FFCP PHASE1:Hg19::chr8:74888516..74888527,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54968 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26050 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=62bp_to_ENST00000517614_5end | |||
|coexpression_cluster_id=C3497 | |||
|description=CAGE_peak_3_at_TMEM70_5end | |||
|id=chr8:74888516..74888527,+ | |||
|ontology_enrichment_celltype=CL:0000557!9.97e-34!71;CL:0002009!3.24e-33!65;CL:0000766!1.54e-32!76;CL:0000839!4.23e-32!70;CL:0002194!6.08e-32!63;CL:0000576!6.08e-32!63;CL:0000040!6.08e-32!63;CL:0000559!6.08e-32!63;CL:0002057!9.25e-31!42;CL:0000860!5.69e-28!45;CL:0000763!5.10e-25!112;CL:0000049!5.10e-25!112;CL:0000738!4.42e-21!140;CL:0002031!1.85e-19!124;CL:0000037!3.31e-19!172;CL:0000566!3.31e-19!172;CL:0002087!7.27e-19!119;CL:0000988!8.63e-18!182;CL:0002032!2.81e-17!165;CL:0000837!2.81e-17!165 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.57e-76;33!CL:0002057;4.57e-76;33!CL:0000473;9.21e-59;39!CL:0000234;9.21e-59;39!CL:0000576;4.91e-51;48!CL:0000766;5.41e-33;69!CL:0000763;7.07e-17;100!CL:0002087;5.71e-12;104!CL:0002393;1.24e-10;6!CL:0002397;1.24e-10;6!CL:0000738;1.24e-09;136!CL:0000767;1.95e-08;3!CL:0000784;5.31e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.64e-85,42;CL:0002057,1.64e-85,42;CL:0000473,1.20e-81,48;CL:0000234,1.20e-81,48;CL:0002009,5.81e-74,61;CL:0002194,3.49e-73,59;CL:0000576,3.49e-73,59;CL:0000040,3.49e-73,59;CL:0000559,3.49e-73,59;CL:0000766,2.70e-70,72;CL:0000557,2.03e-69,67;CL:0000839,3.10e-64,66;CL:0000763,2.50e-53,108;CL:0000049,2.50e-53,108;CL:0000738,5.16e-38,136;CL:0000037,8.41e-34,168;CL:0002087,1.20e-33,115;CL:0002031,8.55e-32,120;CL:0000988,2.31e-31,177;CL:0002032,2.67e-31,161;CL:0000837,2.67e-31,161;CL:0000134,4.86e-10,354;CL:0002320,1.39e-09,361;CL:0000767,1.38e-08,3;CL:0000219,1.47e-08,386;CL:0000784,3.84e-08,3;CL:0002393,5.17e-07,9;CL:0002397,5.17e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;4.16e-62;42!CL:0000049;3.92e-17;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!3.29e-28!80;UBERON:0001474!1.23e-25!86;UBERON:0002390!1.08e-24!102;UBERON:0003061!1.08e-24!102;UBERON:0002193!3.93e-22!112;UBERON:0002405!4.28e-20!115;UBERON:0004765!6.98e-20!101;UBERON:0001434!6.98e-20!101;UBERON:0007023!1.20e-10!115;UBERON:0002204!3.42e-09!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,8.43e-60,76;UBERON:0001474,1.50e-54,82;UBERON:0004765,1.24e-48,90;UBERON:0002405,1.13e-46,93;UBERON:0002390,7.46e-46,98;UBERON:0003061,7.46e-46,98;UBERON:0001434,1.48e-42,100;UBERON:0002193,1.83e-40,108;UBERON:0002204,1.16e-24,167;UBERON:0003081,6.38e-18,203;UBERON:0000926,3.37e-11,315;UBERON:0004120,3.37e-11,315;UBERON:0006603,3.37e-11,315;UBERON:0002384,9.28e-11,371 | |||
|phase1_expression=0.54503513781167,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0.662794751455832,0,0,0.730310090387373,0,0.123121058076788,0,0,0,0,0,0,0,0.0787107813136792,1.96682138424452,3.45446458287491,7.58599004248772,0,0,0,0,0,0.293600439334847,9.41792194504192,1.60435557976113,4.12320654360118,0.671746422719773,1.94336199611388,1.03030227053675,4.50734540216651,4.1566353805769,6.30718559088322,4.18372266430232,6.57868620834921,10.2203102395384,5.46615545412086,9.73410684810582,12.2970759542064,12.7555901872549,14.2006630388442,16.251178391321,3.38836211176688,3.