FFCP PHASE1:Mm9::chr12:110874605..110874642,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=719|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr12:110874605..110874642,+|id=chr12:110874605..110874642,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000468!2.00e-09!333;UBERON:0002346!5.84e-09!71;UBERON:0003075!5.84e-09!71;UBERON:0007284!5.84e-09!71;UBERON:0002021!7.45e-08!10;UBERON:0000411!7.45e-08!10;UBERON:0001950!7.45e-08!10;UBERON:0003056!1.85e-07!49;UBERON:0001049!4.07e-07!52;UBERON:0005068!4.07e-07!52;UBERON:0006241!4.07e-07!52;UBERON:0007135!4.07e-07!52;UBERON:0000955!4.13e-07!50;UBERON:0006238!4.13e-07!50;UBERON:0002616!6.37e-07!49|ontology_enrichment_uberon_v019_2=UBERON:0002021,5.28e-09,10;UBERON:0000411,5.28e-09,10;UBERON:0001950,5.28e-09,10;UBERON:0000073,7.72e-08,54;UBERON:0003056,1.03e-07,49;UBERON:0001049,2.28e-07,52;UBERON:0005068,2.28e-07,52;UBERON:0006241,2.28e-07,52;UBERON:0007135,2.28e-07,52;UBERON:0002346,2.74e-07,64;UBERON:0003075,2.74e-07,64;UBERON:0007284,2.74e-07,64;UBERON:0000955,4.71e-07,47;UBERON:0006238,4.71e-07,47;UBERON:0003080,7.65e-07,40;UBERON:0002616,7.71e-07,46|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257259436035947,0,0,0.202316460859598,0.528990979272033,0,0,0,0,0,0,0,0,0.207379224616955,0.135005938331691,0,0.285650984403804,0.441737081903227,0.122490799214954,0.0958454710182364,0,1.10115880999389,3.70293280447044,4.76180253094355,1.05509030184155,0.0914876436024097,3.12548022334056,0.279182999001381,1.68828783009504,6.41752640662602,5.59794312399969,4.41352210477219,1.67759501242771,0,0.0755715601067855,0,0,0,0,0,0,0,0,0.259786004602869,0,0.14084341977668,0,0,0,0,0,0,0,0,1.33597925158342,1.21439728736295,4.56698217468212,0.691846491768175,3.3158980921577,5.76184664964954,0.251333182659351,3.21353458054686,0.144599356919912,0,11.3236794963186,2.87093973998512,0.969750506270444,0,4.09893115816166,1.8850203613211,0,0,0,0,5.24267237916879,3.20250421973039,2.89005009859588,2.60736480288415,4.60287823194595,3.53239675751252,5.84068547043927,5.39748628406676,0,0,1.26265113531884,1.95180664444056,0,0.900310649026746,3.91832526372859,4.08218994907967,2.94661556655154,1.12442069471675,4.13925393182425,0,2.83659120251729,2.46331573829528,2.84954452155847,11.6779844674751,3.83077383174383,3.49829631893504,1.19420560091096,0,0,0,0.828503090142008,3.28336483973535,1.62055855314913,0.473489471170421,1.77087808572663,3.5481435964097,3.72054311600653,0,0.934122738937356,0.987359099480883,1.97000956894914,0.243206428637567,0.292399974850665,0.439100230582101,0,1.26173969138476,2.36680608472354,0,0,6.39864751605702,8.36052018697579,1.80414445850931,2.8235693447268,1.55664630691409,0.570676878337677,0,0.329397909448022,0.754005626400808,0.397912944082302,0.19496408711912,0,0.216138049874694,0.199141273254367,0,1.71372768914593,1.1270773567308,1.01825663922657,1.16371492300575,0.420814919341911,0.126473074248515,0,0,0,0,2.50267658574141,1.76903095601883,6.97072548393047,0.405720242777006,1.4470629585145,1.01850340712568,0.575392274901621,0.810676133875177,2.47105271869273,24.4405951096503,0.744281895337007,1.5601883655728,0,0,0,0.184753190166605,0.189491411770485,1.79261474086228,3.56464680127895,5.63256595892405,3.1826188913945,3.09456733151818,2.53673742215138,1.10344600874334,1.32878813789265,0.478364305972461,0.327726629431476,0.172684981865896,0,0,0,0,0.551873492609465,1.76605648986571,1.52375192569864,0,0.252470927204373,0.631016438832513,0.390438744296638,0.646270193198397,0.238968797952552,0.668396022247182,0.283076530788832,0,0.292255857911312,0.790575555893047,2.57057053137446,0,0.534196811001766,3.09485222771795,0,0,4.85561272309963,2.11626489875326,5.28094223316515,0.590603785761546,1.53717573971964,1.03371317267288,1.81766864738753,3.20847640546249,0.316036757935816,0,2.06271086496374,4.42571487479924,2.88097750450096,0.388076051348264,1.71469628025274,1.59606210278046,4.63758925765383,4.93647061806363,1.2178597964584,0.938686832254841,1.0591603543191,0,0.16488625294148,4.68246837418126,1.26657142349127,0.835606408