FFCP PHASE1:Mm9::chr5:92707243..92707248,-: Difference between revisions
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{{FFCP|EntrezGene=67111|HGNC=|UniProt=G3XA18,Q3V023,Q9D7V9|association_with_transcript=-36bp_to_NM_001163687,NM_025972,uc008ycq.2,uc008ycr.2,uc008ycs.1_5end|description=CAGE_peak_7_at_Naaa_5end|id=chr5:92707243..92707248,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000128,2.71e-24,6;CL:0000126,2.71e-24,6;CL:0000127,2.71e-24,6;CL:0002453,4.25e-18,8;CL:0000333,2.25e-14,10;CL:0000095,2.25e-14,10;CL:0000243,2.25e-14,10;CL:0000123,2.25e-14,10;CL:0000125,2.25e-14,10;CL:0000030,2.25e-14,10;CL:0000339,2.25e-14,10;CL:0002605,1.37e-09,2;CL:0002604,1.37e-09,2;CL:0002603,7.21e-09,2;CL:0000708,9.43e-09,2;CL:0000219,4.70e-07,54|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0002619,7.38e-11,17;UBERON:0002021,1.07e-09,10;UBERON:0000411,1.07e-09,10;UBERON:0001950,1.07e-09,10;UBERON:0003210,9.43e-09,2;UBERON:0000956,1.26e-08,21;UBERON:0001869,1.26e-08,21;UBERON:0000203,1.26e-08,21;UBERON:0001049,2.28e-07,52;UBERON:0005068,2.28e-07,52;UBERON:0006241,2.28e-07,52;UBERON:0007135,2.28e-07,52;UBERON:0002616,4.78e-07,46;UBERON:0001017,6.55e-07,73;UBERON:0000955,7.31e-07,47;UBERON:0006238,7.31e-07,47|phase1_expression=0.480446541314382,0.348975407639361,0.454999239389536,0.30246421130683,0.500895729946347,0,0,0,0,0,0,0,0,0.0874204024189974,0,0,0.699561878128147,0.630924330716475,0.548457734422955,0,0.340173160604279,0,0,0.799962113967033,1.14704640533585,0,0.430761996159075,0.430942465371778,0.190023419456374,0,0.443461021310609,0,0.61506478758457,0,0.577703239502549,0.166234645358492,0.204169356262369,0,0.7813353445238,1.0470474879476,0.588231488031014,0.683045484958446,0.485510353031154,0,0.506884656097573,0.183546752161682,1.56478268869608,1.30815093828268,3.07560655828261,3.69416808241138,2.09979632438044,1.43752564364972,0.167782606057736,0,0,0,0,0,0.404632921719196,0,0,1.0165335962074,3.55717918444456,1.3498495759221,0,0.7104801149461,0.299600110518405,0.768436610643109,0,0,0.210324961351382,0.571301968807607,0.441737081903227,0,0,0,0,0,0.153606533256243,0,0.365950574409639,0.52091337055676,0.837548997004143,0,0.15279824777681,0.294628585473668,0.427115042397309,0.372798891650601,0,0,0.289864488701678,0.860423876981386,0,0,0,0,0,0.681721290312231,1.03914401841148,1.41335829804136,0.14084341977668,2.56652954828636,0,0,0,0,0,0,0.517875767294343,0.29688427812965,0,0,0.922461989024234,0.301445281105245,0.117588707135705,0.125666591329675,0,0.433798070759735,0,0,0,0,0,0.585561594023094,0.41889341362691,0.255457055208591,0,0.599902730993408,0,0.299581278809645,0,0,0.173824320192276,0.511430914660661,0.83115217823824,0.324482526135515,0.203678727700633,0.124406970610093,0,0.420883711772948,0.130120442962704,0,0,0.60281927134286,0.136072998302656,0.512454881139399,0.374806898238915,0.776110112217047,0,0,0.175951124163949,0.43839146485515,0.278047249225598,0,0,0,0,0,0,0,0.234526059981096,0,0.23674473558521,0.393528463494808,0,0.232533944750408,0.804820204198858,0.233530684734339,0.329119699826961,0,0.162137619091711,0,0,0.536825675041487,0.420579897128254,0.308713837137853,0.330418782983798,0.264450566663544,0,0.232236671860439,0,0,0.22237804384487,0.380451252225118,0,0.164698954724011,0.502670417