,1.64722217841633,1.06031162111118,1.41527737101321,1.58510321173008,1.26377536871694,2.43816869544795,0.731140468893853,0,1.36499911407986,1.27264888758341,4.52032466480971,0.551365343546124,1.32687795048244,0.438450885253763,0.578775534266688,1.31178950409327,1.21746226177622,0.30982349809975,1.97186921772569,1.14729081763241,1.57198465620994,0.7133421029625,0.709522128141196,0.422215270595328,3.29294892959902,0.75894634753143,0.699869440489966,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0.284136146806413,0.23874448473769,0.296964680832639,0.921482106297696,0,0.140669416410513,1.66963057534359,0,0,1.59398390600856,0.828851746593443,0,0.409074730008619,0,0,0,0,0,1.1837208676432,0,0,0.969332746095218,0.463840490809256,5.98841394003583,0,0,0.724999575434793,0.455173793141999,0,0,2.06846023944879,4.66567381413207,5.90324982773194,0,0.723578631752448,0,0,0,0,0,0.41827123283581,1.38510465306835,1.25336261431701,0,0,0,0.31900115973192,1.00757352742049,0,0,0,0,0,0,0,0,0,2.10998064528027,0,0,0,0,0.353830258013357,0,0.296521128680622,0.617819694732514,1.04421949505455,0.943615861729479,0.802577647298789,0.234264445725339,0,0,0,1.97292201424695,0,4.89716418608784,0.568679216656392,0.60129367765797,1.45163467956146,0,0.661983911750998,0.627865836814451,2.38944859545918,0,0,0,0,0,0.34945333648406,0,0,0,0,1.06687918137261,0,1.80784592624426,2.19267079434801,0.19871461170299,0.316553979779393,0.195551382734803,1.28254112402454,1.92107695265417,1.19885765749278,0.288180834308212,0,0,0,0.124252535565433,0,5.16435983079733,4.60252523774266,1.52997326454483,0.866851769704557,0,0.136905378891993,0,4.72741985561953,0,1.95497680890578,0.916641696046735,0.717873024576814,0.199679000498991,0,0.223171457441873,0.201550417460179,0.720599767084807,0,0,0,0,0.0984274815147488,0,0,0.681017030557878,1.28602518772015,1.37539436597234,0.415440338029185,0,0,0.121499113316049,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,0,0,1.30634944043764,1.19730191562487,0,0.511164065356265,0.79318464064088,0,0,0.646414781807753,0.26446520348538,0,0,0.320362237703084,0,0.414239055347196,0,0,0,0,0,0.5013797880454,0,0,3.14108192500469,0,0.122026264901963,0.3755727921195,1.14681839138014,0.332787154610557,0.807253238237985,2.62862406378839,1.12482367165896,0.151649117541648,0.285465333544967,1.17632909849086,0.936669811613763,2.75349954360568,1.64180283175561,0.701139929541673,2.21922344601045,0.757612021100357,1.0062716070103,0,0.228840068396924,1.36107831386915,2.33155800874171,1.03498604992744,3.02663857611035,0.449803112163605,2.79473322377267,6.22059311761283,1.59505028734797,2.08698024724694,2.55437935295271,1.14241563650639,2.84809513243263,2.00033525122815,2.57785336901972,0.464033759878494,1.19428766609585,2.40016658797892,0,0.673498977531838,0,6.54907423384831,0.643324774124777,0.260994291965212,1.36023555307363,1.62065732026684,0,0,0,0.877136198314828,0,0,0.844712203265363,0,0,0,0.414775308455192,0,0,0,2.29326894192489,0,0.211312123358627,0,0.213383459388282,0,0,0.552317850755522,0,0,2.17420431216208,3.45039396469382,0.471797825567689,4.6960144422566,0.678930119816101,1.06287460050841,0,1.67593475391973,1.59002175326709,0,4.80342448971282,0.352675943690684,0.6124909547064,0.0642292250964595,0,0.319267718114302,0,2.52071696221718,0,0.161475645631851,0,0,0.11796972334774,0,0,1.1441462864015,0.690359926060101,0.795664888465099,2.632361492224,0.20170506870352,0,0,0,0,0.202612753855184,0,0.206686796501184,0.126831620387814,3.28184885410932,0,0,0.527613733078862,0.127762427639595,0,0.336283722218824,0.606965604236632,0.227662191351298,0.0887023701626388,0,0