FFCP PHASE1:Mm9::chr4:101897495..101897500,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=39|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr4:101897495..101897500,+|id=chr4:101897495..101897500,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002021!5.47e-08!10;UBERON:0000411!5.47e-08!10;UBERON:0001950!5.47e-08!10;UBERON:0000033!2.90e-07!63;UBERON:0002616!3.24e-07!49;UBERON:0000955!6.07e-07!50;UBERON:0006238!6.07e-07!50;UBERON:0002346!8.78e-07!71;UBERON:0003075!8.78e-07!71;UBERON:0007284!8.78e-07!71|ontology_enrichment_uberon_v019_2=UBERON:0002037,2.95e-12,4;UBERON:0002680,2.95e-12,4;UBERON:0001895,2.95e-12,4;UBERON:0010092,2.95e-12,4;UBERON:0006215,2.95e-12,4;UBERON:0001851,5.53e-12,1;UBERON:0005889,5.53e-12,1;UBERON:0002021,2.01e-10,10;UBERON:0000411,2.01e-10,10;UBERON:0001950,2.01e-10,10;UBERON:0002616,1.12e-08,46;UBERON:0000955,1.71e-08,47;UBERON:0006238,1.71e-08,47;UBERON:0004733,1.75e-08,6;UBERON:0004732,1.75e-08,6;UBERON:0002028,1.75e-08,6;UBERON:0007277,1.75e-08,6;UBERON:0001049,1.13e-07,52;UBERON:0005068,1.13e-07,52;UBERON:0006241,1.13e-07,52;UBERON:0007135,1.13e-07,52;UBERON:0000073,2.17e-07,54|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286533439938757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0.307213066512487,0,0,0,0,1.68828783009504,0.916789486660861,0,0.284743361598206,0,0,0,0.869593466105033,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,2.92780797011547,5.86450779077674,0,0,0,0,0.748953197024114,0,0.125654352112864,0.869121600961382,1.53429274398198,0.62336413367868,0.811206315338788,0,0,0,0.210441855886474,0.130120442962704,0,0,0.150704817835715,0,0,0.187403449119458,0.517406741478031,0,0,0,0,0,0.348252166522167,0,0,0,0,0,0.207125772535502,0.234526059981096,0,0,0,0,0.232533944750408,0,0,0,0,0,0,0,0,0.420579897128254,0,0,0,0,0.232236671860439,0.128867461322093,0.201683524623343,0,0.190225626112559,0.474529061544512,0.164698954724011,0.754005626400808,0.198956472041151,0.19496408711912,1.79763881730844,0.432276099749388,0.199141273254367,0,0.114248512609729,0,0,0,0,0.126473074248515,0.147610147979602,0.156998727841375,0.246794327843601,0,0,0,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0.369506380333209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.642202359951168,0.468846746368813,0,0,0,0,0.215423397732799,0,0.222798674082394,0.283076530788832,0.809621403349789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.356497378384721,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291480836629851,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0.216010681643603,0,0,0.269728692769641,0.0826534557253359,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0.460325236507177,0,2.06223818812425,0.685082519770642,0,1.35004500046361,0.900642406448441,0.453142408984205,1.55328093525546,0,0,0.170733605754134,0.243106717068294,0,0,0,0,0,0.252697211763798,0,0,0.0936415074698824,0.0640251524048693,0.0574354689556133,0,0.115884325944855,0,0.412085900803307,0,0.342869252385415,0.177475806159338,0.238436189947321,0,0.0941093804153306,0.169229215783353,0.182927972872773,0,0.135804113845862,0,0.237270036248348,0.197008964751127,0,0,0,0,0.233931608445408,0,0,0,0|short_description=p@chr4:101897495..101897500,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=39 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr4:101897495..101897500,+ | |||
|description=CAGE_peak_at_chr4:101897495..101897500,+ | |||
