Personal tools

FFCP PHASE1:Mm9::chr10:128157290..128157311,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
Line 1: Line 1:
{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=33|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr10:128157290..128157311,+|id=chr10:128157290..128157311,+|ontology_enrichment_celltype=CL:0000791!5.29e-07!9;CL:0000789!5.29e-07!9;CL:0002420!5.29e-07!9;CL:0002419!5.29e-07!9;CL:0000790!5.29e-07!9;CL:0000838!9.59e-07!12|ontology_enrichment_celltype_v019_2=CL:0000791,1.58e-19,9;CL:0000789,1.58e-19,9;CL:0002420,1.58e-19,9;CL:0002419,1.58e-19,9;CL:0000790,1.58e-19,9;CL:0000838,2.89e-19,12;CL:0000542,9.93e-18,13;CL:0000051,9.93e-18,13;CL:0000084,6.74e-16,11;CL:0000827,6.74e-16,11;CL:0000624,2.19e-15,8;CL:0000738,2.18e-13,17;CL:0002087,2.18e-13,17;CL:0002031,7.38e-09,25;CL:0000893,5.48e-08,6;CL:0002489,5.48e-08,6;CL:0000898,5.48e-08,6;CL:0000809,5.48e-08,6;CL:0000810,5.48e-08,6;CL:0000895,5.48e-08,6;CL:0000808,5.48e-08,6;CL:0000894,5.48e-08,6;CL:0000806,5.48e-08,6;CL:0000807,5.48e-08,6;CL:0000805,5.48e-08,6;CL:0002425,5.48e-08,6;CL:0002436,5.48e-08,6;CL:0002427,5.48e-08,6;CL:0002428,5.48e-08,6;CL:0002429,5.48e-08,6;CL:0002433,5.48e-08,6;CL:0002431,5.48e-08,6;CL:0002432,5.48e-08,6;CL:0000988,9.52e-07,32;CL:0002032,9.52e-07,32;CL:0000037,9.52e-07,32;CL:0000837,9.52e-07,32|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003408!6.33e-10!24;UBERON:0002370!3.45e-09!23;UBERON:0000974!3.45e-09!23;UBERON:0004807!3.45e-09!23;UBERON:0005058!3.45e-09!23;UBERON:0003351!3.45e-09!23;UBERON:0009113!3.45e-09!23;UBERON:0003295!3.45e-09!23;UBERON:0009722!3.45e-09!23;UBERON:0005562!3.45e-09!23;UBERON:0007690!3.45e-09!23;UBERON:0004177!1.47e-08!29;UBERON:0006562!1.62e-08!24;UBERON:0001557!1.62e-08!24;UBERON:0001042!1.62e-08!24;UBERON:0008814!1.62e-08!24;UBERON:0009145!1.62e-08!24;UBERON:0001004!1.95e-08!42;UBERON:0000072!5.41e-08!27;UBERON:0000065!7.74e-08!41|ontology_enrichment_uberon_v019_2=UBERON:0003408,1.24e-14,24;UBERON:0000072,7.94e-13,27;UBERON:0002370,3.46e-12,23;UBERON:0000974,3.46e-12,23;UBERON:0004807,3.46e-12,23;UBERON:0005058,3.46e-12,23;UBERON:0003351,3.46e-12,23;UBERON:0009113,3.46e-12,23;UBERON:0003295,3.46e-12,23;UBERON:0009722,3.46e-12,23;UBERON:0005562,3.46e-12,23;UBERON:0007690,3.46e-12,23;UBERON:0001004,1.02e-11,42;UBERON:0006562,1.22e-11,24;UBERON:0001557,1.22e-11,24;UBERON:0001042,1.22e-11,24;UBERON:0008814,1.22e-11,24;UBERON:0009145,1.22e-11,24;UBERON:0000065,6.36e-10,41;UBERON:0004177,1.85e-09,29;UBERON:0005057,1.85e-09,29;UBERON:0007811,2.40e-09,36;UBERON:0000077,1.15e-07,35;UBERON:0000153,1.28e-07,43|phase1_expression=0.160148847104794,0,0.454999239389536,0,0,0,0,2.1950964985068,1.97104211012333,0.70219357896598,0.513653904676515,0,2.39681021903688,4.63328132820686,0,0.202475267389826,0,0.157731082679119,0.685572168028694,0.42438965179803,0.680346321208558,0.0992909512008853,0,0.639969691173627,0,0,0.430761996159075,0.215471232685