FFCP PHASE1:Hg19::chr7:105441012..105441027,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C52 | |||
|description=CAGE_peak_at_chr7:105441012..105441027,- | |||
|id=chr7:105441012..105441027,- | |||
|ontology_enrichment_celltype=CL:0000864!1.16e-15!1;CL:0000091!1.16e-15!1;CL:0000084!2.38e-14!25;CL:0000827!2.38e-14!25;CL:0000838!6.17e-13!52;CL:0000542!1.10e-12!53;CL:0000051!1.10e-12!53;CL:0000624!1.73e-10!6;CL:0000815!1.29e-08!2;CL:0000792!1.29e-08!2;CL:0002677!1.29e-08!2;CL:0002087!7.04e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0000815;4.52e-50;2!CL:0000792;4.52e-50;2!CL:0002677;4.52e-50;2!CL:0000898;5.96e-34;3!CL:0000624;9.07e-18;6!CL:0000084;4.64e-17;25!CL:0000791;7.60e-07;18!CL:0000789;7.60e-07;18!CL:0002419;7.60e-07;18!CL:0000542;7.90e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000815,4.52e-50,2;CL:0000792,4.52e-50,2;CL:0002677,4.52e-50,2;CL:0000898,5.96e-34,3;CL:0000624,9.07e-18,6;CL:0000084,4.64e-17,25;CL:0000827,4.64e-17,25;CL:0000838,6.99e-09,52;CL:0000542,9.74e-09,53;CL:0000051,9.74e-09,53;CL:0000791,7.60e-07,18;CL:0000789,7.60e-07,18;CL:0002420,7.60e-07,18;CL:0002419,7.60e-07,18;CL:0000790,7.60e-07,18 | |||
|ontology_enrichment_development_v019=CL:0000790;7.60e-07;18!CL:0000051;7.90e-07;53 | |||
|ontology_enrichment_disease=DOID:3571!1.16e-15!1;DOID:630!1.34e-15!1;DOID:0050177!1.34e-15!1;DOID:0050427!1.34e-15!1;DOID:0060060!2.06e-15!1;DOID:0060061!2.06e-15!1;DOID:8691!2.06e-15!1;DOID:3350!1.73e-08!2 | |||
|ontology_enrichment_disease_v019=DOID:0060058;2.73e-11;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,2.73e-11,10 | |||
|ontology_enrichment_uberon=UBERON:0002134!8.63e-16!1;UBERON:0005208!8.63e-16!1;UBERON:0005946!8.63e-16!1;UBERON:0005965!8.63e-16!1;UBERON:0002078!8.63e-16!1;UBERON:0002081!1.50e-08!2;UBERON:0002133!1.50e-08!2 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0,0,0,0,0,0,1.47302953737419,0.664601683750863,0.270803863765016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.2617627290199,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.208843899010911,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.788662062837943,0,0,0.717873024576814,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124149428591716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320568492303233 | |||
|short_description=p@chr7:105441012..105441027,- | |||
}} | |||
Revision as of 18:37, 22 January 2014
| Short description: | p@chr7:105441012..105441027, - |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | No |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_at_chr7:105441012..105441027, - |
| Coexpression cluster: | C52_adult_NK_chronic_cord_testis_embryonic_myeloma |
| Association with transcript: | NA |
| EntrezGene: | NA |
| HGNC: | NA |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| regulatory T cell | 4.52e-50 | 2 |
| CD4-positive, CD25-positive, alpha-beta regulatory T cell | 4.52e-50 | 2 |
| naive regulatory T cell | 4.52e-50 | 2 |
| naive T cell | 5.96e-34 | 3 |
| CD4-positive, alpha-beta T cell | 9.07e-18 | 6 |
| T cell | 4.64e-17 | 25 |
| pro-T cell | 4.64e-17 | 25 |
| lymphoid lineage restricted progenitor cell | 6.99e-09 | 52 |
| lymphocyte | 9.74e-09 | 53 |
| common lymphoid progenitor | 9.74e-09 | 53 |
| mature alpha-beta T cell | 7.60e-07 | 18 |
| alpha-beta T cell | 7.60e-07 | 18 |
| immature T cell | 7.60e-07 | 18 |
| mature T cell | 7.60e-07 | 18 |
| immature alpha-beta T cell | 7.60e-07 | 18 |
| Ontology term | p-value | n |
|---|---|---|
| lymphoma | 2.73e-11 | 10 |
