FFCP PHASE1:Hg19::chr6:31698612..31698640,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_CU687893_5end | |||
|description=CAGE_peak_1_at_CU687893_5end | |||
|id=chr6:31698612..31698640,+ | |||
|ontology_enrichment_celltype=CL:0000548!1.30e-19!679;CL:0000004!1.30e-19!679;CL:0000255!1.30e-19!679;CL:0000144!2.11e-19!625;CL:0000012!5.23e-19!682;CL:0002371!6.66e-19!591;CL:0000003!3.60e-15!722;CL:0000222!3.73e-14!119;CL:0000183!5.52e-10!59;CL:0000063!5.32e-09!578;CL:0000220!1.05e-08!246;CL:0002321!2.68e-08!248;CL:0000192!3.75e-08!42;CL:0000514!3.75e-08!42;CL:0000680!5.46e-08!57;CL:0000056!5.46e-08!57;CL:0000355!5.46e-08!57;CL:0000187!6.11e-08!54;CL:0000048!6.21e-08!430;CL:0000723!1.86e-07!436;CL:0000055!2.10e-07!180;CL:0000359!2.16e-07!32;CL:1000497!6.07e-07!18;CL:0002518!6.07e-07!18;CL:0000034!6.90e-07!444 | |||
|ontology_enrichment_celltype_v019=CL:1000449;4.05e-08;15!CL:0002681;7.11e-08;12!CL:0002584;7.11e-08;12!CL:1000497;9.86e-08;17!CL:0002518;9.86e-08;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,2.89e-15,121;CL:1000449,3.32e-08,15;CL:0000213,3.37e-08,58;CL:0000215,3.37e-08,58;CL:1000497,4.97e-08,17;CL:0002518,4.97e-08,17;CL:0000192,5.82e-08,43;CL:0000514,5.82e-08,43;CL:0002681,9.27e-08,12;CL:0002584,9.27e-08,12;CL:0000359,1.65e-07,32;CL:0000187,2.61e-07,55;CL:0000680,4.62e-07,58;CL:0000056,4.62e-07,58;CL:0000355,4.62e-07,58;CL:0002321,5.97e-07,250 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!1.27e-11!216;UBERON:0000926!4.02e-10!448;UBERON:0004120!4.02e-10!448;UBERON:0006603!4.02e-10!448;UBERON:0005256!1.83e-09!143;UBERON:0001637!2.15e-09!42;UBERON:0003509!2.15e-09!42;UBERON:0004572!2.15e-09!42;UBERON:0001981!2.91e-09!60;UBERON:0007500!2.91e-09!60;UBERON:0004537!2.91e-09!60;UBERON:0006965!2.91e-09!60;UBERON:0000486!1.20e-08!82;UBERON:0004290!1.23e-08!70;UBERON:0002204!1.51e-08!167;UBERON:0000055!3.09e-08!69;UBERON:0003914!3.24e-08!118;UBERON:0000914!5.37e-08!83;UBERON:0002329!5.37e-08!83;UBERON:0003077!5.37e-08!83;UBERON:0003059!5.37e-08!83;UBERON:0007282!5.37e-08!83;UBERON:0009618!5.37e-08!83;UBERON:0007285!5.37e-08!83;UBERON:0002049!8.02e-08!79;UBERON:0007798!8.02e-08!79;UBERON:0000353!2.48e-07!17;UBERON:0001134!6.68e-07!61;UBERON:0002036!6.68e-07!61;UBERON:0003082!6.68e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0000353;1.76e-08;15!UBERON:0006555;4.05e-08;15!UBERON:0004819;4.05e-08;15!UBERON:0001285;4.05e-08;15!UBERON:0007684;4.05e-08;15!UBERON:0001225;7.11e-08;12!UBERON:0008987;7.11e-08;12!UBERON:0003513;4.03e-07;7!UBERON:0003914;5.06e-07;74 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,4.18e-12,78;UBERON:0001637,8.94e-10,42;UBERON:0003509,8.94e-10,42;UBERON:0004572,8.94e-10,42;UBERON:0002329,5.00e-09,71;UBERON:0003059,5.00e-09,71;UBERON:0007282,5.00e-09,71;UBERON:0004290,5.00e-09,71;UBERON:0009618,5.00e-09,71;UBERON:0007500,5.57e-09,59;UBERON:0001981,5.57e-09,59;UBERON:0004537,5.57e-09,59;UBERON:0006965,5.57e-09,59;UBERON:0007524,6.27e-09,73;UBERON:0003914,6.46e-09,117;UBERON:0000926,7.18e-09,315;UBERON:0004120,7.18e-09,315;UBERON:0006603,7.18e-09,315;UBERON:0003077,9.81e-09,72;UBERON:0007285,9.81e-09,72;UBERON:0000353,1.68e-08,15;UBERON:0000486,2.05e-08,83;UBERON:0000055,2.60e-08,68;UBERON:0003104,2.93e-08,160;UBERON:0009142,2.93e-08,160;UBERON:0004211,3.32e-08,15;UBERON:0009773,3.32e-08,15;UBERON:0001231,3.32e-08,15;UBERON:0001285,3.32e-08,15;UBERON:0007684,3.32e-08,15;UBERON:0004208,3.32e-08,15;UBERON:0005256,3.50e-08,122;UBERON:0000490,6.66e-08,148;UBERON:0003081,8.58e-08,203;UBERON:0001225,9.27e-08,12;UBERON:0008987,9.27e-08,12;UBERON:0003513,1.34e-07,7;UBERON:0002049,1.47e-07,78;UBERON:0007798,1.47e-07,78;UBERON:0006555,1.99e-07,16;UBERON:0004819,1.99e-07,16;UBERON:0002100,4.11e-07,199 | |||
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| |||
|short_description=p1@CU687893 | |||
}} |
Revision as of 11:06, 22 January 2014
Short description: | p1@CU687893 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CU687893_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_CU687893_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 2.89e-15 | 121 |
epithelial cell of nephron | 3.32e-08 | 15 |
lining cell | 3.37e-08 | 58 |
barrier cell | 3.37e-08 | 58 |
kidney cell | 4.97e-08 | 17 |
kidney epithelial cell | 4.97e-08 | 17 |
smooth muscle cell | 5.82e-08 | 43 |
smooth muscle myoblast | 5.82e-08 | 43 |
kidney cortical cell | 9.27e-08 | 12 |
renal cortical epithelial cell | 9.27e-08 | 12 |
vascular associated smooth muscle cell | 1.65e-07 | 32 |
muscle cell | 2.61e-07 | 55 |
muscle precursor cell | 4.62e-07 | 58 |
myoblast | 4.62e-07 | 58 |
multi-potent skeletal muscle stem cell | 4.62e-07 | 58 |
embryonic cell | 5.97e-07 | 250 |