600539,0.198956472041151,0.779856348476481,0.898819408654221,0.216138049874694,0.199141273254367,0.189667900953082,0,0,0,0.193952487167626,0.0701358198903186,0.189709611372772,0.147610147979602,0.156998727841375,0,0,0,0,0,0,0.241177159752417,0.763877555344259,0.287696137450811,0,0,0,0.372140947668503,0,0.252578877947112,0.358794827043824,0.482443521363367,0.184753190166605,0,0.162964976442026,0.169745085775188,0,0.167506257441816,0.238043640886014,0,0,0.221464689648775,0.637819074629948,0.491589944147214,0.345369963731791,0.289298117163023,0,0.54390568381871,0.491764273019036,0.275936746304732,0.80275294993896,0.234423373184406,0.163934945376675,0,0.315508219416257,0,0,0,0,0,0,0,0,0,0.425820255624806,0.534196811001766,0,0,0,0.242780636154981,0.302323556964751,0,0,0.307435147943927,0.516856586336442,0.363533729477506,0.356497378384721,0,0,0,0.340439605753788,0.18006109403131,0.129358683782755,0,0,0.356737635204141,0.493647061806363,1.2178597964584,0,1.48282449604674,0,0,0.484393280087717,0.603129249281559,0.238744688006273,0.328281799490123,0.291480836629851,1.29797711407357,0.170870880797853,0,0.185194527369712,0.188368457004691,0,0,0,0,0,0,0.158167996790568,0.203319467126849,0.216010681643603,0.209088296014469,0,0.269728692769641,0.330613822901344,0,0.518459893167171,0.621339313086926,0,0.149516546043979,0.165458490457098,0.388902376688095,0.258319646955462,0,0.704143431874524,0.5208175393758,0.104859344425711,0.241584120826006,0,0.316011120628178,0,0,0.129920822977795,0,0,0,0,0,0.0762068066549998,0,0,0.0962118416403295,0,0.226730383615211,0.443971906748129,0,0.335769232728157,0.579568782096571,0.187682475451182,0.183151624267265,0.428736758158132,0.501572104035363,0,0.460325236507177,1.14579102687879,0.515559547031063,0,1.5107877947794,1.35004500046361,1.35096360967266,1.81256963593682,0.51776031175182,0,0.399024873401031,0,0,0.419226325255965,0,0.666740183404846,0.206035057238894,0.320919209591815,0.252697211763798,0,0.188626341386076,0.0936415074698824,0.128050304809739,0.17230640686684,0.476293691283074,0.231768651889711,0.38581844092741,0,0.441596760403192,0,0.177475806159338,0.238436189947321,0.145346416632329,0.376437521661322,0.423073039458382,0.365855945745545,0.263069711437843,0.271608227691724,1.12228454331548,0.474540072496697,0.197008964751127,0,0,0.192906610981141,0.249810577937946,0.467863216890817,0.429742108096597,0.191288332068843,0.441182838239031,0.695603506861264|short_description=p7@Naaa}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:67111 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:G3XA18,uniprot:Q3V023,uniprot:Q9D7V9 | |||
|association_with_transcript=-36bp_to_NM_001163687,NM_025972,uc008ycq.2,uc008ycr.2,uc008ycs.1_5end | |||
|cluster_id=chr5:92707243..92707248,- | |||
|description=CAGE_peak_7_at_Naaa_5end | |||
|id=chr5:92707243..92707248,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000128,2.71e-24,6;CL:0000126,2.71e-24,6;CL:0000127,2.71e-24,6;CL:0002453,4.25e-18,8;CL:0000333,2.25e-14,10;CL:0000095,2.25e-14,10;CL:0000243,2.25e-14,10;CL:0000123,2.25e-14,10;CL:0000125,2.25e-14,10;CL:0000030,2.25e-14,10;CL:0000339,2.25e-14,10;CL:0002605,1.37e-09,2;CL:0002604,1.37e-09,2;CL:0002603,7.21e-09,2;CL:0000708,9.43e-09,2;CL:0000219,4.70e-07,54 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,7.38e-11,17;UBERON:0002021,1.07e-09,10;UBERON:0000411,1.07e-09,10;UBERON:0001950,1.07e-09,10;UBERON:0003210,9.43e-09,2;UBERON:0000956,1.26e-08,21;UBERON:0001869,1.26e-08,21;UBERON:0000203,1.26e-08,21;UBERON:0001049,2.28e-07,52;UBERON:0005068,2.28e-07,52;UBERON:0006241,2.28e-07,52;UBERON:0007135,2.28e-07,52;UBERON:0002616,4.78e-07,46;UBERON:0001017,6.55e-07,73;UBERON:0000955,7.31e-07,47;UBERON:0006238,7.31e-07,47 | |||
