FFCP PHASE1:Mm9::chr10:85810558..85810570,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=323|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr10:85810558..85810570,+|id=chr10:85810558..85810570,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002605,1.06e-18,2;CL:0002604,1.06e-18,2;CL:0000680,4.99e-14,6;CL:0000187,4.99e-14,6;CL:0000056,4.99e-14,6;CL:0000192,3.66e-13,3;CL:0000359,3.66e-13,3;CL:0002539,3.66e-13,3;CL:0000514,3.66e-13,3;CL:0000222,4.06e-12,7;CL:0000355,1.46e-09,9;CL:0000128,7.48e-07,6;CL:0000126,7.48e-07,6;CL:0000127,7.48e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0001135,3.66e-13,3;UBERON:0004237,3.66e-13,3;UBERON:0004695,3.66e-13,3;UBERON:0002111,3.66e-13,3;UBERON:0004178,3.66e-13,3;UBERON:0000947,4.16e-10,4;UBERON:0001637,4.16e-10,4;UBERON:0004573,4.16e-10,4;UBERON:0003509,4.16e-10,4;UBERON:0004571,4.16e-10,4;UBERON:0010191,4.16e-10,4;UBERON:0004572,4.16e-10,4;UBERON:0001134,1.46e-09,9;UBERON:0002036,1.46e-09,9;UBERON:0002385,1.46e-09,9;UBERON:0000486,1.46e-09,9;UBERON:0007503,1.46e-09,9;UBERON:0001015,1.46e-09,9;UBERON:0002329,1.46e-09,9;UBERON:0003082,1.46e-09,9;UBERON:0003059,1.46e-09,9;UBERON:0007282,1.46e-09,9;UBERON:0004290,1.46e-09,9;UBERON:0009618,1.46e-09,9;UBERON:0000383,1.16e-08,10;UBERON:0000055,2.90e-08,5;UBERON:0007500,2.90e-08,5;UBERON:0001981,2.90e-08,5;UBERON:0002049,2.90e-08,5;UBERON:0007798,2.90e-08,5;UBERON:0004537,2.90e-08,5;UBERON:0006965,2.90e-08,5;UBERON:0007524,6.32e-08,11;UBERON:0003077,6.32e-08,11;UBERON:0007285,6.32e-08,11|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.39921408534059,3.24406179902447,0.367093504323363,0,0.65407546914134,2.85592037554813,1.1665793944457,0.139986421625363,0,0,0,0,0,0,1.03134418455488,0,0,0,1.0165335962074,0,0,0,0,0.599200221036809,0,0.103689612308478,0,0,0,0,0,0,0,0,0.127687338085188,0.153606533256243,0,0,0.52091337055676,0.279182999001381,0,0.15279824777681,0.294628585473668,0,0,0.908714319998209,0.0755715601067855,0.579728977403356,0.860423876981386,0,0,0,0,0.140444420131752,0.170430322578058,0.259786004602869,0.35333957451034,0,0,0,0,0,0,0,0.11418387971906,0,0.593768556259299,0,0.608930956624282,0,0.452167921657868,0.470354828542819,0.628332956648377,0.494389935468748,0.433798070759735,0,0,0,0,0,0.292780797011547,0,0,0,0,0,0.149790639404823,0,0.125654352112864,0,0.255715457330331,0.20778804455956,0.324482526135515,0.203678727700633,0.124406970610093,0,0.631325567659422,0,0,0,0,0,0,0,0.776110112217047,0,0.189106080167819,0,0,0,0.348252166522167,0,0,0,0,0,0.207125772535502,0,0.36012412292203,0.23674473558521,0.196764231747404,0,0.465067889500816,0.268273401399619,0.116765342367169,0.329119699826961,0,0.324275238183423,0,0.439100230582101,0.134206418760372,0.210289948564127,0.205809224758569,0,0,0,0,0.257734922644187,0,0.22237804384487,0,0,0,0,0,0.19496408711912,0,0,0.199141273254367,0,0,0,0.203651327845314,0,0.140271639780637,0.316182685621286,0.885660887877613,1.255989822731,0.370191491765402,0,0,0.196558995113203,0,0,0,0,0,0,0,1.43768206527355,0,0.312037673114561,0,0,0,0.554259570499814,0,0,0.339490171550376,0,0.167506257441816,0.238043640886014,0.585400943573396,0.157635144106191,0,0.478364305972461,1.14704320301017,1.03610989119537,0.867894351489069,0,0,0,0.275936746304732,0,0.117211686592203,0.655739781506702,0.252470927204373,0,0,0,0,0.668396022247182,0,0,0,0,0,0.141940085208269,0.178065603667255,0.162886959353576,0.329940245945071,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0,0.608929898229199,0,0,0,0,0,0,0.119372344003136,0.164140899745061,0,0,0,0,0,0.376736914009382,0.136694227721025,0,0,0,0,0,0,0,0.108