FFCP PHASE1:Hg19::chr8:86121478..86121494,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr8:86121478..86121494,+ | |||
|id=chr8:86121478..86121494,+ | |||
|ontology_enrichment_celltype=CL:0002322!2.31e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000540;3.96e-12;6!CL:0000404;3.96e-12;6!CL:0000047;1.38e-09;2!CL:0002231;8.38e-07;3!CL:0000307;8.38e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,2.41e-19,8;CL:0000540,3.08e-12,6;CL:0000031,3.08e-12,6;CL:0000404,3.08e-12,6;CL:0002231,8.15e-07,3;CL:0000068,9.64e-07,3;CL:0000069,9.64e-07,3;CL:0000307,9.64e-07,3;CL:0000377,9.64e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0000358;3.16e-18;1!UBERON:0005425;8.01e-18;1!CL:0000031;3.96e-12;6!UBERON:0009117;1.52e-07;10!UBERON:0005564;1.52e-07;10!CL:0000377;8.38e-07;3!UBERON:0003056;8.38e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1909;8.37e-34;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,1.93e-33,2 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;8.01e-18;1!UBERON:0001785;8.01e-18;1!UBERON:0002464;8.01e-18;1!UBERON:0004904;8.01e-18;1!UBERON:0001021;8.01e-18;1!UBERON:0003714;1.38e-09;2!UBERON:0005162;1.38e-09;2!UBERON:0000122;1.38e-09;2!UBERON:0000473;3.27e-09;8!UBERON:0003101;2.34e-07;22!UBERON:0000079;2.34e-07;22!UBERON:0003135;6.16e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,6.23e-18,1;UBERON:0001785,6.23e-18,1;UBERON:0002464,6.23e-18,1;UBERON:0004904,6.23e-18,1;UBERON:0001021,6.23e-18,1;UBERON:0003902,6.23e-18,1;UBERON:0005425,6.23e-18,1;UBERON:0003714,1.22e-09,2;UBERON:0005162,1.22e-09,2;UBERON:0000122,1.22e-09,2;UBERON:0000473,3.01e-09,8;UBERON:0003101,2.21e-07,22;UBERON:0000079,2.21e-07,22;UBERON:0003135,5.81e-07,11 | |||
|phase1_expression=0,0,0,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0.284338464974843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16072558669708,0,0,0,0,0,0.889509253863555,0.426730222566507,0.400395987036012,0,0,0,0,0,0.382273228125229,0,0,0.263384084775077,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0.735326160691737,0,0,0,0,0,0,0,0,0,0,0,0.25326102332916,0,0.286836620748814,0,0,0,0.24666754841716,0,0.269421344139376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920498986422993,0.161646056818812,0,0,0,0,0,0,0.243947412259191,0.265059536642971,0.464775771478074,0.10366105501537,0.756962552626885,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0.237270619111097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.858486162094873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,1.01637849688985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.519254429183621,0.116210378459959,1.32945394550784,0,0.276242966807689,0.229628896329213,0,0.262248829918848,0,0.0770153371044148,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0.103041011647722,0,0,0,0,0,0.386682873168488,0.154048617114644,0,0,0,0,0.170453254832202,0,0.495854746082934,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08890984861323,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0.79312517629427,0.213648142254946,0,0,0,0,0.142283686696828,0,0.199579371432817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0.251932747854276,0,0,0,0,0,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0,0,0,0.254253650292766,0,0,0.291604613383254,0,0,0,0,0,0,0,0,0,0.461701551022782,0,0,0.538545866458633,0.108647371922008,0,0.0915975934018623,0,0,0,0,0,0,0,0,0.158936578980379,0.421996129056054,0,0,0,0,0.0884575645033392,0.611030144933625,0,0.123563938946503,0,0,0,0,0.182454789215666,0.19566461893209,0,0,0,0,0,1.50323419414493,0.518440956986236,0,0.330991955875499,0,0,0,0,0.867798691675654,0,0.0870592065804026,0.34945333648406,0,0,0.0730893170861856,0,0.0969890164884194,0.264768380074501,0,0,0,0,0,0,0,0,0,0,0.171594997861965,0.14405479798815,0,0,0,0,0.101998217636322,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0824158583811665,0.0674035438541849,0.688992370603241,0.338693328263138,0,0,0.643012593860077,1.92555211236127,3.73896304226267,0,0,0,0,0.157611414598396,0.0524545881349981,0.105600336519406,0.179287339332845,0,0,0,0,0,0,0.326587360109409,0,0,0,0,0.293104467356165,0,0,0,0,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0.573409195690071,0,0,0.691743174681154,0,1.06154382279153,1.14186133417987,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0.260994291965212,0,0,0.244736704506468,0,0,0.219284049578707,0,0,0.168942440653073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107824811396682,0.314531883711793,0.109209638192014,0,0,0.123935764259002,0,0,0.0788617450012534,0,0.352675943690684,0,0,0,0,0,0.252071696221718,0,0,1.42769420259154,0.294443155503077,0,0,0,0,0,0.198916222116275,0.225630985047772,0,0.781514011233092,0,0,0.147856086217045,0,0,0,0,0,0,0,0.879356221798103,0,0,0,0.606965604236632,0,0.0887023701626388,0.115233987555779,0,0,0,0,0.222462803784138,0.078493092850514,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0.170426809518315,0.423387050190929,0,0,0,0.111855431797792,0.098150233615243,0.121917924982269,0,0,0,0,0,0,0,0,0.109940516745429,0,0.0771741581079447,0,0,0,0,0,0.297046400327086,0,0,0.281951753939561,0,0.0999411559249289,0.178553938605658,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109265571963696,0.633492505057185,1.22386595690378,0,0.918948995348449,0,1.43979526614655,0,0,0,0,0,0.258355639344024,0.0620747142958579,0.112131862580613,0.25458863311266,0,0.217716747896961,0,0.0673520530145875,0.0717222053926763,0,0.0814032686109745,0.426909383510862,0,0.359300808426348,2.34640942403454,0,0,0,0,0 | |||
|short_description=p@chr8:86121478..86121494,+ | |||
}} |
Revision as of 22:45, 22 January 2014
Short description: | p@chr8:86121478..86121494, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr8:86121478..86121494, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 2.41e-19 | 8 |
neuron | 3.08e-12 | 6 |
neuroblast | 3.08e-12 | 6 |
electrically signaling cell | 3.08e-12 | 6 |
epithelial cell of prostate | 8.15e-07 | 3 |
duct epithelial cell | 9.64e-07 | 3 |
branched duct epithelial cell | 9.64e-07 | 3 |
tracheal epithelial cell | 9.64e-07 | 3 |
tracheoblast | 9.64e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 6.23e-18 | 1 |
cranial nerve | 6.23e-18 | 1 |
nerve trunk | 6.23e-18 | 1 |
nerve connecting eye with brain | 6.23e-18 | 1 |
nerve | 6.23e-18 | 1 |
retinal neural layer | 6.23e-18 | 1 |
presumptive neural retina | 6.23e-18 | 1 |
neural tissue | 1.22e-09 | 2 |
multi cell component structure | 1.22e-09 | 2 |
neuron projection bundle | 1.22e-09 | 2 |
testis | 3.01e-09 | 8 |
male organism | 2.21e-07 | 22 |
male reproductive system | 2.21e-07 | 22 |
male reproductive organ | 5.81e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
melanoma | 1.93e-33 | 2 |