FFCP PHASE1:Mm9::chr19:56738145..56738187,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=2167|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr19:56738145..56738187,-|id=chr19:56738145..56738187,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000068,1.48e-12,3;CL:0002202,1.48e-12,3;CL:0000069,1.48e-12,3;CL:0002632,1.48e-12,3;CL:0002368,1.48e-12,3;CL:0000307,1.48e-12,3;CL:0000377,1.48e-12,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005178!6.12e-22!17;UBERON:0005181!6.12e-22!17;UBERON:0002224!6.12e-22!17;UBERON:0000915!6.12e-22!17;UBERON:0008947!6.12e-22!17;UBERON:0003258!6.12e-22!17;UBERON:0002048!4.05e-18!14;UBERON:0000117!4.05e-18!14;UBERON:0000171!4.05e-18!14;UBERON:0000170!4.05e-18!14;UBERON:0005597!4.05e-18!14;UBERON:0000118!4.05e-18!14;UBERON:0005153!5.97e-16!17;UBERON:0001004!3.65e-14!42;UBERON:0000065!3.95e-13!41;UBERON:0000077!1.08e-11!97;UBERON:0001041!2.60e-11!92;UBERON:0005157!2.87e-08!27;UBERON:0000310!7.76e-08!6;UBERON:0001443!7.76e-08!6;UBERON:0000464!9.83e-07!57|ontology_enrichment_uberon_v019_2=UBERON:0005178,3.40e-44,17;UBERON:0005181,3.40e-44,17;UBERON:0002224,3.40e-44,17;UBERON:0000915,3.40e-44,17;UBERON:0008947,3.40e-44,17;UBERON:0003258,3.40e-44,17;UBERON:0002048,2.58e-33,14;UBERON:0000117,2.58e-33,14;UBERON:0000171,2.58e-33,14;UBERON:0000170,2.58e-33,14;UBERON:0005597,2.58e-33,14;UBERON:0000118,2.58e-33,14;UBERON:0005153,4.13e-27,17;UBERON:0005157,9.18e-23,20;UBERON:0001004,4.08e-19,42;UBERON:0000065,7.34e-17,41;UBERON:0001041,9.82e-15,80;UBERON:0003126,1.48e-12,3;UBERON:0001005,1.48e-12,3;UBERON:0007196,1.48e-12,3;UBERON:0001558,1.48e-12,3;UBERON:0009569,1.69e-09,66;UBERON:0004921,2.49e-09,114;UBERON:0001007,4.13e-09,116;UBERON:0001555,4.13e-09,116;UBERON:0007026,4.13e-09,116;UBERON:0004119,6.74e-09,118;UBERON:0000925,6.74e-09,118;UBERON:0006595,6.74e-09,118;UBERON:0005177,9.71e-09,79;UBERON:0002100,2.48e-07,90|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19060606211498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.46385665617943,3.29367825117628,4.54972000513305,0.68510327831436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68353484709179,0,0,0,0,0.0680364991513279,0,0,1.03481348295606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.462801338662135,0,0,0.116765342367169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0.372140947668503,0,0,0,0,12.0089573608293,0.189491411770485,0.814824882210129,0.678980343100753,1.40814148973101,2.1775813467436,2.85652369063216,4.48807390072937,5.04432461139811,6.64394068946325,4.46473352240964,6.882259218061,5.52591941970866,7.95569822198314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188605079755898,0,0,0,0,0.356497378384721,0.316036757935816,1.05418608574999,0,0,0,0,0,0,0.178368817602071,0,0,0,0.42366414172764,0.220528398054962,0.16488625294148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.90934123603023,0,0.203319467126849,0.648032044930808,1.04544148007234,0.655087691238533,0.269728692769641,1.07449492442937,1.04702376793612,0,9.94142900939081,0.56369293868419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0.201932899896295,0.0762068066549998,0.100826185136841,0.292373642219257,0.0962118416403295,0.116876902181569,0.680191150845634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486213434136588,0.209613162627982,0,0,0.206035057238894,0.64183841918363,0,0.760437899670719,0.565879024158229,0.0936415074698824,0.128050304809739,0.287177344778066,0,0.231768651889711,0.192909220463705,0.412085900803307,0.588795680537589,0,0.177475806159338,0.238436189947321,0.436039249896986,0,0.338458431566706,0.365855945745545,0,0.407412341537585,0.561142271657738,0.118635018124174,0.29551344712669,0.818462086339379,0.154936841185966,0,0.499621155875892,0.233931608445408,0.429742108096597,0,0,0|short_description=p@chr19:56738145..56738187,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=2167 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr19:56738145..56738187,- | |||
|description=CAGE_peak_at_chr19:56738145..56738187,- | |||