|phase1_expression=0.480446541314382,0.348975407639361,0.454999239389536,0.30246421130683,0.500895729946347,0,0,0,0,0,0,0,0,0.0874204024189974,0,0,0.699561878128147,0.630924330716475,0.548457734422955,0,0.340173160604279,0,0,0.799962113967033,1.14704640533585,0,0.430761996159075,0.430942465371778,0.190023419456374,0,0.443461021310609,0,0.61506478758457,0,0.577703239502549,0.166234645358492,0.204169356262369,0,0.7813353445238,1.0470474879476,0.588231488031014,0.683045484958446,0.485510353031154,0,0.506884656097573,0.183546752161682,1.56478268869608,1.30815093828268,3.07560655828261,3.69416808241138,2.09979632438044,1.43752564364972,0.167782606057736,0,0,0,0,0,0.404632921719196,0,0,1.0165335962074,3.55717918444456,1.3498495759221,0,0.7104801149461,0.299600110518405,0.768436610643109,0,0,0.210324961351382,0.571301968807607,0.441737081903227,0,0,0,0,0,0.153606533256243,0,0.365950574409639,0.52091337055676,0.837548997004143,0,0.15279824777681,0.294628585473668,0.427115042397309,0.372798891650601,0,0,0.289864488701678,0.860423876981386,0,0,0,0,0,0.681721290312231,1.03914401841148,1.41335829804136,0.14084341977668,2.56652954828636,0,0,0,0,0,0,0.517875767294343,0.29688427812965,0,0,0.922461989024234,0.301445281105245,0.117588707135705,0.125666591329675,0,0.433798070759735,0,0,0,0,0,0.585561594023094,0.41889341362691,0.255457055208591,0,0.599902730993408,0,0.299581278809645,0,0,0.173824320192276,0.511430914660661,0.83115217823824,0.324482526135515,0.203678727700633,0.124406970610093,0,0.420883711772948,0.130120442962704,0,0,0.60281927134286,0.136072998302656,0.512454881139399,0.374806898238915,0.776110112217047,0,0,0.175951124163949,0.43839146485515,0.278047249225598,0,0,0,0,0,0,0,0.234526059981096,0,0.23674473558521,0.393528463494808,0,0.232533944750408,0.804820204198858,0.233530684734339,0.329119699826961,0,0.162137619091711,0,0,0.536825675041487,0.420579897128254,0.308713837137853,0.330418782983798,0.264450566663544,0,0.232236671860439,0,0,0.22237804384487,0.380451252225118,0,0.164698954724011,0.502670417600539,0.198956472041151,0.779856348476481,0.898819408654221,0.216138049874694,0.199141273254367,0.189667900953082,0,0,0,0.193952487167626,0.0701358198903186,0.189709611372772,0.147610147979602,0.156998727841375,0,0,0,0,0,0,0.241177159752417,0.763877555344259,0.287696137450811,0,0,0,0.372140947668503,0,0.252578877947112,0.358794827043824,0.482443521363367,0.184753190166605,0,0.162964976442026,0.169745085775188,0,0.167506257441816,0.238043640886014,0,0,0.221464689648775,0.637819074629948,0.491589944147214,0.345369963731791,0.289298117163023,0,0.54390568381871,0.491764273019036,0.275936746304732,0.80275294993896,0.234423373184406,0.163934945376675,0,0.315508219416257,0,0,0,0,0,0,0,0,0,0.425820255624806,0.534196811001766,0,0,0,0.242780636154981,0.302323556964751,0,0,0.307