FFCP PHASE1:Mm9::chr5:77778263..77778301,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=1394|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr5:77778263..77778301,+|id=chr5:77778263..77778301,+|ontology_enrichment_celltype=CL:0000222!3.99e-08!7;CL:0000680!4.11e-07!6;CL:0000183!4.11e-07!6;CL:0000187!4.11e-07!6;CL:0000056!4.11e-07!6|ontology_enrichment_celltype_v019_2=CL:0000068,3.67e-34,3;CL:0002202,3.67e-34,3;CL:0000069,3.67e-34,3;CL:0002632,3.67e-34,3;CL:0002368,3.67e-34,3;CL:0000307,3.67e-34,3;CL:0000377,3.67e-34,3;CL:0002494,3.61e-33,3;CL:0000737,3.61e-33,3;CL:0000746,3.61e-33,3;CL:0000513,3.61e-33,3;CL:0000680,5.29e-17,6;CL:0000187,5.29e-17,6;CL:0000056,5.29e-17,6;CL:0000222,1.11e-14,7;CL:0000057,5.53e-12,1;CL:0000632,5.53e-12,1;CL:0000355,1.41e-11,9;CL:0002076,2.17e-07,15|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002100!3.69e-10!98|ontology_enrichment_uberon_v019_2=UBERON:0003126,3.67e-34,3;UBERON:0001005,3.67e-34,3;UBERON:0007196,3.67e-34,3;UBERON:0001558,3.67e-34,3;UBERON:0001134,1.41e-11,9;UBERON:0002036,1.41e-11,9;UBERON:0002385,1.41e-11,9;UBERON:0000486,1.41e-11,9;UBERON:0007503,1.41e-11,9;UBERON:0001015,1.41e-11,9;UBERON:0002329,1.41e-11,9;UBERON:0003082,1.41e-11,9;UBERON:0003059,1.41e-11,9;UBERON:0007282,1.41e-11,9;UBERON:0004290,1.41e-11,9;UBERON:0009618,1.41e-11,9;UBERON:0000383,1.74e-10,10;UBERON:0007524,1.36e-09,11;UBERON:0003077,1.36e-09,11;UBERON:0007285,1.36e-09,11;UBERON:0003103,2.42e-09,43|phase1_expression=0.160148847104794,0,0,0.30246421130683,0,0,0,0.129123323441576,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0.261199789138935,0,0,0.57423196411502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0.405507724878058,0.550640256485045,0,0,0,0.388859798148567,0.139986421625363,0,0,0,0,3.08711323243136,5.15760191889762,10.8291139378263,0,0.528990979272033,0,0.338844532069132,0,0.899899717281399,0.988866362566974,0,0.599200221036809,0.768436610643109,0,0.135005938331691,0,0.285650984403804,0.441737081903227,0.122490799214954,0,0,0,0,0,0,0.0914876436024097,0,0,0,0.15279824777681,0.294628585473668,0.142371680799103,0.186399445825301,0.075726193333184,0,0.869593466105033,2.58127163094416,0,0,0.649776417447669,0.448026887097336,0,0.170430322578058,1.81850203222008,0.35333957451034,0,0,0,0,14.9378818297738,12.1612735428047,14.1546844604139,0.34255163915718,0,0,0.346970653532272,0,0.691846491768175,0.753613202763113,0,0.251333182659351,0,0,0,0,0,0.969750506270444,0,0,0,0,0,0,0,0,0,0,0.173824320192276,0,0,0,0,0,0.252722758433675,0,0,0,0,0.150704817835715,0,0.12811372028485,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438599962275997,0,0.134206418760372,0,0,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0.189667900953082,0.114248512609729,0,0,0.193952487167626,0.0701358198903186,0.252946148497029,0.147610147979602,0.156998727841375,0.493588655687202,0,0,0,0,0,0,0,0,0.162135226775035,0.274561413188081,0,0.372140947668503,0.312037673114561,0,0.179397413521912,0,0,0,0,0,0,0,0,0,0.315270288212382,0,0.159454768657487,0.163863314715738,0.518054945597687,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0.162886959353576,0,0,0,0,0,0,0,0,0.727067458955011,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0.220528398054962,0,0,0,0.119372344003136,0.164140