82068610080984,8.31476892446813,4.89734227793444,5.45579346029359,12.1474053901818,5.60747210317417,5.58498241340569,8.09827026012119,3.77272010217159,4.53908179752912,1.86846674698672,9.2962006144995,11.9941071236646,13.6828972164223,1.21079900526674,9.20694089968912,5.69632297393592,0.633765858935825,1.70083439972035,3.77385561915077,3.81917345898083,3.30389164251314,4.018139667427,0.570025487482497,0,0.91332076882317,0,0,0,0.853460445133014,0.400395987036012,0,0,0.954053754535364,0,0,0,1.32171328579026,1.68152568894461,0,0,0.786021525498329,0.205601498999509,0,0,0,0,0.111410456885174,0,0.221533894583621,0.270803863765016,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0.318565414324097,0,0,0,0,0,0.236777252044017,0.821127996921047,0.604820229674197,0.534880391567015,0.144824403882799,0,0,0,0.361439152384566,0,0,0,0,0,0.221729397462564,0.087834785693126,2.03017567021455,0,0,0.97364218096405,0.870648686496336,0.26591592103773,4.05434061319081,1.71598473234038,1.85728750664782,0,0,0.347140501607594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0.25326102332916,0,0,0,0,0,0,0.311211035399766,0.404132016209064,0.163461903113459,0,0,0.70296429550139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0.18611685633159,0.168776332241266,0,0,0,0,0,0.201504196455281,0,0.193260853163297,0,0,0,0,0,0,0.252320850875628,0,0,0,0,1.85747171212792,0,0.354920400119532,0.168584690078102,0,0.110293972732394,0,0,0.134831308160164,0.196221465125346,0.38474715694639,0,0,0,0,1.26755034821831,0,0.590789906681404,0,0.368965315629341,0,0,0,0,0,0.651616610620649,0,0,0,0.117408694235822,0.144366447761074,0,0.190254152234598,0,0,0.984868024349589,0.468008530278475,0.743155811443641,0,0,0,0.0895585227028483,0,0.383382679165211,0.492663237895943,0.264145302039678,0.207328115540772,0,0.25248486685276,0.571481048629521,0,0,0,0.308482478109971,0.300343057843917,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0.285955987316295,0,0,0,0,0,0,0.871533458600294,0.099972991182057,0,3.01354254859276,2.10833939483032,0,0,0,0.144781306667579,0,0.179060963239896,0,0.985153801009636,0.862510299438069,0.128343036279748,0.508189248444927,0,0,0,0,0.749007023947182,0,1.24324654030811,0,0,0,0.207970861530807,0,0.157702415033935,0,0,0,0,0,0,0,0.391602314925481,0.343143423810856,0.413536052245775,0.431428401637234,1.81436848265855,0,0,0,0.496215615637554,0,0.280660094433074,0.256278298511402,0,0,1.48418066444991,0,0.532685175939381,0,0,0.232420756919918,0.120859449591622,0,0,0.114814448164607,0,0.131124414959424,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0.219259876645935,0.261435451024901,0,0,0.325378394664303,0.618246069886334,0,0,0,0,0,0,0,0.15350367472613,0,0,0,0.0852266274161009,0,0.165284915360978,0,0,0,0,0.31481234683064,0,0.308033580176089,0,0,0.18532421910392,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0.655894752046633,0,0.30982349809975,0,0.143411352204052,0,0,0,0.422215270595328,0,0,0.349934720244983,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0.238231775457789,0.822724546172388,0.648473311192717,0,0,0.213648142254946,0,0,0.185803175125719,0.144269212976445,0.0711418433484141,0,0.199579371432817,0,0,1.62310970137278,0,0.228234679033192,0,0,0.169291777801603,0.1605880751037,0,0,0,0.307240764308458,0.223676107892416,0.166849141711909,0,0.278406