FFCP PHASE1:Hg19::chr6:126240463..126240489,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=135112 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21081 | |||
|TSSclassifier=strong | |||
|UniProt=Q8NI08 | |||
|association_with_transcript=0bp_to_uc003qak.2_5end | |||
|coexpression_cluster_id=C1532 | |||
|description=CAGE_peak_6_at_NCOA7_5end | |||
|id=chr6:126240463..126240489,+ | |||
|ontology_enrichment_celltype=CL:0000860!7.37e-16!45;CL:0002057!2.65e-14!42;CL:0002009!4.88e-11!65;CL:0002194!3.35e-10!63;CL:0000576!3.35e-10!63;CL:0000040!3.35e-10!63;CL:0000559!3.35e-10!63;CL:0000763!1.08e-09!112;CL:0000049!1.08e-09!112;CL:0000557!4.31e-09!71;CL:0000839!2.12e-07!70;CL:0000766!2.66e-07!76 | |||
|ontology_enrichment_celltype_v019=CL:0000860;8.95e-14;33!CL:0002057;8.95e-14;33!CL:0000473;6.49e-10;39!CL:0000234;6.49e-10;39!CL:0000576;3.20e-09;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.00e-14,42;CL:0002057,2.00e-14,42;CL:0000473,2.72e-12,48;CL:0000234,2.72e-12,48;CL:0002009,4.94e-11,61;CL:0002194,6.15e-10,59;CL:0000576,6.15e-10,59;CL:0000040,6.15e-10,59;CL:0000559,6.15e-10,59;CL:0000763,8.03e-10,108;CL:0000049,8.03e-10,108;CL:0000557,1.06e-09,67;CL:0000839,7.38e-08,66;CL:0000766,2.23e-07,72 | |||
|ontology_enrichment_development_v019=CL:0002057;1.16e-10;42!UBERON:0008947;1.77e-10;29 | |||
|ontology_enrichment_disease=DOID:305!4.40e-11!106;DOID:162!1.25e-08!235;DOID:14566!4.68e-08!239 | |||
|ontology_enrichment_disease_v019=DOID:1749;5.44e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:305,3.39e-16,106;DOID:162,2.18e-13,235;DOID:14566,1.52e-12,239;DOID:0050687,5.16e-10,143;DOID:1749,5.55e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0002405!4.36e-09!115;UBERON:0004921!7.20e-09!129;UBERON:0004185!7.20e-09!129;UBERON:0001041!1.27e-08!98;UBERON:0002371!1.51e-08!80;UBERON:0001007!1.53e-08!155;UBERON:0001555!1.53e-08!155;UBERON:0007026!1.53e-08!155;UBERON:0004119!2.42e-08!169;UBERON:0000925!2.42e-08!169;UBERON:0006595!2.42e-08!169;UBERON:0000077!3.61e-08!130;UBERON:0000926!4.30e-08!448;UBERON:0004120!4.30e-08!448;UBERON:0006603!4.30e-08!448;UBERON:0001474!7.60e-08!86;UBERON:0002390!7.69e-08!102;UBERON:0003061!7.69e-08!102;UBERON:0002193!8.08e-08!112;UBERON:0001737!1.53e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.86e-10;9!UBERON:0001557;1.86e-10;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,1.88e-10,9;UBERON:0002371,4.92e-10,76;UBERON:0001474,7.93e-10,82;UBERON:0001041,5.38e-09,87;UBERON:0002405,1.02e-08,93;UBERON:0004921,4.35e-08,118;UBERON:0002390,6.20e-08,98;UBERON:0003061,6.20e-08,98;UBERON:0002193,6.21e-08,108;UBERON:0004765,6.59e-08,90;UBERON:0001557,2.22e-07,19;UBERON:0001007,2.61e-07,145;UBERON:0001555,2.61e-07,145;UBERON:0007026,2.61e-07,145;UBERON:0008947,3.37e-07,38;UBERON:0003258,3.37e-07,38;UBERON:0001004,4.86e-07,74 | |||