899745061,0.291480836629851,0,0,0.206386867963223,0.185194527369712,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0,0.785267825952089,0,0,0,0,0.496375471371293,0,0.774958940866387,0.168956125490778,0.117357238645754,0,0,0,0.288030006257865,0,0,0,0,0,0,0.240390899039938,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0.187682475451182,0,0.214368379079066,0,0,0,0.572895513439397,0.171853182343688,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0,0.222246727801615,0,0,0,0,0,0.0936415074698824,0.0640251524048693,0,0,0,0,0,0,0.342869252385415,0,0,0,0,0,0,0,0.135804113845862,0,0,0,0,0,0.192906610981141,0,0.233931608445408,0,0,0,0|short_description=p@chr5:77778263..77778301,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=1394 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr5:77778263..77778301,+ | |||
|description=CAGE_peak_at_chr5:77778263..77778301,+ | |||
|id=chr5:77778263..77778301,+ | |||
|ontology_enrichment_celltype=CL:0000222!3.99e-08!7;CL:0000680!4.11e-07!6;CL:0000183!4.11e-07!6;CL:0000187!4.11e-07!6;CL:0000056!4.11e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000068,3.67e-34,3;CL:0002202,3.67e-34,3;CL:0000069,3.67e-34,3;CL:0002632,3.67e-34,3;CL:0002368,3.67e-34,3;CL:0000307,3.67e-34,3;CL:0000377,3.67e-34,3;CL:0002494,3.61e-33,3;CL:0000737,3.61e-33,3;CL:0000746,3.61e-33,3;CL:0000513,3.61e-33,3;CL:0000680,5.29e-17,6;CL:0000187,5.29e-17,6;CL:0000056,5.29e-17,6;CL:0000222,1.11e-14,7;CL:0000057,5.53e-12,1;CL:0000632,5.53e-12,1;CL:0000355,1.41e-11,9;CL:0002076,2.17e-07,15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002100!3.69e-10!98 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003126,3.67e-34,3;UBERON:0001005,3.67e-34,3;UBERON:0007196,3.67e-34,3;UBERON:0001558,3.67e-34,3;UBERON:0001134,1.41e-11,9;UBERON:0002036,1.41e-11,9;UBERON:0002385,1.41e-11,9;UBERON:0000486,1.41e-11,9;UBERON:0007503,1.41e-11,9;UBERON:0001015,1.41e-11,9;UBERON:0002329,1.41e-11,9;UBERON:0003082,1.41e-11,9;UBERON:0003059,1.41e-11,9;UBERON:0007282,1.41e-11,9;UBERON:0004290,1.41e-11,9;UBERON:0009618,1.41e-11,9;UBERON:0000383,1.74e-10,10;UBERON:0007524,1.36e-09,11;UBERON:0003077,1.36e-09,11;UBERON:0007285,1.36e-09,11;UBERON:0003103,2.42e-09,43 | |||
|phase1_expression=0.160148847104794,0,0,0.30246421130683,0,0,0,0.129123323441576,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0.261199789138935,0,0,0.57423196411502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0.405507724878058,0.550640256485045,0,0,0,0.388859798148567,0.139986421625363,0,0,0,0,3.08711323243136,5.15760191889762,10.8291139378263,0,0.528990979272033,0,0.338844532069132,0,0.899899717281399,0.988866362566974,0,0.599200221036809,0.768436610643109,0,0.135005938331691,0,0.285650984403804,0.441737081903227,0.122490799214954,0,0,0,0,0,0,0.0914876436024097,0,0,0,0.15279824777681,0.294628585473668,0.142371680799103,0.186399445825301,0.075726193333184,0,0.869593466105033,2.58127163094416,0,0,0.649776417447669,0.448026887097336,0,0.170430322578058,1.81850203222008,0.35333957451034,0,0,0,0,14.9378818297738,12.1612735428047,14.1546844604139,0.34255163915718,0,0,0.346970653532272,0,0.691846491768175,0.753613202763113,0,0.251333182659351,0,0,0,0,0,0.969750506270444,0,0,0,0,0,0,0,0,0,0,0.173824320192276,0,0,0,0,0,0.252722758433675