021955,0.820704498725306,0.582961673259701,3.52308073819968,0,0.412773735926445,0.370389054739423,0,0,0,0,0,0,0,1.10717597753397,2.84647253977588,3.34816556547584,6.89991376847747,3.05707589244649,2.56242258131159,1.32245529160537,0,0.129614973291793,0,0,0.897099276263873,0.330916980914195,1.75006069509643,1.6790777052105,6.58928889414035,3.0512882047896,1.95306577265925,0.734015410979976,0.724752362478018,0,0,1.01362607645082,1.43795340030758,0.389762468933385,0.537080087002444,0.39736270956253,0.120195449519969,0.147689527174577,0.100966449948148,0,0.201652370273681,0.0974578807397524,0.0962118416403295,0,0,1.33191572024439,0,0,0.386379188064381,0.375364950902364,0,0,0,29.3670958160875,17.9526842237799,27.498984645091,8.93636548187176,4.11049511862385,12.0863023582352,8.10027000278167,9.00642406448441,6.79713613476307,13.9795284172991,0.62272408550506,2.79317411380722,1.70733605754134,9.48116196566347,1.04806581313991,0.183843508450014,2.889207461421,5.97501665992793,3.85103051510178,5.05394423527595,5.32306529769503,5.84741658296836,4.49479235855436,3.26528277264833,3.21638626151434,2.85776214769844,3.59241410429052,3.27945674788299,4.53294490883637,6.03515572551029,12.343293085875,8.69631450180754,7.15308569841963,5.0871245821315,4.14081273827455,4.56918882615053,7.86590283352922,12.8904158604543,6.24698923690964,16.8342681497322,4.98267076121531,5.51625101303155,9.82154503607254,3.09873682371932,1.92906610981141,2.99772693525535,3.04111090979031,3.22306581072447,8.7992632751668,1.76473135295612,2.55054619182464|short_description=p@chr12:110874605..110874642,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=719 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr12:110874605..110874642,+ | |||
|description=CAGE_peak_at_chr12:110874605..110874642,+ | |||
|id=chr12:110874605..110874642,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!2.00e-09!333;UBERON:0002346!5.84e-09!71;UBERON:0003075!5.84e-09!71;UBERON:0007284!5.84e-09!71;UBERON:0002021!7.45e-08!10;UBERON:0000411!7.45e-08!10;UBERON:0001950!7.45e-08!10;UBERON:0003056!1.85e-07!49;UBERON:0001049!4.07e-07!52;UBERON:0005068!4.07e-07!52;UBERON:0006241!4.07e-07!52;UBERON:0007135!4.07e-07!52;UBERON:0000955!4.13e-07!50;UBERON:0006238!4.13e-07!50;UBERON:0002616!6.37e-07!49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,5.28e-09,10;UBERON:0000411,5.28e-09,10;UBERON:0001950,5.28e-09,10;UBERON:0000073,7.72e-08,54;UBERON:0003056,1.03e-07,49;UBERON:0001049,2.28e-07,52;UBERON:0005068,2.28e-07,52;UBERON:0006241,2.28e-07,52;UBERON:0007135,2.28e-07,52;UBERON:0002346,2.74e-07,64;UBERON:0003075,2.74e-07,64;UBERON:0007284,2.74e-07,64;UBERON:0000955,4.71e-07,47;UBERON:0006238,4.71e-07,47;UBERON:0003080,7.65e-07,40;UBERON:0002616,7.71e-07,46 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257259436035947,0,0,0.202316460859598,0.528990979272033,0,0,0,0,0,0,0,0,0.207379224616955,0.135005938331691,0,0.285650984403804,0.441737081903227,0.122490799214954,0.0958454710182364,0,1.10115880999389,3.70293280447044,4.76180253094355,1.05509030184155,0.0914876436024097,3.12548022334056,0.279182999001381,1.68828783009504,6.41752640662602,5.59794312399969,4.41352210477219,1.67759501242771,0,0.0755715601067855,0,0,0,0,0,0,0,0,0.259786004602869,0,0.14084341977668,0,0,0,0,0,0,0,0,1.33597925158342,1.21439728736295,4.56698217468212,0.691846491768175,3.3158980921577,5.76184664964954,0.251333182659351,3.21353458054686,0.144599356919912,0,11.3236794963186,2.87093973998512,0.969750506270444,0,4.09893115816166,1.8850203613211,0,0,0,0,5.24267237916879,3.20250421973039,2.89005009859588,2.60736480288415,4.60287823194595,3.53239675751252,5.84068547043927,5.39748628406676,0,0,1.26265113531884,1.95180664444056,0,0.900310649026746,3.91832526372859,4.08218994907967,2.94661556655154,1.12442069471675,4.13925393182425,0,2.83659120251729,2.46331573829528,2.84954452155847,11.6779844674751,3.83077383174383,3.49829631893504,1.19420560091096,0,0,0,0.828503090142008,3.28336483973535,1.62055855314913,0.473489471170421,1.77087808572663,3.5481435964097,3.72054311600