889,0.380046838912748,0,0,0,0,0,0,0.166234645358492,0.408338712524738,0,1.5626706890476,0.523523743973798,0,0,0.485510353031154,0.251793635951155,0,0.367093504323363,0,0,0,0.194429899074283,0,0,1.17447824240415,2.90144856804538,5.37750078627942,0,0,0.515672092277442,0,0,0,0.338844532069132,0,0,0,0,0.299600110518405,0,0,0,0,0,0.220868540951614,0,0,0,0,0,0,0,0,0,0.558365998002762,0,0.30559649555362,0,0,0,0.075726193333184,0.377857800533928,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,1.01343946190039,0,0.79928715803342,0,0,0,0,0.230615497256059,0.150722640552623,0.117588707135705,0.125666591329675,0,0.144599356919912,0,0,0.220841518460394,0,0,0.292780797011547,0,0.510914110417183,0,0,0,0,0,0,0,0,0,0.162241263067758,0,0,0,0,0,0,0,0,0.0680364991513279,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0.284163499395593,0,0,0.180062061461015,0,0.196764231747404,0,0,0,0,0,0,0.162137619091711,0,0,0.268412837520744,0,0,0.330418782983798,0.528901133327089,0,0,0.128867461322093,0,0,0.190225626112559,1.42358718463353,0,0.502670417600539,0.397912944082302,0.19496408711912,1.79763881730844,0.864552199498777,0.995706366271836,0,0.114248512609729,0,0,0,0,0,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,1.29327233116623,0,0,0.169745085775188,0,0.167506257441816,0.476087281772027,0,0.315270288212382,0,0.159454768657487,0.491589944147214,0,0.144649058581512,0,0,0,0.275936746304732,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0.790575555893047,0,0,0.178065603667255,0,0,0,0,0,0.377210159511796,0,0,0,0.363533729477506,0,0.316036757935816,0,0,0,0,0,0,0.177340233642274,0,0.329098041204242,0.304464949114599,0,0.42366414172764,0,0,0.322928853391811,0.120625849856312,0,0.328281799490123,0.874442509889552,0.18542530201051,0.683483523191411,0,0,0,0.27338845544205,0.228778173206523,0,0,0,0.954670618015114,0,0.406638934253697,0,0.209088296014469,0.218362563746178,0,0.41326727862668,0,0.388844919875379,1.24267862617385,3.38215763210514,0,0,0,0.129159823477731,0,0,0,0,0.724752362478018,0.576060012515731,0.948033361884535,0.202725215290164,0,0.389762468933385,0.179026695667481,0.39736270956253,0.721172697119813,1.18151621739662,0.908698049533329,1.447929326445,1.51239277705261,0.974578807397524,1.53938946624527,1.5193997283604,0,0,0.448569283047378,0,0.19318959403219,0,0.36630324853453,0.857473516316263,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320919209591815,0,0,0,0,0.0640251524048693,0.0574354689556133,0,0,0,0.412085900803307,0.147198920134397,0.342869252385415,0.177475806159338,0,0,0,0,0,0,0,0,0,0.197008964751127,0.409231043169689,0,0,0,0.233931608445408,0.214871054048298,0,0.220591419119515,0|short_description=p@chr10:128157290..128157311,+}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=NA
|HGNC=
|MCL_coexpression_id=33
|TSSclassifier=NA
|UniProt=NA
|association_with_transcript=NA
|cluster_id=chr10:128157290..128157311,+
|description=CAGE_peak_at_chr10:128157290..128157311,+