173895242,1.23087398947712,0.270455678475983,0,0,0,1.02555725490326,0,0.222886768554957,0,0,0,0,0,0.140669416410513,0.222617410045812,0,0,0,0.276283915531148,0,0.20453736500431,0,0,0,0,0,0.493217028184668,0,0,0,0.463840490809256,0,0,0,0.724999575434793,0,0.508507300585533,0,0,0.874813840149763,0,0.885741385813839,0.361789315876224,0,0.110579259931225,0.295547618953547,0.438770794307945,0.21787692703798,0.139423744278603,0.0769502585037971,0.341826167541004,0,0,0,0,0.641183153813036,0.533034776018635,0,0.31396051279005,0,0,0,0,1.13852239634511,0.158936578980379,0,0,0,0,2.98578579323551,0.530745387020035,1.22206028986725,0,0.494255755786011,0,0.067401132980677,2.40773294189637,0.468528891450678,0,0,0,0,0,0,4.67580689250811,0.150323419414493,0.103688191397247,0.664653872707185,0,0,0,0,0.693373365065693,0.173559738335131,0.293977192243133,0.0870592065804026,0.34945333648406,0.687944129886466,0,0.0730893170861856,0,0.193978032976839,0.0882561266915003,0,0,0.19871461170299,0.379864775735272,0,0,0.213452994739353,0.19980960958213,0,0.114536596165916,0,0,0.124252535565433,0.471388069233591,0,0.104602846312333,0.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| |||
|short_description=p3@TMEM70 | |||
}} |
Revision as of 22:33, 22 January 2014
Short description: | p3@TMEM70 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TMEM70_5end |
Coexpression cluster: | C3497_skeletal_CD14_Dendritic_Monocytederived_Basophils_Macrophage_immature |
Association with transcript: | 62bp_to_ENST00000517614_5end |
EntrezGene: | TMEM70 |
HGNC: | 26050 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.64e-85 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.64e-85 | 42 |
defensive cell | 1.20e-81 | 48 |
phagocyte | 1.20e-81 | 48 |
macrophage dendritic cell progenitor | 5.81e-74 | 61 |
monopoietic cell | 3.49e-73 | 59 |
monocyte | 3.49e-73 | 59 |
monoblast | 3.49e-73 | 59 |
promonocyte | 3.49e-73 | 59 |
myeloid leukocyte | 2.70e-70 | 72 |
granulocyte monocyte progenitor cell | 2.03e-69 | 67 |
myeloid lineage restricted progenitor cell | 3.10e-64 | 66 |
myeloid cell | 2.50e-53 | 108 |
common myeloid progenitor | 2.50e-53 | 108 |
leukocyte | 5.16e-38 | 136 |
hematopoietic stem cell | 8.41e-34 | 168 |
nongranular leukocyte | 1.20e-33 | 115 |
hematopoietic lineage restricted progenitor cell | 8.55e-32 | 120 |
hematopoietic cell | 2.31e-31 | 177 |
hematopoietic oligopotent progenitor cell | 2.67e-31 | 161 |
hematopoietic multipotent progenitor cell | 2.67e-31 | 161 |
mesenchymal cell | 4.86e-10 | 354 |
connective tissue cell | 1.39e-09 | 361 |
basophil | 1.38e-08 | 3 |
motile cell | 1.47e-08 | 386 |
plasmacytoid dendritic cell | 3.84e-08 | 3 |
intermediate monocyte | 5.17e-07 | 9 |
CD14-positive, CD16-positive monocyte | 5.17e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 8.43e-60 | 76 |
bone element | 1.50e-54 | 82 |
skeletal element | 1.24e-48 | 90 |
immune system | 1.13e-46 | 93 |
hematopoietic system | 7.46e-46 | 98 |
blood island | 7.46e-46 | 98 |
skeletal system | 1.48e-42 | 100 |
hemolymphoid system | 1.83e-40 | 108 |
musculoskeletal system | 1.16e-24 | 167 |
lateral plate mesoderm | 6.38e-18 | 203 |
mesoderm | 3.37e-11 | 315 |
mesoderm-derived structure | 3.37e-11 | 315 |
presumptive mesoderm | 3.37e-11 | 315 |
connective tissue | 9.28e-11 | 371 |