653,0,0.934122738937356,0.987359099480883,1.97000956894914,0.243206428637567,0.292399974850665,0.439100230582101,0,1.26173969138476,2.36680608472354,0,0,6.39864751605702,8.36052018697579,1.80414445850931,2.8235693447268,1.55664630691409,0.570676878337677,0,0.329397909448022,0.754005626400808,0.397912944082302,0.19496408711912,0,0.216138049874694,0.199141273254367,0,1.71372768914593,1.1270773567308,1.01825663922657,1.16371492300575,0.420814919341911,0.126473074248515,0,0,0,0,2.50267658574141,1.76903095601883,6.97072548393047,0.405720242777006,1.4470629585145,1.01850340712568,0.575392274901621,0.810676133875177,2.47105271869273,24.4405951096503,0.744281895337007,1.5601883655728,0,0,0,0.184753190166605,0.189491411770485,1.79261474086228,3.56464680127895,5.63256595892405,3.1826188913945,3.09456733151818,2.53673742215138,1.10344600874334,1.32878813789265,0.478364305972461,0.327726629431476,0.172684981865896,0,0,0,0,0.551873492609465,1.76605648986571,1.52375192569864,0,0.252470927204373,0.631016438832513,0.390438744296638,0.646270193198397,0.238968797952552,0.668396022247182,0.283076530788832,0,0.292255857911312,0.790575555893047,2.57057053137446,0,0.534196811001766,3.09485222771795,0,0,4.85561272309963,2.11626489875326,5.28094223316515,0.590603785761546,1.53717573971964,1.03371317267288,1.81766864738753,3.20847640546249,0.316036757935816,0,2.06271086496374,4.42571487479924,2.88097750450096,0.388076051348264,1.71469628025274,1.59606210278046,4.63758925765383,4.93647061806363,1.2178597964584,0.938686832254841,1.0591603543191,0,0.16488625294148,4.68246837418126,1.26657142349127,0.835606408021955,0.820704498725306,0.582961673259701,3.52308073819968,0,0.412773735926445,0.370389054739423,0,0,0,0,0,0,0,1.10717597753397,2.84647253977588,3.34816556547584,6.89991376847747,3.05707589244649,2.56242258131159,1.32245529160537,0,0.129614973291793,0,0,0.897099276263873,0.330916980914195,1.75006069509643,1.6790777052105,6.58928889414035,3.0512882047896,1.95306577265925,0.734015410979976,0.724752362478018,0,0,1.01362607645082,1.43795340030758,0.389762468933385,0.537080087002444,0.39736270956253,0.120195449519969,0.147689527174577,0.100966449948148,0,0.201652370273681,0.0974578807397524,0.0962118416403295,0,0,1.33191572024439,0,0,0.386379188064381,0.375364950902364,0,0,0,29.3670958160875,17.9526842237799,27.498984645091,8.93636548187176,4.11049511862385,12.0863023582352,8.10027000278167,9.00642406448441,6.79713613476307,13.9795284172991,0.62272408550506,2.79317411380722,1.70733605754134,9.48116196566347,1.04806581313991,0.183843508450014,2.889207461421,5.97501665992793,3.85103051510178,5.05394423527595,5.32306529769503,5.84741658296836,4.49479235855436,3.26528277264833,3.21638626151434,2.85776214769844,3.59241410429052,3.27945674788299,4.53294490883637,6.03515572551029,12.343293085875,8.69631450180754,7.15308569841963,5.0871245821315,4.14081273827455,4.56918882615053,7.86590283352922,12.8904158604543,6.24698923690964,16.8342681497322,4.98267076121531,5.51625101303155,9.82154503607254,3.09873682371932,1.92906610981141,2.99772693525535,3.04111090979031,3.22306581072447,8.7992632751668,1.76473135295612,2.55054619182464 | |||
|short_description=p@chr12:110874605..110874642,+ | |||
}} |
Latest revision as of 17:28, 4 August 2015
Short description: | p@chr12:110874605..110874642, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:110874605..110874642, + |
Coexpression cluster: | MCL_coexpression_mm9:719 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
occipital lobe | 5.28e-09 | 10 |
visual cortex | 5.28e-09 | 10 |
neocortex | 5.28e-09 | 10 |
regional part of nervous system | 7.72e-08 | 54 |
pre-chordal neural plate | 1.03e-07 | 49 |
neural tube | 2.28e-07 | 52 |
neural rod | 2.28e-07 | 52 |
future spinal cord | 2.28e-07 | 52 |
neural keel | 2.28e-07 | 52 |
neurectoderm | 2.74e-07 | 64 |
neural plate | 2.74e-07 | 64 |
presumptive neural plate | 2.74e-07 | 64 |
brain | 4.71e-07 | 47 |
future brain | 4.71e-07 | 47 |
anterior neural tube | 7.65e-07 | 40 |
regional part of brain | 7.71e-07 | 46 |