|id=chr4:101897495..101897500,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002021!5.47e-08!10;UBERON:0000411!5.47e-08!10;UBERON:0001950!5.47e-08!10;UBERON:0000033!2.90e-07!63;UBERON:0002616!3.24e-07!49;UBERON:0000955!6.07e-07!50;UBERON:0006238!6.07e-07!50;UBERON:0002346!8.78e-07!71;UBERON:0003075!8.78e-07!71;UBERON:0007284!8.78e-07!71 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,2.95e-12,4;UBERON:0002680,2.95e-12,4;UBERON:0001895,2.95e-12,4;UBERON:0010092,2.95e-12,4;UBERON:0006215,2.95e-12,4;UBERON:0001851,5.53e-12,1;UBERON:0005889,5.53e-12,1;UBERON:0002021,2.01e-10,10;UBERON:0000411,2.01e-10,10;UBERON:0001950,2.01e-10,10;UBERON:0002616,1.12e-08,46;UBERON:0000955,1.71e-08,47;UBERON:0006238,1.71e-08,47;UBERON:0004733,1.75e-08,6;UBERON:0004732,1.75e-08,6;UBERON:0002028,1.75e-08,6;UBERON:0007277,1.75e-08,6;UBERON:0001049,1.13e-07,52;UBERON:0005068,1.13e-07,52;UBERON:0006241,1.13e-07,52;UBERON:0007135,1.13e-07,52;UBERON:0000073,2.17e-07,54 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286533439938757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0.307213066512487,0,0,0,0,1.68828783009504,0.916789486660861,0,0.284743361598206,0,0,0,0.869593466105033,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,2.92780797011547,5.86450779077674,0,0,0,0,0.748953197024114,0,0.125654352112864,0.869121600961382,1.53429274398198,0.62336413367868,0.811206315338788,0,0,0,0.210441855886474,0.130120442962704,0,0,0.150704817835715,0,0,0.187403449119458,0.517406741478031,0,0,0,0,0,0.348252166522167,0,0,0,0,0,0.207125772535502,0.234526059981096,0,0,0,0,0.232533944750408,0,0,0,0,0,0,0,0,0.420579897128254,0,0,0,0,0.232236671860439,0.128867461322093,0.201683524623343,0,0.190225626112559,0.474529061544512,0.164698954724011,0.754005626400808,0.198956472041151,0.19496408711912,1.79763881730844,0.432276099749388,0.199141273254367,0,0.114248512609729,0,0,0,0,0.126473074248515,0.147610147979602,0.156998727841375,0.246794327843601,0,0,0,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0.369506380333209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.642202359951168,0.468846746368813,0,0,0,0,0.215423397732799,0,0.222798674082394,0.283076530788832,0.809621403349789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.356497378384721,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291480836629851,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0.216010681643603,0,0,0.269728692769641,0.0826534557253359,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0.460325236507177,0,2.06223818812425,0.685082519770642,0,1.35004500046361,0.900642406448441,0.453142408984205,1.55328093525546,0,0,0.170733605754134,0.243106717068294,0,0,0,0,0,0.252697211763798,0,0,0.0936415074698824,0.0640251524048693,0.0574354689556133,0,0.115884325944855,0,0.412085900803307,0,0.342869252385415,0.177475806159338,0.238436189947321,0,0.0941093804153306,0.169229215783353,0.182927972872773,0,0.135804113845862,0,0.237270036248348,0.197008964751127,0,0,0,0,0.233931608445408,0,0,0,0 | |||
|short_description=p@chr4:101897495..101897500,+ | |||
}} |
Latest revision as of 10:54, 4 August 2015
Short description: | p@chr4:101897495..101897500, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:101897495..101897500, + |
Coexpression cluster: | MCL_coexpression_mm9:39 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cerebellum | 2.95e-12 | 4 |
regional part of metencephalon | 2.95e-12 | 4 |
metencephalon | 2.95e-12 | 4 |
future metencephalon | 2.95e-12 | 4 |
rhombic lip | 2.95e-12 | 4 |
cortex | 5.53e-12 | 1 |
zygote cortex | 5.53e-12 | 1 |
occipital lobe | 2.01e-10 | 10 |
visual cortex | 2.01e-10 | 10 |
neocortex | 2.01e-10 | 10 |
regional part of brain | 1.12e-08 | 46 |
brain | 1.71e-08 | 47 |
future brain | 1.71e-08 | 47 |
segmental subdivision of hindbrain | 1.75e-08 | 6 |
segmental subdivision of nervous system | 1.75e-08 | 6 |
hindbrain | 1.75e-08 | 6 |
presumptive hindbrain | 1.75e-08 | 6 |
neural tube | 1.13e-07 | 52 |
neural rod | 1.13e-07 | 52 |
future spinal cord | 1.13e-07 | 52 |
neural keel | 1.13e-07 | 52 |
regional part of nervous system | 2.17e-07 | 54 |