FFCP PHASE1:Hg19::chr8:145086769..145086785,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=375686 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30510 | |||
|TSSclassifier=not | |||
|UniProt=Q76KD6 | |||
|association_with_transcript=162bp_to_BC053547_5end | |||
|coexpression_cluster_id=C681 | |||
|description=CAGE_peak_5_at_SPATC1_5end | |||
|id=chr8:145086769..145086785,+ | |||
|ontology_enrichment_celltype=CL:0000766!1.24e-47!76;CL:0002057!2.59e-45!42;CL:0000763!3.53e-45!112;CL:0000049!3.53e-45!112;CL:0000557!1.93e-43!71;CL:0000860!9.75e-42!45;CL:0000839!8.53e-39!70;CL:0002009!1.69e-37!65;CL:0002194!2.76e-36!63;CL:0000576!2.76e-36!63;CL:0000040!2.76e-36!63;CL:0000559!2.76e-36!63;CL:0000738!2.66e-35!140;CL:0000988!9.50e-33!182;CL:0000037!2.95e-32!172;CL:0000566!2.95e-32!172;CL:0002032!1.62e-29!165;CL:0000837!1.62e-29!165;CL:0002031!6.15e-22!124;CL:0002087!2.75e-20!119;CL:0000451!7.58e-16!10;CL:0000990!4.51e-15!8;CL:0000453!4.51e-10!5;CL:0000081!1.12e-08!11;CL:0000134!1.17e-08!358;CL:0000094!1.22e-08!8;CL:0002320!2.95e-08!365;CL:0000840!1.31e-07!5;CL:0001029!1.31e-07!5;CL:0000080!2.75e-07!6;CL:0000219!7.46e-07!390 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.08e-26;33!CL:0002057;1.08e-26;33!CL:0000453;1.90e-23;5!CL:0000451;1.49e-18;10!CL:0000473;3.10e-17;39!CL:0000234;3.10e-17;39!CL:0002032;1.51e-13;1!CL:0000557;1.51e-13;1!CL:0000990;2.57e-13;8!CL:0000576;4.24e-13;48!CL:0000766;2.12e-09;69!CL:0000763;5.94e-08;100!CL:0000738;6.27e-08;136!CL:0000771;1.20e-07;2!CL:0002087;3.56e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.06e-28,42;CL:0002057,3.06e-28,42;CL:0000473,1.41e-24,48;CL:0000234,1.41e-24,48;CL:0000763,5.76e-24,108;CL:0000049,5.76e-24,108;CL:0000453,1.76e-23,5;CL:0000557,1.26e-20,67;CL:0002194,1.93e-19,59;CL:0000576,1.93e-19,59;CL:0000040,1.93e-19,59;CL:0000559,1.93e-19,59;CL:0000766,3.20e-19,72;CL:0002009,8.89e-19,61;CL:0000738,9.57e-19,136;CL:0000451,1.33e-18,10;CL:0000839,2.72e-17,66;CL:0000037,4.19e-17,168;CL:0000988,3.76e-16,177;CL:0002032,1.43e-15,161;CL:0000837,1.43e-15,161;CL:0000990,2.47e-13,8;CL:0002087,1.77e-09,115;CL:0002031,4.90e-09,120;CL:0000771,1.05e-07,2;CL:0000134,3.77e-07,354;CL:0002320,5.67e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;8.87e-19;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.49e-40!102;UBERON:0003061!1.49e-40!102;UBERON:0002193!9.26e-38!112;UBERON:0002371!1.96e-37!80;UBERON:0001474!3.99e-34!86;UBERON:0002405!3.37e-29!115;UBERON:0004765!1.43e-27!101;UBERON:0001434!1.43e-27!101;UBERON:0003081!5.60e-14!216;UBERON:0002204!1.01e-13!167;UBERON:0002384!1.04e-07!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.59e-18,76;UBERON:0001474,1.16e-16,82;UBERON:0004765,4.41e-15,90;UBERON:0002405,1.47e-14,93;UBERON:0002390,9.37e-14,98;UBERON:0003061,9.37e-14,98;UBERON:0001434,1.87e-13,100;UBERON:0002193,2.29e-12,108;UBERON:0002204,1.59e-07,167;UBERON:0002384,9.92e-07,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383829398097213,0.154816123316076,0,0,0,0,0,0,0,1.40381113229099,0.651032612147555,0,0,0,0.290796477559129,0,0,0.697287110717054,0.411167888021826,0.929119112685311,0.575384784644301,0.512321413058201,1.18241114944293,0.344745680736619,0,0,1.31769637679823,0.545812300115692,0.224723484445085,2.75475503133812,0.641858054152187,3.19668562899