|id=chr10:128157290..128157311,+
|ontology_enrichment_celltype=CL:0000791!5.29e-07!9;CL:0000789!5.29e-07!9;CL:0002420!5.29e-07!9;CL:0002419!5.29e-07!9;CL:0000790!5.29e-07!9;CL:0000838!9.59e-07!12
|ontology_enrichment_celltype_v019_2=CL:0000791,1.58e-19,9;CL:0000789,1.58e-19,9;CL:0002420,1.58e-19,9;CL:0002419,1.58e-19,9;CL:0000790,1.58e-19,9;CL:0000838,2.89e-19,12;CL:0000542,9.93e-18,13;CL:0000051,9.93e-18,13;CL:0000084,6.74e-16,11;CL:0000827,6.74e-16,11;CL:0000624,2.19e-15,8;CL:0000738,2.18e-13,17;CL:0002087,2.18e-13,17;CL:0002031,7.38e-09,25;CL:0000893,5.48e-08,6;CL:0002489,5.48e-08,6;CL:0000898,5.48e-08,6;CL:0000809,5.48e-08,6;CL:0000810,5.48e-08,6;CL:0000895,5.48e-08,6;CL:0000808,5.48e-08,6;CL:0000894,5.48e-08,6;CL:0000806,5.48e-08,6;CL:0000807,5.48e-08,6;CL:0000805,5.48e-08,6;CL:0002425,5.48e-08,6;CL:0002436,5.48e-08,6;CL:0002427,5.48e-08,6;CL:0002428,5.48e-08,6;CL:0002429,5.48e-08,6;CL:0002433,5.48e-08,6;CL:0002431,5.48e-08,6;CL:0002432,5.48e-08,6;CL:0000988,9.52e-07,32;CL:0002032,9.52e-07,32;CL:0000037,9.52e-07,32;CL:0000837,9.52e-07,32
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0003408!6.33e-10!24;UBERON:0002370!3.45e-09!23;UBERON:0000974!3.45e-09!23;UBERON:0004807!3.45e-09!23;UBERON:0005058!3.45e-09!23;UBERON:0003351!3.45e-09!23;UBERON:0009113!3.45e-09!23;UBERON:0003295!3.45e-09!23;UBERON:0009722!3.45e-09!23;UBERON:0005562!3.45e-09!23;UBERON:0007690!3.45e-09!23;UBERON:0004177!1.47e-08!29;UBERON:0006562!1.62e-08!24;UBERON:0001557!1.62e-08!24;UBERON:0001042!1.62e-08!24;UBERON:0008814!1.62e-08!24;UBERON:0009145!1.62e-08!24;UBERON:0001004!1.95e-08!42;UBERON:0000072!5.41e-08!27;UBERON:0000065!7.74e-08!41
|ontology_enrichment_uberon_v019_2=UBERON:0003408,1.24e-14,24;UBERON:0000072,7.94e-13,27;UBERON:0002370,3.46e-12,23;UBERON:0000974,3.46e-12,23;UBERON:0004807,3.46e-12,23;UBERON:0005058,3.46e-12,23;UBERON:0003351,3.46e-12,23;UBERON:0009113,3.46e-12,23;UBERON:0003295,3.46e-12,23;UBERON:0009722,3.46e-12,23;UBERON:0005562,3.46e-12,23;UBERON:0007690,3.46e-12,23;UBERON:0001004,1.02e-11,42;UBERON:0006562,1.22e-11,24;UBERON:0001557,1.22e-11,24;UBERON:0001042,1.22e-11,24;UBERON:0008814,1.22e-11,24;UBERON:0009145,1.22e-11,24;UBERON:0000065,6.36e-10,41;UBERON:0004177,1.85e-09,29;UBERON:0005057,1.85e-09,29;UBERON:0007811,2.40e-09,36;UBERON:0000077,1.15e-07,35;UBERON:0000153,1.28e-07,43
|phase1_expression=0.160148847104794,0,0.454999239389536,0,0,0,0,2.1950964985068,1.97104211012333,0.70219357896598,0.513653904676515,0,2.39681021903688,4.63328132820686,0,0.202475267389826,0,0.157731082679119,0.685572168028694,0.42438965179803,0.680346321208558,0.0992909512008853,0,0.639969691173627,0,0,0.430761996159075,0.215471232685889,0.380046838912748,0,0,0,0,0,0,0.166234645358492,0.408338712524738,0,1.5626706890476,0.523523743973798,0,0,0.485510353031154,0.251793635951155,0,0.367093504323363,0,0,0,0.194429899074283,0,0,1.17447824240415,2.90144856804538,5.37750078627942