005340821801,0,0,0.134864346384821,0,0.26175594198403,0.129614973291793,0.621339313086926,0,0,0,0,0,0.168956125490778,0.352071715937262,0.13020438484395,0.209718688851422,0.241584120826006,0,0,0.202725215290164,0.102710957164827,0,0,0.198681354781265,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0.187682475451182,0,0,0,0,0,0,0,0,0.755393897389701,0,0,0.453142408984205,0,0,0,0,0,0,0,0,0,0,0.252697211763798,0,0.188626341386076,0,0,0.17230640686684,0,0.115884325944855,0,0,0.147198920134397,0,0,0,0.290692833264657,0.188218760830661,0.169229215783353,0,0,0.271608227691724,0,0,0.0985044823755635,0,0,0,0,0.233931608445408,0.214871054048298,0.382576664137687,0,0.231867835620421|short_description=p@chr10:85810558..85810570,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=323 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr10:85810558..85810570,+ | |||
|description=CAGE_peak_at_chr10:85810558..85810570,+ | |||
|id=chr10:85810558..85810570,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002605,1.06e-18,2;CL:0002604,1.06e-18,2;CL:0000680,4.99e-14,6;CL:0000187,4.99e-14,6;CL:0000056,4.99e-14,6;CL:0000192,3.66e-13,3;CL:0000359,3.66e-13,3;CL:0002539,3.66e-13,3;CL:0000514,3.66e-13,3;CL:0000222,4.06e-12,7;CL:0000355,1.46e-09,9;CL:0000128,7.48e-07,6;CL:0000126,7.48e-07,6;CL:0000127,7.48e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001135,3.66e-13,3;UBERON:0004237,3.66e-13,3;UBERON:0004695,3.66e-13,3;UBERON:0002111,3.66e-13,3;UBERON:0004178,3.66e-13,3;UBERON:0000947,4.16e-10,4;UBERON:0001637,4.16e-10,4;UBERON:0004573,4.16e-10,4;UBERON:0003509,4.16e-10,4;UBERON:0004571,4.16e-10,4;UBERON:0010191,4.16e-10,4;UBERON:0004572,4.16e-10,4;UBERON:0001134,1.46e-09,9;UBERON:0002036,1.46e-09,9;UBERON:0002385,1.46e-09,9;UBERON:0000486,1.46e-09,9;UBERON:0007503,1.46e-09,9;UBERON:0001015,1.46e-09,9;UBERON:0002329,1.46e-09,9;UBERON:0003082,1.46e-09,9;UBERON:0003059,1.46e-09,9;UBERON:0007282,1.46e-09,9;UBERON:0004290,1.46e-09,9;UBERON:0009618,1.46e-09,9;UBERON:0000383,1.16e-08,10;UBERON:0000055,2.90e-08,5;UBERON:0007500,2.90e-08,5;UBERON:0001981,2.90e-08,5;UBERON:0002049,2.90e-08,5;UBERON:0007798,2.90e-08,5;UBERON:0004537,2.90e-08,5;UBERON:0006965,2.90e-08,5;UBERON:0007524,6.32e-08,11;UBERON:0003077,6.32e-08,11;UBERON:0007285,6.32e-08,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.39921408534059,3.24406179902447,0.367093504323363,0,0.65407546914134,2.85592037554813,1.1665793944457,0.139986421625363,0,0,0,0,0,0,1.03134418455488,0,0,0,1.0165335962074,0,0,0,0,0.599200221036809,0,0.103689612308478,0,0,0,0,0,0,0,0,0.127687338085188,0.153606533256243,0,0,0.52091337055676,0.279182999001381,0,0.15279824777681,0.294628585473668,0,0,0.908714319998209,0.0755715601067855,0.579728977403356,0.860423876981386,0,0,0,0,0.140444420131752,0.170430322578058,0.259786004602869,0.35333957451034,0,0,0,0,0,0,0,0.11418387971906,0,0.593768556259299,0,0.608930956624282,0,0.452167921657868,0.470354828542819,0.628332956648377,0.494389935468748,0.433798070759735,0,0,0,0,0,0.292780797011547,0,0,0,0,0,0.149790639404823,0,0.125654352112864,0,0.255715457330331,0.20778804455956,0.324482526135515,0.203678727700633,0.124406970610093,0,0.631325567659422,0,0,0,0,0,0,0,0.776110112217047,0,0.189106080167819,0,0,0,0.348252166522167,0,0,0,0,0,0.207125772535502,0,0.36012412292203,0.23674473558521,0.196764231747404,0,0.465067889500816,0.268273401399619,0.116765342367169,0.329119699826961,0,0.324275238183423,0,0.439100230582101,0.134206418760372,0.210289948564127,0.205809224758569,0,0,0,0,0.257734922644187,0,0.22237804384487,0,0,0,0,0,0.19496408711912,0,0,0.199141273254367