FFCP PHASE1:Hg19::chr6:33265442..33265484,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5863 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9769 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000485077_5end | |||
|description=CAGE_peak_2_at_RGL2_5end | |||
|id=chr6:33265442..33265484,- | |||
|ontology_enrichment_celltype=CL:0000066!2.92e-12!254;CL:0000223!1.53e-10!59;CL:0002076!1.33e-09!43 | |||
|ontology_enrichment_celltype_v019=CL:0002076;3.55e-10;42!CL:0000451;1.08e-07;10!CL:0002251;3.66e-07;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,5.41e-16,253;CL:0000223,1.57e-14,58;CL:0002076,9.90e-13,42;CL:0000451,5.67e-08,10;CL:0002251,2.54e-07,20 | |||
|ontology_enrichment_development_v019=CL:0000223;3.15e-08;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000922!1.66e-18!612;UBERON:0000468!2.87e-18!659;UBERON:0002050!1.26e-15!605;UBERON:0005423!1.26e-15!605;UBERON:0000923!2.70e-15!604;UBERON:0005291!2.70e-15!604;UBERON:0006598!2.70e-15!604;UBERON:0002532!2.70e-15!604;UBERON:0000467!1.51e-14!625;UBERON:0000480!2.75e-14!626;UBERON:0000062!2.05e-12!511;UBERON:0004119!1.39e-08!169;UBERON:0000925!1.39e-08!169;UBERON:0006595!1.39e-08!169;UBERON:0007023!4.65e-07!115;UBERON:0000161!5.27e-07!35 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000922,1.24e-10,592;UBERON:0004119,2.16e-10,160;UBERON:0000925,2.16e-10,160;UBERON:0006595,2.16e-10,160;UBERON:0005423,1.23e-08,581;UBERON:0005631,2.19e-08,14;UBERON:0000158,2.19e-08,14;UBERON:0002050,7.01e-08,564;UBERON:0001007,3.06e-07,145;UBERON:0001555,3.06e-07,145;UBERON:0007026,3.06e-07,145;UBERON:0000923,3.62e-07,560;UBERON:0010316,3.62e-07,560;UBERON:0005291,3.62e-07,560;UBERON:0006598,3.62e-07,560;UBERON:0010317,3.62e-07,560;UBERON:0002532,3.62e-07,560;UBERON:0004921,4.24e-07,118;UBERON:0003124,7.72e-07,7;UBERON:0000161,7.86e-07,36 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,4.17747692052565,20.9340350391728,10.2667444901181,16.6173196283926,1.36142988256051,0.331397375727916,0,0,0.730310090387373,0,1.96993692922861,0.612002073732759,0.626909442956176,0.572471974262113,0.821246550437305,0.502170558379211,0,0,0.157421562627358,0.786728553697808,0,1.08371286321253,3.67768489791571,4.819294700452,4.43704812200145,0,0,0.293600439334847,0,0.601633342410425,1.30206522429511,10.5240272892764,3.88672399222775,9.01514486719653,1.74477886535478,3.40088349319928,1.69808842831471,1.39457422143411,2.05583944010913,0.619412741790207,0.28769239232215,1.2808035326455,0,0.689491361473237,1.29096936716765,1.35426486594342,1.31769637679823,1.36453075028923,0.449446968890169,1.22433556948361,0.320929027076094,3.19668562899521,0.989553900560148,0.398927315243264,1.27867425159808,0.870627715885752,1.13477044938228,0.622822248995575,0.75374599577023,1.0429658368404,0.65156653411535,1.21079900526674,1.10483290796269,0.632924774881769,0.211255286311942,0.212604299965044,0.209658645508376,1.01095768031846,1.95229960693958,1.28580469357664,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.58030450865046,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0.127986611154418,0,0,0,0,0,0,0,1.34140171940727,0.255725123687061,0,0,0.289693037921647,0,0.486634870302636,1.51255707462509,1.55210578223795,1.49319135678314,1.70272798147026,11.2931539370688,10.381964397964,28.5601706416121,27.5124984932842,32.9735742086786,13.1169843367938,10.2959083940423,8.91498003190956,0.39752481473341,1.72046919021225,0.347140501607594,0.56530794192401,2.51699661725944,1.6507082516404,0.417989933073621,3.10100111003195,2.49036383880697,0.66944122552934,1.20848795132744,2.28081631715554,0.976248230192678,1.10298924103761,0,0.803697554556718,0.673588117878509,0.788280363383256,1.53316637465883,0.949265659568129,0.549605231791222,0,0,7.84969293856562,0,0.506522046658319,0.662045904066094,1.72101972449288,0.354668382198357,0.560677600142307,0,0.74000264525148,0.933633106199299,0.269421344139376,0.490385709340376,0.756787138224657,1.15235184896,0.70296429550139,1.24864030732128,1.1409436430889,0,0,0.161872944368132,0.561803226808994,0.204154171254893,0.368502951935304,0.413303124703062,1.18800285728