,0,0,0.515672092277442,0,0,0,0.338844532069132,0,0,0,0,0.299600110518405,0,0,0,0,0,0.220868540951614,0,0,0,0,0,0,0,0,0,0.558365998002762,0,0.30559649555362,0,0,0,0.075726193333184,0.377857800533928,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,1.01343946190039,0,0.79928715803342,0,0,0,0,0.230615497256059,0.150722640552623,0.117588707135705,0.125666591329675,0,0.144599356919912,0,0,0.220841518460394,0,0,0.292780797011547,0,0.510914110417183,0,0,0,0,0,0,0,0,0,0.162241263067758,0,0,0,0,0,0,0,0,0.0680364991513279,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0.284163499395593,0,0,0.180062061461015,0,0.196764231747404,0,0,0,0,0,0,0.162137619091711,0,0,0.268412837520744,0,0,0.330418782983798,0.528901133327089,0,0,0.128867461322093,0,0,0.190225626112559,1.42358718463353,0,0.502670417600539,0.397912944082302,0.19496408711912,1.79763881730844,0.864552199498777,0.995706366271836,0,0.114248512609729,0,0,0,0,0,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,1.29327233116623,0,0,0.169745085775188,0,0.167506257441816,0.476087281772027,0,0.315270288212382,0,0.159454768657487,0.491589944147214,0,0.144649058581512,0,0,0,0.275936746304732,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0.790575555893047,0,0,0.178065603667255,0,0,0,0,0,0.377210159511796,0,0,0,0.363533729477506,0,0.316036757935816,0,0,0,0,0,0,0.177340233642274,0,0.329098041204242,0.304464949114599,0,0.42366414172764,0,0,0.322928853391811,0.120625849856312,0,0.328281799490123,0.874442509889552,0.18542530201051,0.683483523191411,0,0,0,0.27338845544205,0.228778173206523,0,0,0,0.954670618015114,0,0.406638934253697,0,0.209088296014469,0.218362563746178,0,0.41326727862668,0,0.388844919875379,1.24267862617385,3.38215763210514,0,0,0,0.129159823477731,0,0,0,0,0.724752362478018,0.576060012515731,0.948033361884535,0.202725215290164,0,0.389762468933385,0.179026695667481,0.39736270956253,0.721172697119813,1.18151621739662,0.908698049533329,1.447929326445,1.51239277705261,0.974578807397524,1.53938946624527,1.5193997283604,0,0,0.448569283047378,0,0.19318959403219,0,0.36630324853453,0.857473516316263,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320919209591815,0,0,0,0,0.0640251524048693,0.0574354689556133,0,0,0,0.412085900803307,0.147198920134397,0.342869252385415,0.177475806159338,0,0,0,0,0,0,0,0,0,0.197008964751127,0.409231043169689,0,0,0,0.233931608445408,0.214871054048298,0,0.220591419119515,0
|short_description=p@chr10:128157290..128157311,+
}}

Latest revision as of 03:07, 4 August 2015

Short description:p@chr10:128157290..128157311, +
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_at_chr10:128157290..128157311, +
Coexpression cluster:MCL_coexpression_mm9:33
Association with transcript: NA
EntrezGene:NA
Link to Zenbu:ZENBU


View on UCSC genome browser


Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression




0
1
2
3
4
5
6




  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data