FFCP PHASE1:Hg19::chrX:2715113..2715130,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C415 | |||
|description=CAGE_peak_at_chrX:2715113..2715130,+ | |||
|id=chrX:2715113..2715130,+ | |||
|ontology_enrichment_celltype=CL:0002274!6.64e-18!5;CL:0000457!6.64e-18!5;CL:0002191!6.64e-18!5;CL:0000097!6.64e-18!5;CL:0000831!6.64e-18!5;CL:0002028!6.64e-18!5;CL:0002568!1.46e-10!1;CL:0000163!3.36e-10!9 | |||
|ontology_enrichment_celltype_v019=CL:0002535;1.17e-17;2!CL:0000333;5.73e-08;5!CL:0000097;7.25e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002535,1.07e-17,2;CL:0000097,7.49e-08,5;CL:0002028,7.49e-08,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3193;6.48e-18;2!DOID:962;6.48e-18;2!DOID:171;2.49e-14;10!DOID:1192;2.07e-12;3!DOID:4362;7.25e-08;5!DOID:3095;4.79e-07;22!DOID:2994;4.79e-07;22!DOID:169;7.58e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:3193,6.48e-18,2;DOID:962,6.48e-18,2;DOID:171,2.49e-14,10;DOID:1192,2.07e-12,3;DOID:4362,7.01e-08,5;DOID:3095,4.79e-07,22;DOID:2994,4.79e-07,22;DOID:169,7.58e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0002771!4.62e-28!3;UBERON:0000200!5.47e-25!6;UBERON:0003296!1.26e-22!4;UBERON:0010133!1.26e-22!4;UBERON:0001905!1.14e-20!2;UBERON:0002757!1.14e-20!2;UBERON:0010134!1.14e-20!2;UBERON:0002784!1.14e-20!2;UBERON:0005408!1.14e-20!2;UBERON:0001899!1.14e-20!2;UBERON:0001871!1.01e-18!7;UBERON:0002780!5.17e-17!41;UBERON:0001890!5.17e-17!41;UBERON:0006240!5.17e-17!41;UBERON:0003080!1.37e-16!42;UBERON:0001950!1.45e-15!20;UBERON:0002619!3.51e-14!22;UBERON:0003056!8.58e-14!61;UBERON:0001894!3.44e-13!7;UBERON:0006222!3.44e-13!7;UBERON:0000956!1.68e-12!25;UBERON:0000203!1.68e-12!25;UBERON:0001049!5.47e-12!57;UBERON:0005068!5.47e-12!57;UBERON:0006241!5.47e-12!57;UBERON:0007135!5.47e-12!57;UBERON:0000955!7.34e-12!69;UBERON:0006238!7.34e-12!69;UBERON:0002616!1.51e-11!59;UBERON:0002702!5.05e-11!1;UBERON:0000996!5.57e-11!1;UBERON:0002346!6.05e-11!90;UBERON:0000073!3.70e-10!94;UBERON:0001016!3.70e-10!94;UBERON:0001017!8.46e-10!82;UBERON:0001869!9.19e-10!32;UBERON:0002791!1.83e-09!33;UBERON:0003075!2.07e-09!86;UBERON:0007284!2.07e-09!86;UBERON:0005743!2.75e-09!86;UBERON:0002020!3.51e-09!34;UBERON:0003528!3.51e-09!34;UBERON:0001893!3.51e-09!34;UBERON:0000033!1.86e-07!123;UBERON:0000153!4.88e-07!129;UBERON:0007811!4.88e-07!129;UBERON:0007023!9.02e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;2.84e-66;2!UBERON:0002757;2.84e-66;2!UBERON:0010134;2.84e-66;2!UBERON:0005408;2.84e-66;2!UBERON:0001899;2.84e-66;2!UBERON:0003296;8.36e-34;4!UBERON:0010133;8.36e-34;4!UBERON:0002784;8.36e-34;4!UBERON:0001894;7.84e-20;7!UBERON:0003714;6.48e-18;2!UBERON:0006955;1.17e-17;2!UBERON:0004801;1.17e-17;2!UBERON:0002346;1.12e-09;4!UBERON:0000923;1.12e-09;4!UBERON:0010316;1.12e-09;4!UBERON:0005291;1.12e-09;4!UBERON:0002050;5.35e-08;5!UBERON:0005423;5.35e-08;5!UBERON:0000013;5.73e-08;5!UBERON:0002410;5.73e-08;5!UBERON:0000002;9.23e-07;6!UBERON:0001560;9.23e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,2.84e-66,2;UBERON:0002757,2.84e-66,2;UBERON:0010134,2.84e-66,2;UBERON:0005408,2.84e-66,2;UBERON:0001899,2.84e-66,2;UBERON:0003296,8.36e-34,4;UBERON:0010133,8.36e-34,4;UBERON:0002784,8.36e-34,4;UBERON:0001894,7.84e-20,7;UBERON:0006222,7.84e-20,7;UBERON:0003714,6.48e-18,2;UBERON:0006955,1.07e-17,2;UBERON:0004801,1.07e-17,2;UBERON:0000013,5.73e-08,5;UBERON:0002410,5.73e-08,5;UBERON:0000002,8.97e-07,6;UBERON:0001560,8.97e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0.621984346622316,1.29707958075265,0.37872730027914,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0,0,1.51159648712566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0.122026264901963,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,32.2491806912648,0,0,7.82102885162541,0,0,0,0,0,0,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.67850917939143,2.01770233331294,0,0.91064876540519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316027223465453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.665756774185513,0,0 | |||
|short_description=p@chrX:2715113..2715130,+ | |||
}} |
Revision as of 04:41, 23 January 2014
Short description: | p@chrX:2715113..2715130, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chrX:2715113..2715130, + |
Coexpression cluster: | C415_neuroectodermal_eye_retina_thyroid_acute_adult_lymphoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of cervix | 1.07e-17 | 2 |
mast cell | 7.49e-08 | 5 |
basophil mast progenitor cell | 7.49e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
pineal body | 2.84e-66 | 2 |
regional part of epithalamus | 2.84e-66 | 2 |
secretory circumventricular organ | 2.84e-66 | 2 |
circumventricular organ | 2.84e-66 | 2 |
epithalamus | 2.84e-66 | 2 |
gland of diencephalon | 8.36e-34 | 4 |
neuroendocrine gland | 8.36e-34 | 4 |
regional part of diencephalon | 8.36e-34 | 4 |
diencephalon | 7.84e-20 | 7 |
future diencephalon | 7.84e-20 | 7 |
neural tissue | 6.48e-18 | 2 |
uterine epithelium | 1.07e-17 | 2 |
cervix epithelium | 1.07e-17 | 2 |
sympathetic nervous system | 5.73e-08 | 5 |
autonomic nervous system | 5.73e-08 | 5 |
uterine cervix | 8.97e-07 | 6 |
neck of organ | 8.97e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
peripheral nerve sheath neoplasm | 6.48e-18 | 2 |
neurofibroma | 6.48e-18 | 2 |
neuroectodermal tumor | 2.49e-14 | 10 |
peripheral nervous system neoplasm | 2.07e-12 | 3 |
cervical cancer | 7.01e-08 | 5 |
germ cell and embryonal cancer | 4.79e-07 | 22 |
germ cell cancer | 4.79e-07 | 22 |
neuroendocrine tumor | 7.58e-07 | 6 |