|phase1_expression=0,0,0,0,0.446961094427288,0,0,0,0,1.47440361900905,0,1.09220686065086,0.527533956456907,0.247532705920093,0,0,0,0.730310090387373,0,0,0,0,0,0,0,2.9801228241701,2.95562122019805,4.80135766013443,1.18009283054671,0.767658796194425,1.08371286321253,0,0,0,0,0,23.4880351467878,1.10799081706375,0.401088894940283,1.30206522429511,0,0,0,0.436194716338694,0,0.242584061187816,1.16214518452842,0.411167888021826,0.929119112685311,20.7138522471948,15.369642391746,28.6143498165188,19.3057581212506,7.74581620300591,8.12558919566051,0.188242339542605,0,0.898893937780338,40.0969899005882,19.2557416245656,31.9668562899521,21.7701858123233,14.5608470063791,16.6227652707751,18.5733912722294,2.26954089876456,9.34233373493363,16.5824119069451,15.1230046341858,24.9767171410884,39.350967671169,12.5214396235772,28.7980772571205,1.26753171787165,1.27562579979026,1.25795187305026,1.46027220490444,1.05123824989054,1.6072558669708,0.285012743741249,0.79566670879636,0.365328307529268,0,0,0,0,0,0,0,0,0,0,0,6.60856642895129,8.40762844472304,14.2227405778542,0.393419540227666,0.393010762749165,0.205601498999509,0,0,0,0,0,0,0.221533894583621,0,0,0,0,0.276350017785848,0,0,0,0,0,0,0,0,0.637130828648193,0,0,0.602300476311091,0,0,0.236777252044017,0,0.201606743224732,0,0.144824403882799,0,1.34140171940727,0.12786256184353,0.361439152384566,0,0,0,0,0.378139268656271,0.221729397462564,0.263504357079378,1.0478326039817,0.364295288292542,0,0,0.174129737299267,0,0,0.571994910780128,0.74291500265913,0,0,0,0,0.419499436209906,0.550236083880135,0,0,0.35576626268671,0,0,0,0,0.367663080345869,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,3.83986624358335,0.286836620748814,0,1.68203280042692,4.2699598291882,1.48000529050296,0.311211035399766,0.67355336034844,0.326923806226917,0.151357427644931,1.15235184896,0,0,0,0,0,0,0,0,0,0,0,0.741800787835671,0,0,0,0,0,0,0,0.45071417671979,0.907457465280168,0,0,0,0,0,0.515281080091258,0,0,0,0.252433774244115,0,0.161646056818812,0,0,0,0,0.818238361772504,0.286804595389004,0,0,0,0,0,0,1.56449532329816,0,0,0,0,14.7883500049805,13.9925292764824,13.978639733242,18.198505500845,20.6985471887786,13.5244252893325,11.460661193614,13.9317240238996,15.774633434802,0,1.40241773803446,0,0,1.26755034821831,4.91413608338813,1.18157981336281,0,1.10689594688802,0,0.109750285408626,0,0.100528972411631,0.462942225792648,0,0,0,0,1.76113041353732,0.866198686566443,1.38895653772983,1.14152491340759,0,0,0.246217006087397,0,0,0,0.335964256397719,0.567100388969546,0.806026704325635,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.517086863031111,0,0,0.531876233169741,0,0,0,0,0.142977993658148,0,0,0,0,0.791951872933429,0.301439377059586,1.74306691720059,0.599837947092342,2.43247561282381,0.502257091432126,0,3.59437283237374,1.14861935834114,0,0,0.410952645100767,0.179060963239896,0,0.197030760201927,0,0.256686072559497,0,0,0,0,0,0,0,0.414415513436035,0.36807447515742,0.500170521059677,0.271265023699736,5.61521326133179,3.39015078714607,4.41566762095017,1.87426263988341,0,0,0,0,0,0,0,0,0.82707210449155,0.862856803274467,0,0.303127571446259,0,0.30239029332968,0,0,0,0.128139149255701,0,0,0,0,0,0.0821271560138091,0.519254429183621,0.116210378459959,1.93375119346596,0,0,0.114814448164607,0.182091168006717,0.393373244878272,0,0.0770153371044148,0,0,0.949964660035881,0,0,0.431831832204279,3.08454505380579,0,0,0.254876273045038,0,0,0,0,0,0,0,0.9273691048295,0,0,0,0.650060246036521,0,0,0.308097234229289,0.307007349452259,0,0,0,0.0852266274161009,0.0890320356467374,2.14870389969272,0,3.06270509987002,0.4046311234222,0,0.94443704049192,0,0.616067160352178,0,0,1.48259375283136,9.58936741171341,0,0,0,0,0,0.318203247