|id=chr19:56738145..56738187,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000068,1.48e-12,3;CL:0002202,1.48e-12,3;CL:0000069,1.48e-12,3;CL:0002632,1.48e-12,3;CL:0002368,1.48e-12,3;CL:0000307,1.48e-12,3;CL:0000377,1.48e-12,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005178!6.12e-22!17;UBERON:0005181!6.12e-22!17;UBERON:0002224!6.12e-22!17;UBERON:0000915!6.12e-22!17;UBERON:0008947!6.12e-22!17;UBERON:0003258!6.12e-22!17;UBERON:0002048!4.05e-18!14;UBERON:0000117!4.05e-18!14;UBERON:0000171!4.05e-18!14;UBERON:0000170!4.05e-18!14;UBERON:0005597!4.05e-18!14;UBERON:0000118!4.05e-18!14;UBERON:0005153!5.97e-16!17;UBERON:0001004!3.65e-14!42;UBERON:0000065!3.95e-13!41;UBERON:0000077!1.08e-11!97;UBERON:0001041!2.60e-11!92;UBERON:0005157!2.87e-08!27;UBERON:0000310!7.76e-08!6;UBERON:0001443!7.76e-08!6;UBERON:0000464!9.83e-07!57 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005178,3.40e-44,17;UBERON:0005181,3.40e-44,17;UBERON:0002224,3.40e-44,17;UBERON:0000915,3.40e-44,17;UBERON:0008947,3.40e-44,17;UBERON:0003258,3.40e-44,17;UBERON:0002048,2.58e-33,14;UBERON:0000117,2.58e-33,14;UBERON:0000171,2.58e-33,14;UBERON:0000170,2.58e-33,14;UBERON:0005597,2.58e-33,14;UBERON:0000118,2.58e-33,14;UBERON:0005153,4.13e-27,17;UBERON:0005157,9.18e-23,20;UBERON:0001004,4.08e-19,42;UBERON:0000065,7.34e-17,41;UBERON:0001041,9.82e-15,80;UBERON:0003126,1.48e-12,3;UBERON:0001005,1.48e-12,3;UBERON:0007196,1.48e-12,3;UBERON:0001558,1.48e-12,3;UBERON:0009569,1.69e-09,66;UBERON:0004921,2.49e-09,114;UBERON:0001007,4.13e-09,116;UBERON:0001555,4.13e-09,116;UBERON:0007026,4.13e-09,116;UBERON:0004119,6.74e-09,118;UBERON:0000925,6.74e-09,118;UBERON:0006595,6.74e-09,118;UBERON:0005177,9.71e-09,79;UBERON:0002100,2.48e-07,90 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19060606211498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.46385665617943,3.29367825117628,4.54972000513305,0.68510327831436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68353484709179,0,0,0,0,0.0680364991513279,0,0,1.03481348295606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.462801338662135,0,0,0.116765342367169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0.372140947668503,0,0,0,0,12.0089573608293,0.189491411770485,0.814824882210129,0.678980343100753,1.40814148973101,2.1775813467436,2.85652369063216,4.48807390072937,5.04432461139811,6.64394068946325,4.46473352240964,6.882259218061,5.52591941970866,7.95569822198314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188605079755898,0,0,0,0,0.356497378384721,0.316036757935816,1.05418608574999,0,0,0,0,0,0,0.178368817602071,0,0,0,0.42366414172764,0.220528398054962,0.16488625294148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.90934123603023,0,0.203319467126849,0.648032044930808,1.04544148007234,0.655087691238533,0.269728692769641,1.07449492442937,1.04702376793612,0,9.94142900939081,0.56369293868419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0.201932899896295,0.0762068066549998,0.100826185136841,0.292373642219257,0.0962118416403295,0.116876902181569,0.680191150845634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486213434136588,0.209613162627982,0,0,0.206035057238894,0.64183841918363,0,0.760437899670719,0.565879024158229,0.0936415074698824,0.128050304809739,0.287177344778066,0,0.231768651889711,0.192909220463705,0.412085900803307,0.588795680537589,0,0.177475806159338,0.238436189947321,0.436039249896986,0,0.338458431566706,0.365855945745545,0,0.407412341537585,0.561142271657738,0.118635018124174,0.29551344712669,0.818462086339379,0.154936841185966,0,0.499621155875892,0.233931608445408,0.429742108096597,0,0,0 | |||
|short_description=p@chr19:56738145..56738187,- | |||
}} |
Latest revision as of 09:25, 4 August 2015
Short description: | p@chr19:56738145..56738187, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:56738145..56738187, - |
Coexpression cluster: | MCL_coexpression_mm9:2167 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 1.48e-12 | 3 |
epithelial cell of tracheobronchial tree | 1.48e-12 | 3 |
branched duct epithelial cell | 1.48e-12 | 3 |
epithelial cell of lower respiratory tract | 1.48e-12 | 3 |
respiratory epithelial cell | 1.48e-12 | 3 |
tracheal epithelial cell | 1.48e-12 | 3 |
tracheoblast | 1.48e-12 | 3 |
Ontology term | p-value | n |
---|---|---|
thoracic cavity element | 3.40e-44 | 17 |
thoracic segment organ | 3.40e-44 | 17 |
thoracic cavity | 3.40e-44 | 17 |
thoracic segment of trunk | 3.40e-44 | 17 |
respiratory primordium | 3.40e-44 | 17 |
endoderm of foregut | 3.40e-44 | 17 |
lung | 2.58e-33 | 14 |
respiratory tube | 2.58e-33 | 14 |
respiration organ | 2.58e-33 | 14 |
pair of lungs | 2.58e-33 | 14 |
lung primordium | 2.58e-33 | 14 |
lung bud | 2.58e-33 | 14 |
epithelial bud | 4.13e-27 | 17 |
epithelial fold | 9.18e-23 | 20 |
respiratory system | 4.08e-19 | 42 |
respiratory tract | 7.34e-17 | 41 |
foregut | 9.82e-15 | 80 |
trachea | 1.48e-12 | 3 |
respiratory airway | 1.48e-12 | 3 |
tracheobronchial tree | 1.48e-12 | 3 |
lower respiratory tract | 1.48e-12 | 3 |
subdivision of trunk | 1.69e-09 | 66 |
subdivision of digestive tract | 2.49e-09 | 114 |
digestive system | 4.13e-09 | 116 |
digestive tract | 4.13e-09 | 116 |
primitive gut | 4.13e-09 | 116 |
endoderm-derived structure | 6.74e-09 | 118 |
endoderm | 6.74e-09 | 118 |
presumptive endoderm | 6.74e-09 | 118 |
trunk region element | 9.71e-09 | 79 |
trunk | 2.48e-07 | 90 |