.342976018874837,0.271878931907327,0.0657727735628491,1.53651993149159,0.444925607568277,0.863424021355654,0.157115589916002,0,0,0,0,1.21510125100316,4.42438112851634,0,0.347716544605159,0.801711364730253,0,0,0.691259661814092,0,0.828324005113957,1.19298766662821,0.846774100381858,0,0.31020638566432,2.8666168169323,0,0,0.121917924982269,0.647428837187895,0.205325613712494,0,0,6.08242605001475,0,0,7.22854925049344,0.329821550236287,3.17021971490014,0.154348316215889,0.655678681511872,2.35158648180761,2.45148321753905,1.17838273550813,0.392616934229891,0,1.2679671827502,0.169927114687817,0.563903507879121,0.966868319603658,0,0.178553938605658,0,0,0,0,0,0,0.203974470572744,3.49080552272302,0,0.371995018166751,0.462175628631418,1.29787968637137,0.883164973845552,1.20192129160065,0,0.509944148709909,0.26721740526556,0,0,0.151557396436479,0.267964130156178,0,0.20686599172379,0.639701945702943,0.23806443146374,0,0.124149428591716,1.34558235096736,0,0.606351566874658,0.217716747896961,1.02669990325584,0.336760265072938,0.78894425931944,2.66128285236811,0.732629417498771,0.213454691755431,0,0.0898252021065869,0,1.22241444182866,1.22068853494722,0,1.20764276154616,0 | |||
|short_description=p12@DPYSL3 | |||
}} |
Revision as of 08:09, 22 January 2014
Short description: | p12@DPYSL3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_DPYSL3_5end |
Coexpression cluster: | NA |
Association with transcript: | -122bp_to_ENST00000343218, NM_001197294_5end |
EntrezGene: | DPYSL3 |
HGNC: | 3015 |
UniProt: | B3SXQ8Q14195Q6DEN2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 3.34e-14 | 250 |
neurectodermal cell | 1.07e-13 | 59 |
neural cell | 2.64e-12 | 25 |
migratory neural crest cell | 1.18e-11 | 41 |
neuron associated cell | 1.23e-10 | 17 |
neuron associated cell (sensu Vertebrata) | 1.23e-10 | 17 |
ectodermal cell | 1.28e-10 | 72 |
glial cell (sensu Vertebrata) | 1.50e-10 | 15 |
glial cell | 1.50e-10 | 15 |
glioblast | 1.50e-10 | 15 |
glioblast (sensu Vertebrata) | 1.50e-10 | 15 |
mesodermal cell | 1.26e-09 | 121 |
smooth muscle cell | 6.20e-08 | 43 |
smooth muscle myoblast | 6.20e-08 | 43 |
blood vessel endothelial cell | 1.30e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.30e-07 | 18 |
electrically responsive cell | 2.96e-07 | 61 |
electrically active cell | 2.96e-07 | 61 |
vascular associated smooth muscle cell | 7.94e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
epithelial tube open at both ends | 8.13e-16 | 59 |
blood vessel | 8.13e-16 | 59 |
blood vasculature | 8.13e-16 | 59 |
vascular cord | 8.13e-16 | 59 |
splanchnic layer of lateral plate mesoderm | 1.15e-14 | 83 |
vasculature | 2.51e-14 | 78 |
vascular system | 2.51e-14 | 78 |
vessel | 3.09e-13 | 68 |
epithelial tube | 2.10e-12 | 117 |
cardiovascular system | 4.02e-11 | 109 |
artery | 1.26e-10 | 42 |
arterial blood vessel | 1.26e-10 | 42 |
arterial system | 1.26e-10 | 42 |
circulatory system | 1.92e-10 | 112 |
unilaminar epithelium | 4.68e-09 | 148 |
tube | 7.64e-09 | 192 |
epithelium | 1.02e-08 | 306 |
anatomical conduit | 1.13e-08 | 240 |
cell layer | 2.10e-08 | 309 |
systemic artery | 2.42e-08 | 33 |
systemic arterial system | 2.42e-08 | 33 |
simple squamous epithelium | 5.26e-08 | 22 |
squamous epithelium | 8.68e-08 | 25 |
blood vessel endothelium | 1.30e-07 | 18 |
endothelium | 1.30e-07 | 18 |
cardiovascular system endothelium | 1.30e-07 | 18 |
embryo | 2.81e-07 | 592 |
anterior segment of eyeball | 5.71e-07 | 14 |
vein | 8.75e-07 | 9 |
venous blood vessel | 8.75e-07 | 9 |
venous system | 8.75e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 5.53e-08 | 14 |