521,0,0.398927315243264,0,1.7412554317715,3.40431134814684,6.22822248995575,0.251248665256743,0.521482918420201,0,0.605399502633369,2.94622108790052,2.53169909952708,0,0,0,0.112328631146495,0.150176892841506,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0.522389211897802,0.26591592103773,0.476981248610684,0,1.48583000531826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.9534125230819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.297262324577456,0,0,0,0,0,0,0.985326475791887,0.088048434013226,0,0.288239906833923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0.749007023947182,0,0.828831026872071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324621940274555,0,0,0,0,0,0,0,0.425846237690326,0,0,0,0,0.19538809540204,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.593042257361244,0,0.313265848516366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27746588066972,0,0.525774708558629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.899895566206002,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.70234586794838,3.72021552877417,5.07052722193117,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0.218559560503957,0,0,0,0,0,0,0,0.0939839179798536,0.386747327841463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0,0.426467963801962,0,0,0.124149428591716,0,0,0,0,0,0.134704106029175,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p5@SPATC1 | |||
}} |
Revision as of 00:24, 23 January 2014
Short description: | p5@SPATC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_SPATC1_5end |
Coexpression cluster: | C681_immature_CD14_migratory_CD34_Eosinophils_Basophils_Dendritic |
Association with transcript: | 162bp_to_BC053547_5end |
EntrezGene: | SPATC1 |
HGNC: | 30510 |
UniProt: | Q76KD6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.06e-28 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.06e-28 | 42 |
defensive cell | 1.41e-24 | 48 |
phagocyte | 1.41e-24 | 48 |
myeloid cell | 5.76e-24 | 108 |
common myeloid progenitor | 5.76e-24 | 108 |
Langerhans cell | 1.76e-23 | 5 |
granulocyte monocyte progenitor cell | 1.26e-20 | 67 |
monopoietic cell | 1.93e-19 | 59 |
monocyte | 1.93e-19 | 59 |
monoblast | 1.93e-19 | 59 |
promonocyte | 1.93e-19 | 59 |
myeloid leukocyte | 3.20e-19 | 72 |
macrophage dendritic cell progenitor | 8.89e-19 | 61 |
leukocyte | 9.57e-19 | 136 |
dendritic cell | 1.33e-18 | 10 |
myeloid lineage restricted progenitor cell | 2.72e-17 | 66 |
hematopoietic stem cell | 4.19e-17 | 168 |
hematopoietic cell | 3.76e-16 | 177 |
hematopoietic oligopotent progenitor cell | 1.43e-15 | 161 |
hematopoietic multipotent progenitor cell | 1.43e-15 | 161 |
conventional dendritic cell | 2.47e-13 | 8 |
nongranular leukocyte | 1.77e-09 | 115 |
hematopoietic lineage restricted progenitor cell | 4.90e-09 | 120 |
eosinophil | 1.05e-07 | 2 |
mesenchymal cell | 3.77e-07 | 354 |
connective tissue cell | 5.67e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.59e-18 | 76 |
bone element | 1.16e-16 | 82 |
skeletal element | 4.41e-15 | 90 |
immune system | 1.47e-14 | 93 |
hematopoietic system | 9.37e-14 | 98 |
blood island | 9.37e-14 | 98 |
skeletal system | 1.87e-13 | 100 |
hemolymphoid system | 2.29e-12 | 108 |
musculoskeletal system | 1.59e-07 | 167 |
connective tissue | 9.92e-07 | 371 |