,0,0,0,0,0.150704817835715,0,0.12811372028485,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438599962275997,0,0.134206418760372,0,0,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0.189667900953082,0.114248512609729,0,0,0.193952487167626,0.0701358198903186,0.252946148497029,0.147610147979602,0.156998727841375,0.493588655687202,0,0,0,0,0,0,0,0,0.162135226775035,0.274561413188081,0,0.372140947668503,0.312037673114561,0,0.179397413521912,0,0,0,0,0,0,0,0,0,0.315270288212382,0,0.159454768657487,0.163863314715738,0.518054945597687,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0.162886959353576,0,0,0,0,0,0,0,0,0.727067458955011,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0.220528398054962,0,0,0,0.119372344003136,0.164140899745061,0.291480836629851,0,0,0.206386867963223,0.185194527369712,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0,0.785267825952089,0,0,0,0,0.496375471371293,0,0.774958940866387,0.168956125490778,0.117357238645754,0,0,0,0.288030006257865,0,0,0,0,0,0,0.240390899039938,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0.187682475451182,0,0.214368379079066,0,0,0,0.572895513439397,0.171853182343688,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0,0.222246727801615,0,0,0,0,0,0.0936415074698824,0.0640251524048693,0,0,0,0,0,0,0.342869252385415,0,0,0,0,0,0,0,0.135804113845862,0,0,0,0,0,0.192906610981141,0,0.233931608445408,0,0,0,0 | |||
|short_description=p@chr5:77778263..77778301,+ | |||
}} |
Latest revision as of 15:21, 4 August 2015
Short description: | p@chr5:77778263..77778301, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:77778263..77778301, + |
Coexpression cluster: | MCL_coexpression_mm9:1394 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 3.67e-34 | 3 |
epithelial cell of tracheobronchial tree | 3.67e-34 | 3 |
branched duct epithelial cell | 3.67e-34 | 3 |
epithelial cell of lower respiratory tract | 3.67e-34 | 3 |
respiratory epithelial cell | 3.67e-34 | 3 |
tracheal epithelial cell | 3.67e-34 | 3 |
tracheoblast | 3.67e-34 | 3 |
cardiocyte | 3.61e-33 | 3 |
striated muscle cell | 3.61e-33 | 3 |
cardiac muscle cell | 3.61e-33 | 3 |
cardiac muscle myoblast | 3.61e-33 | 3 |
muscle precursor cell | 5.29e-17 | 6 |
muscle cell | 5.29e-17 | 6 |
myoblast | 5.29e-17 | 6 |
mesodermal cell | 1.11e-14 | 7 |
fibroblast | 5.53e-12 | 1 |
hepatic stellate cell | 5.53e-12 | 1 |
multi-potent skeletal muscle stem cell | 1.41e-11 | 9 |
endo-epithelial cell | 2.17e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
trachea | 3.67e-34 | 3 |
respiratory airway | 3.67e-34 | 3 |
tracheobronchial tree | 3.67e-34 | 3 |
lower respiratory tract | 3.67e-34 | 3 |
skeletal muscle tissue | 1.41e-11 | 9 |
striated muscle tissue | 1.41e-11 | 9 |
muscle tissue | 1.41e-11 | 9 |
multilaminar epithelium | 1.41e-11 | 9 |
epithelial vesicle | 1.41e-11 | 9 |
musculature | 1.41e-11 | 9 |
somite | 1.41e-11 | 9 |
myotome | 1.41e-11 | 9 |
presomitic mesoderm | 1.41e-11 | 9 |
presumptive segmental plate | 1.41e-11 | 9 |
dermomyotome | 1.41e-11 | 9 |
trunk paraxial mesoderm | 1.41e-11 | 9 |
musculature of body | 1.74e-10 | 10 |
dense mesenchyme tissue | 1.36e-09 | 11 |
paraxial mesoderm | 1.36e-09 | 11 |
presumptive paraxial mesoderm | 1.36e-09 | 11 |
compound organ | 2.42e-09 | 43 |