,0,0,0,0.203651327845314,0,0.140271639780637,0.316182685621286,0.885660887877613,1.255989822731,0.370191491765402,0,0,0.196558995113203,0,0,0,0,0,0,0,1.43768206527355,0,0.312037673114561,0,0,0,0.554259570499814,0,0,0.339490171550376,0,0.167506257441816,0.238043640886014,0.585400943573396,0.157635144106191,0,0.478364305972461,1.14704320301017,1.03610989119537,0.867894351489069,0,0,0,0.275936746304732,0,0.117211686592203,0.655739781506702,0.252470927204373,0,0,0,0,0.668396022247182,0,0,0,0,0,0.141940085208269,0.178065603667255,0.162886959353576,0.329940245945071,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0,0.608929898229199,0,0,0,0,0,0,0.119372344003136,0.164140899745061,0,0,0,0,0,0.376736914009382,0.136694227721025,0,0,0,0,0,0,0,0.108005340821801,0,0,0.134864346384821,0,0.26175594198403,0.129614973291793,0.621339313086926,0,0,0,0,0,0.168956125490778,0.352071715937262,0.13020438484395,0.209718688851422,0.241584120826006,0,0,0.202725215290164,0.102710957164827,0,0,0.198681354781265,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0.187682475451182,0,0,0,0,0,0,0,0,0.755393897389701,0,0,0.453142408984205,0,0,0,0,0,0,0,0,0,0,0.252697211763798,0,0.188626341386076,0,0,0.17230640686684,0,0.115884325944855,0,0,0.147198920134397,0,0,0,0.290692833264657,0.188218760830661,0.169229215783353,0,0,0.271608227691724,0,0,0.0985044823755635,0,0,0,0,0.233931608445408,0.214871054048298,0.382576664137687,0,0.231867835620421 | |||
|short_description=p@chr10:85810558..85810570,+ | |||
}} |
Latest revision as of 23:10, 4 August 2015
Short description: | p@chr10:85810558..85810570, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:85810558..85810570, + |
Coexpression cluster: | MCL_coexpression_mm9:323 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 1.06e-18 | 2 |
astrocyte of the hippocampus | 1.06e-18 | 2 |
muscle precursor cell | 4.99e-14 | 6 |
muscle cell | 4.99e-14 | 6 |
myoblast | 4.99e-14 | 6 |
smooth muscle cell | 3.66e-13 | 3 |
vascular associated smooth muscle cell | 3.66e-13 | 3 |
aortic smooth muscle cell | 3.66e-13 | 3 |
smooth muscle myoblast | 3.66e-13 | 3 |
mesodermal cell | 4.06e-12 | 7 |
multi-potent skeletal muscle stem cell | 1.46e-09 | 9 |
oligodendrocyte | 7.48e-07 | 6 |
macroglial cell | 7.48e-07 | 6 |
astrocyte | 7.48e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
smooth muscle tissue | 3.66e-13 | 3 |
blood vessel smooth muscle | 3.66e-13 | 3 |
arterial system smooth muscle | 3.66e-13 | 3 |
artery smooth muscle tissue | 3.66e-13 | 3 |
aorta smooth muscle tissue | 3.66e-13 | 3 |
aorta | 4.16e-10 | 4 |
artery | 4.16e-10 | 4 |
systemic artery | 4.16e-10 | 4 |
arterial blood vessel | 4.16e-10 | 4 |
systemic arterial system | 4.16e-10 | 4 |
aortic system | 4.16e-10 | 4 |
arterial system | 4.16e-10 | 4 |
skeletal muscle tissue | 1.46e-09 | 9 |
striated muscle tissue | 1.46e-09 | 9 |
muscle tissue | 1.46e-09 | 9 |
multilaminar epithelium | 1.46e-09 | 9 |
epithelial vesicle | 1.46e-09 | 9 |
musculature | 1.46e-09 | 9 |
somite | 1.46e-09 | 9 |
myotome | 1.46e-09 | 9 |
presomitic mesoderm | 1.46e-09 | 9 |
presumptive segmental plate | 1.46e-09 | 9 |
dermomyotome | 1.46e-09 | 9 |
trunk paraxial mesoderm | 1.46e-09 | 9 |
musculature of body | 1.16e-08 | 10 |
vessel | 2.90e-08 | 5 |
epithelial tube open at both ends | 2.90e-08 | 5 |
blood vessel | 2.90e-08 | 5 |
vasculature | 2.90e-08 | 5 |
vascular system | 2.90e-08 | 5 |
blood vasculature | 2.90e-08 | 5 |
vascular cord | 2.90e-08 | 5 |
dense mesenchyme tissue | 6.32e-08 | 11 |
paraxial mesoderm | 6.32e-08 | 11 |
presumptive paraxial mesoderm | 6.32e-08 | 11 |