925937,2.35484592059769,0,0,0,0.202182481573316,0,0,0,2.68084838594413,0,0,0.141405431953713,0,1.10273068709225,0.66343897524122,0.438450885253763,0,0,0.202910376962704,0.6196469961995,0,0,0,0.35667105148125,0,1.26664581178598,0.658589785919804,0,0,0.192444225451024,0,0,0.847294206991012,0,0,0.443430153536676,0.229723400206959,0,0,0,0,0,0.648473311192717,0,0.79312517629427,0,0,3.92064345569651,0,0,0,0,0.399158742865633,8.80924702608887,1.05836791361941,5.843194924942,10.389495590198,0.228234679033192,2.0368386450493,2.50634477090067,1.69291777801603,0.481764225311099,0.605399121573143,0,6.18309620560377,1.53620382154229,2.01308497103174,2.16903884225481,2.54004524022652,0,0,11.6295941744673,0.99921590399346,9.86909035614947,2.61996756571508,0.439524537815682,0,0,0,0,0.890894042497916,0,0,0,0.111308705022906,15.1619564288619,0,1.59398390600856,2.48655523978033,0,0.102268682502155,0.738508832766417,0.311039587661807,1.07842021376792,6.44476228832193,0.511572370226872,0.690503839458535,2.3948309234694,0,0,0.0927680981618513,1.99613798001194,2.08342208868187,1.57427999993152,2.17499872630438,1.4793148277115,6.10208760702639,4.25497827182285,0,0,0.347249989866585,0,0,0,0.221158519862449,0,0.658156191461918,1.0893846351899,7.52888219104458,0.615602068030377,3.53220373125704,0,0.269272933229316,0.760531603454056,1.27600463892768,0.09159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| |||
|short_description=p6@NCOA7 | |||
}} |
Revision as of 13:45, 22 January 2014
Short description: | p6@NCOA7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_NCOA7_5end |
Coexpression cluster: | C1532_CD14_serous_clear_pharyngeal_epidermoid_large_glassy |
Association with transcript: | 0bp_to_uc003qak.2_5end |
EntrezGene: | NCOA7 |
HGNC: | 21081 |
UniProt: | Q8NI08 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.00e-14 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.00e-14 | 42 |
defensive cell | 2.72e-12 | 48 |
phagocyte | 2.72e-12 | 48 |
macrophage dendritic cell progenitor | 4.94e-11 | 61 |
monopoietic cell | 6.15e-10 | 59 |
monocyte | 6.15e-10 | 59 |
monoblast | 6.15e-10 | 59 |
promonocyte | 6.15e-10 | 59 |
myeloid cell | 8.03e-10 | 108 |
common myeloid progenitor | 8.03e-10 | 108 |
granulocyte monocyte progenitor cell | 1.06e-09 | 67 |
myeloid lineage restricted progenitor cell | 7.38e-08 | 66 |
myeloid leukocyte | 2.23e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
larynx | 1.88e-10 | 9 |
bone marrow | 4.92e-10 | 76 |
bone element | 7.93e-10 | 82 |
foregut | 5.38e-09 | 87 |
immune system | 1.02e-08 | 93 |
subdivision of digestive tract | 4.35e-08 | 118 |
hematopoietic system | 6.20e-08 | 98 |
blood island | 6.20e-08 | 98 |
hemolymphoid system | 6.21e-08 | 108 |
skeletal element | 6.59e-08 | 90 |
upper respiratory tract | 2.22e-07 | 19 |
digestive system | 2.61e-07 | 145 |
digestive tract | 2.61e-07 | 145 |
primitive gut | 2.61e-07 | 145 |
respiratory primordium | 3.37e-07 | 38 |
endoderm of foregut | 3.37e-07 | 38 |
respiratory system | 4.86e-07 | 74 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 3.39e-16 | 106 |
cancer | 2.18e-13 | 235 |
disease of cellular proliferation | 1.52e-12 | 239 |
cell type cancer | 5.16e-10 | 143 |
squamous cell carcinoma | 5.55e-07 | 14 |