FFCP PHASE1:Hg19::chr5:178977546..178977568,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=80230 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19760 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000319449_5end | |||
|description=CAGE_peak_1_at_RUFY1_5end | |||
|id=chr5:178977546..178977568,+ | |||
|ontology_enrichment_celltype=CL:0000037!2.45e-34!172;CL:0000566!2.45e-34!172;CL:0002032!1.87e-33!165;CL:0000837!1.87e-33!165;CL:0000763!1.34e-31!112;CL:0000049!1.34e-31!112;CL:0000988!2.56e-28!182;CL:0000738!1.16e-25!140;CL:0002031!6.00e-23!124;CL:0000557!2.94e-22!71;CL:0000766!3.54e-22!76;CL:0000839!3.90e-22!70;CL:0002087!5.60e-22!119;CL:0002194!1.25e-20!63;CL:0000576!1.25e-20!63;CL:0000040!1.25e-20!63;CL:0000559!1.25e-20!63;CL:0002009!1.27e-20!65;CL:0002057!1.43e-15!42;CL:0000860!5.33e-15!45;CL:0000134!1.03e-08!358;CL:0002320!2.40e-08!365 | |||
|ontology_enrichment_celltype_v019=CL:0000576;1.85e-12;48!CL:0000473;3.05e-12;39!CL:0000234;3.05e-12;39!CL:0000766;3.54e-11;69!CL:0000860;5.12e-11;33!CL:0002057;5.12e-11;33!CL:0000763;1.13e-10;100!CL:0000738;6.00e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,5.34e-35,168;CL:0002032,3.91e-34,161;CL:0000837,3.91e-34,161;CL:0000763,1.28e-32,108;CL:0000049,1.28e-32,108;CL:0000988,2.59e-29,177;CL:0000738,2.67e-26,136;CL:0002031,1.32e-23,120;CL:0000557,1.91e-23,67;CL:0000839,2.46e-23,66;CL:0000766,2.82e-23,72;CL:0002087,1.23e-22,115;CL:0002194,7.00e-22,59;CL:0000576,7.00e-22,59;CL:0000040,7.00e-22,59;CL:0000559,7.00e-22,59;CL:0002009,7.86e-22,61;CL:0000473,7.83e-19,48;CL:0000234,7.83e-19,48;CL:0000860,1.43e-15,42;CL:0002057,1.43e-15,42;CL:0000134,8.46e-09,354;CL:0002320,2.00e-08,361 | |||
|ontology_enrichment_development_v019=CL:0002057;1.44e-11;42!CL:0000049;7.70e-10;108 | |||
|ontology_enrichment_disease=DOID:1240!1.07e-08!39;DOID:8692!1.41e-08!31;DOID:2531!1.22e-07!51;DOID:0060083!1.22e-07!51 | |||
|ontology_enrichment_disease_v019=DOID:8692;1.85e-08;31!DOID:1240;9.69e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:1240,1.07e-08,39;DOID:8692,1.41e-08,31;DOID:2531,1.22e-07,51;DOID:0060083,1.22e-07,51 | |||
|ontology_enrichment_uberon=UBERON:0002193!3.13e-23!112;UBERON:0002390!8.43e-23!102;UBERON:0003061!8.43e-23!102;UBERON:0002371!9.30e-20!80;UBERON:0002405!2.40e-19!115;UBERON:0001474!1.00e-18!86;UBERON:0004765!1.74e-15!101;UBERON:0001434!1.74e-15!101;UBERON:0007023!2.70e-09!115;UBERON:0002384!7.42e-08!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,5.60e-24,108;UBERON:0002390,1.29e-23,98;UBERON:0003061,1.29e-23,98;UBERON:0002405,9.01e-23,93;UBERON:0002371,1.12e-20,76;UBERON:0001474,1.58e-19,82;UBERON:0004765,9.76e-18,90;UBERON:0001434,9.22e-16,100;UBERON:0007023,3.45e-09,114;UBERON:0002384,6.27e-08,371 | |||
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| |||
|short_description=p1@RUFY1 | |||
}} |
Revision as of 09:24, 22 January 2014
Short description: | p1@RUFY1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RUFY1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000319449_5end |
EntrezGene: | RUFY1 |
HGNC: | 19760 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 5.34e-35 | 168 |
hematopoietic oligopotent progenitor cell | 3.91e-34 | 161 |
hematopoietic multipotent progenitor cell | 3.91e-34 | 161 |
myeloid cell | 1.28e-32 | 108 |
common myeloid progenitor | 1.28e-32 | 108 |
hematopoietic cell | 2.59e-29 | 177 |
leukocyte | 2.67e-26 | 136 |
hematopoietic lineage restricted progenitor cell | 1.32e-23 | 120 |
granulocyte monocyte progenitor cell | 1.91e-23 | 67 |
myeloid lineage restricted progenitor cell | 2.46e-23 | 66 |
myeloid leukocyte | 2.82e-23 | 72 |
nongranular leukocyte | 1.23e-22 | 115 |
monopoietic cell | 7.00e-22 | 59 |
monocyte | 7.00e-22 | 59 |
monoblast | 7.00e-22 | 59 |
promonocyte | 7.00e-22 | 59 |
macrophage dendritic cell progenitor | 7.86e-22 | 61 |
defensive cell | 7.83e-19 | 48 |
phagocyte | 7.83e-19 | 48 |
classical monocyte | 1.43e-15 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.43e-15 | 42 |
mesenchymal cell | 8.46e-09 | 354 |
connective tissue cell | 2.00e-08 | 361 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 5.60e-24 | 108 |
hematopoietic system | 1.29e-23 | 98 |
blood island | 1.29e-23 | 98 |
immune system | 9.01e-23 | 93 |
bone marrow | 1.12e-20 | 76 |
bone element | 1.58e-19 | 82 |
skeletal element | 9.76e-18 | 90 |
skeletal system | 9.22e-16 | 100 |
adult organism | 3.45e-09 | 114 |
connective tissue | 6.27e-08 | 371 |
Ontology term | p-value | n |
---|---|---|
leukemia | 1.07e-08 | 39 |
myeloid leukemia | 1.41e-08 | 31 |
hematologic cancer | 1.22e-07 | 51 |
immune system cancer | 1.22e-07 | 51 |