205,0,0,0,0.336672227908132,0,0,0,0,0.150238058906597,0.226864366320042,0.89694817844431,0.213557388818567,0.211931901159562,0.300091096084402,0,0.515281080091258,0,0,0,0.757301322732344,0,0.323292113637624,0,0.302256294682921,0.169560592310488,6.1843473012255,2.18196896472668,5.16248271700207,7.80631719229411,8.0843158676106,7.55260628651869,7.3599349060913,11.8590799911545,7.66452454059243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21446636387394,2.80483547606892,0,0,5.07020139287323,4.91413608338813,4.13552934676983,0,11.6839016615958,1.54411029268673,9.8775256867763,5.62008766288098,3.41798506199545,3.33318402570707,0.977424915930974,2.07986957055916,0,1.73895607462615,0.469634776943287,1.29929802984966,0,0.761016608938393,37.9298111020452,29.1885295112257,6.64785916435973,3.51006397708857,8.02608276359133,1.87467667973554,1.84780341018745,1.55952606966625,0.716468181622786,2.03443756959773,1.53353071666084,0.492663237895943,0,0.207328115540772,0.288239906833923,0.6312121671319,0.190493682876507,0,1.17217447210047,0,0.102827492703324,1.20137223137567,0.285826432630578,0.448524337381443,0.43596006883328,0,0.258543431515556,0,0,0,0,1.02882949704857,0,0.532844358032199,0,0,0.823240336780769,0,0,0,0.602878754119172,1.74306691720059,0.899756920638513,3.64871341923571,9.5428847372104,6.32501818449095,0.479249710983165,0,0,0.144781306667579,0.205476322550383,0.179060963239896,0,0,0,0,0.254094624222463,0,1.54657762555539,1.34013012267479,1.27587750330633,0,0,0.414415513436035,0.36807447515742,2.00068208423871,1.35632511849868,0.415941723061614,0.713715955188647,0.157702415033935,0,0,0,4.1389228517002,0,1.29058417979192,0.347534457872331,1.17480694477644,0.343143423810856,0.620304078368662,0.647142602455851,0.533637789017222,17.2782715724368,26.6296703216795,29.9366390396384,0.248107807818777,0,0,0,0.511707249066704,0,1.48418066444991,0.308419387605311,0.532685175939381,0.164254312027618,0,0.348631135379878,13.4153989046701,4.41114234667227,3.68323955743585,0.114814448164607,0.364182336013434,0.393373244878272,3.15839729035188,2.77255213575893,0.784349769176855,0,0.73886140225013,2.27466768141793,1.19065593693561,0,0,1.62567862526312,1.50506932156456,3.56826782263054,3.3243040357149,1.56712328305525,0,0,0.256450125116389,1.31205858279882,1.30151357865721,16.3835208519878,0,0,3.44559322797703,5.20048196829217,0,0.096670718292122,0,0.307007349452259,0,0.322260734604821,0.145016693914229,0.596586391912706,0.445160178233687,2.64455864577565,1.72971060628596,6.76347376221296,3.13589120652205,0.464845549297286,0.31481234683064,0,0.924100740528266,0.532306030317022,0.869932992075073,0.9266210955196,0.143124886741991,1.116475108079,0.316379424718726,0.190630193923825,0.767693373934002,0,0.3182032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| |||
|short_description=p2@RGL2 | |||
}} |
Revision as of 11:23, 22 January 2014
Short description: | p2@RGL2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_RGL2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000485077_5end |
EntrezGene: | RGL2 |
HGNC: | 9769 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 5.41e-16 | 253 |
endodermal cell | 1.57e-14 | 58 |
endo-epithelial cell | 9.90e-13 | 42 |
dendritic cell | 5.67e-08 | 10 |
epithelial cell of alimentary canal | 2.54e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
embryo | 1.24e-10 | 592 |
endoderm-derived structure | 2.16e-10 | 160 |
endoderm | 2.16e-10 | 160 |
presumptive endoderm | 2.16e-10 | 160 |
developing anatomical structure | 1.23e-08 | 581 |
extraembryonic membrane | 2.19e-08 | 14 |
membranous layer | 2.19e-08 | 14 |
embryonic structure | 7.01e-08 | 564 |
digestive system | 3.06e-07 | 145 |
digestive tract | 3.06e-07 | 145 |
primitive gut | 3.06e-07 | 145 |
germ layer | 3.62e-07 | 560 |
germ layer / neural crest | 3.62e-07 | 560 |
embryonic tissue | 3.62e-07 | 560 |
presumptive structure | 3.62e-07 | 560 |
germ layer / neural crest derived structure | 3.62e-07 | 560 |
epiblast (generic) | 3.62e-07 | 560 |
subdivision of digestive tract | 4.24e-07 | 118 |
chorion | 7.72e-07 | 7 |
orifice | 7.86e-07 | 36 |