FFCP PHASE1:Hg19::chr9:35685631..35685657,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | ||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr9:35685631..35685657,+ | |||
|coexpression_cluster_id=C638 | |coexpression_cluster_id=C638 | ||
|description=CAGE_peak_at_chr9:35685631..35685657,+ | |description=CAGE_peak_at_chr9:35685631..35685657,+ | ||
Latest revision as of 01:48, 1 August 2015
| Short description: | p@chr9:35685631..35685657, + |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_at_chr9:35685631..35685657, + |
| Coexpression cluster: | C638_skeletal_tongue_Adipocyte_diaphragm_penis_throat_Smooth |
| Association with transcript: | NA |
| EntrezGene: | NA |
| HGNC: | NA |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
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CAGE Expression
| Sample | p@chr9:35685631..35685657+ |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| muscle precursor cell | 5.37e-33 | 58 |
| myoblast | 5.37e-33 | 58 |
| multi-potent skeletal muscle stem cell | 5.37e-33 | 58 |
| muscle cell | 7.20e-32 | 55 |
| electrically responsive cell | 1.07e-27 | 61 |
| electrically active cell | 1.07e-27 | 61 |
| smooth muscle cell | 1.24e-26 | 43 |
| smooth muscle myoblast | 1.24e-26 | 43 |
| vascular associated smooth muscle cell | 3.85e-22 | 32 |
| mesodermal cell | 2.68e-17 | 121 |
Showing 1 to 10 of 15 entries
| Ontology term | p-value | n |
|---|---|---|
| somite | 2.88e-39 | 71 |
| presomitic mesoderm | 2.88e-39 | 71 |
| presumptive segmental plate | 2.88e-39 | 71 |
| dermomyotome | 2.88e-39 | 71 |
| trunk paraxial mesoderm | 2.88e-39 | 71 |
| dense mesenchyme tissue | 3.42e-39 | 73 |
| paraxial mesoderm | 2.48e-38 | 72 |
| presumptive paraxial mesoderm | 2.48e-38 | 72 |
| skeletal muscle tissue | 7.01e-37 | 62 |
| striated muscle tissue | 7.01e-37 | 62 |
Showing 1 to 10 of 47 entries