435147943927,0.516856586336442,0.363533729477506,0.356497378384721,0,0,0,0.340439605753788,0.18006109403131,0.129358683782755,0,0,0.356737635204141,0.493647061806363,1.2178597964584,0,1.48282449604674,0,0,0.484393280087717,0.603129249281559,0.238744688006273,0.328281799490123,0.291480836629851,1.29797711407357,0.170870880797853,0,0.185194527369712,0.188368457004691,0,0,0,0,0,0,0.158167996790568,0.203319467126849,0.216010681643603,0.209088296014469,0,0.269728692769641,0.330613822901344,0,0.518459893167171,0.621339313086926,0,0.149516546043979,0.165458490457098,0.388902376688095,0.258319646955462,0,0.704143431874524,0.5208175393758,0.104859344425711,0.241584120826006,0,0.316011120628178,0,0,0.129920822977795,0,0,0,0,0,0.0762068066549998,0,0,0.0962118416403295,0,0.226730383615211,0.443971906748129,0,0.335769232728157,0.579568782096571,0.187682475451182,0.183151624267265,0.428736758158132,0.501572104035363,0,0.460325236507177,1.14579102687879,0.515559547031063,0,1.5107877947794,1.35004500046361,1.35096360967266,1.81256963593682,0.51776031175182,0,0.399024873401031,0,0,0.419226325255965,0,0.666740183404846,0.206035057238894,0.320919209591815,0.252697211763798,0,0.188626341386076,0.0936415074698824,0.128050304809739,0.17230640686684,0.476293691283074,0.231768651889711,0.38581844092741,0,0.441596760403192,0,0.177475806159338,0.238436189947321,0.145346416632329,0.376437521661322,0.423073039458382,0.365855945745545,0.263069711437843,0.271608227691724,1.12228454331548,0.474540072496697,0.197008964751127,0,0,0.192906610981141,0.249810577937946,0.467863216890817,0.429742108096597,0.191288332068843,0.441182838239031,0.695603506861264 | |||
|short_description=p7@Naaa | |||
}} |
Revision as of 19:16, 4 August 2015
Short description: | p7@Naaa |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Naaa_5end |
Coexpression cluster: | NA |
Association with transcript: | -36bp_to_NM_001163687, NM_025972, uc008ycq.2, uc008ycr.2, uc008ycs.1_5end |
EntrezGene: | 67111 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte | 2.71e-24 | 6 |
macroglial cell | 2.71e-24 | 6 |
astrocyte | 2.71e-24 | 6 |
oligodendrocyte precursor cell | 4.25e-18 | 8 |
migratory neural crest cell | 2.25e-14 | 10 |
neuron associated cell | 2.25e-14 | 10 |
glial cell (sensu Vertebrata) | 2.25e-14 | 10 |
neuron associated cell (sensu Vertebrata) | 2.25e-14 | 10 |
glial cell | 2.25e-14 | 10 |
glioblast | 2.25e-14 | 10 |
glioblast (sensu Vertebrata) | 2.25e-14 | 10 |
astrocyte of the cerebral cortex | 1.37e-09 | 2 |
astrocyte of the hippocampus | 1.37e-09 | 2 |
astrocyte of the cerebellum | 7.21e-09 | 2 |
leptomeningeal cell | 9.43e-09 | 2 |
motile cell | 4.70e-07 | 54 |
Ontology term | p-value | n |
---|---|---|
regional part of cerebral cortex | 7.38e-11 | 17 |
occipital lobe | 1.07e-09 | 10 |
visual cortex | 1.07e-09 | 10 |
neocortex | 1.07e-09 | 10 |
blood-cerebrospinal fluid barrier | 9.43e-09 | 2 |
cerebral cortex | 1.26e-08 | 21 |
cerebral hemisphere | 1.26e-08 | 21 |
pallium | 1.26e-08 | 21 |
neural tube | 2.28e-07 | 52 |
neural rod | 2.28e-07 | 52 |
future spinal cord | 2.28e-07 | 52 |
neural keel | 2.28e-07 | 52 |
regional part of brain | 4.78e-07 | 46 |
central nervous system | 6.55e-07 | 73 |
brain | 7.31e-07 | 47 |
future brain | 7.31e-07 | 47 |