FFCP PHASE1:Mm9::chr15:42998631..42998636,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=52|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr15:42998631..42998636,-|id=chr15:42998631..42998636,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002293,1.95e-10,3;CL:0000192,1.14e-09,3;CL:0000359,1.14e-09,3;CL:0002539,1.14e-09,3;CL:0000514,1.14e-09,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0001135,1.14e-09,3;UBERON:0004237,1.14e-09,3;UBERON:0004695,1.14e-09,3;UBERON:0002111,1.14e-09,3;UBERON:0004178,1.14e-09,3;UBERON:0002048,5.38e-09,14;UBERON:0000117,5.38e-09,14;UBERON:0000171,5.38e-09,14;UBERON:0000170,5.38e-09,14;UBERON:0005597,5.38e-09,14;UBERON:0000118,5.38e-09,14;UBERON:0000947,2.42e-07,4;UBERON:0001637,2.42e-07,4;UBERON:0004573,2.42e-07,4;UBERON:0003509,2.42e-07,4;UBERON:0004571,2.42e-07,4;UBERON:0010191,2.42e-07,4;UBERON:0004572,2.42e-07,4;UBERON:0000310,2.50e-07,6;UBERON:0001443,2.50e-07,6;UBERON:0005153,3.05e-07,17;UBERON:0005178,3.05e-07,17;UBERON:0005181,3.05e-07,17;UBERON:0002224,3.05e-07,17;UBERON:0000915,3.05e-07,17;UBERON:0008947,3.05e-07,17;UBERON:0003258,3.05e-07,17|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.42073771675444,3.75094645512204,1.83546752161682,0,0,0.878744730937887,1.74986909166855,0.139986421625363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.7104801149461,0.299600110518405,0,0.207379224616955,0,0.210324961351382,0,0.220868540951614,0,0,0,0,0.510749352340751,0,0.791317726381163,0.0914876436024097,1.04182674111352,0,0,0,0,0,0,0,0.0755715601067855,0,0,0,0,0,0,0,19.7699174190547,16.1067322853779,13.0735642568826,0,79.562415996877,76.4415719119937,113.770672504533,0,0,0,0.11418387971906,0,0.148442139064825,0.693941307064543,0.608930956624282,0,0,0.117588707135705,0,0,0,0,0.808834249737046,0.220841518460394,0,0,0,0,0,0,0,0.127070227073065,0.449371918214468,0,0.125654352112864,0.869121600961382,0.511430914660661,0,0.162241263067758,0.305518091550949,0.248813941220186,0,0.631325567659422,0.260240885925407,0,0.540186389416048,0.90422890701429,1.7009124787832,3.33095672740609,1.78033276663485,2.32833033665114,0,0.756424320671277,0.175951124163949,0,0,1.0447564995665,0.61734640922383,0,0,0,0,0,1.17263029990548,0.180062061461015,0,0.196764231747404,0.154267112887378,0,0,0.116765342367169,0.329119699826961,0,0,0,0,0,0.841159794256509,0.617427674275707,0,0,0.213288250535234,0,0.515469845288373,0,0,0.951128130562796,0.949058123089023,0.164698954724011,0.251335208800269,0,0.38992817423824,0.898819408654221,0.216138049874694,0,0,0,0,0,0.193952487167626,0,0,0,0,0,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0.372140947668503,0,0,0,0,0,1.13694847062291,1.46668478797823,1.52770577197669,2.11221223459652,0.167506257441816,0.238043640886014,0.390267295715598,3.62560831444239,2.21464689648775,2.71073106717728,0.163863314715738,0,0.289298117163023,0,0,0,0,0,0,0,0,0,0.390438744296638,0,0.238968797952552,0,0,0.404810701674894,0,1.18586333383957,0,0,0.178065603667255,0.81443479676788,0,0,0,0,0,0,0,0,0.363533729477506,0.356497378384721,0,0,0,0,0.540183282093931,0.258717367565509,0.214337035031592,0.177340233642274,0,0,0,0,0,0,0,0,0.422190474497091,0.119372344003136,0.328281799490123,0,0.370850604021019,0,0,0.185194527369712,0,0,0,0,0,0,0,0.316335993581135,1.62655573701479,0.540026704109006,0.209088296014469,0,0.269728692769641,0.495920734352016,0,0,0,0,0,0,0,0.129159823477731,0,0,0.39061315453185,0.209718688851422,0,0,0,0.405450430580328,0.410843828659309,0.129920822977795,0,0,0.120195449519969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.50786052017682,0,0.920650473014354,0.572895513439397,0,0,0,0.675022500231806,1.80128481289688,1.35942722695261,0.51776031175182,0.415149390336707,1.59609949360412,0.853668028770671,0.243106717068294,0,0.183843508450014,0.44449345560323,0.206035057238894,0.320919209591815,0,0,0.565879024158229,0.561849044819294,0.576226371643824,0.229741875822453,1.90517476513229,0.231768651889711,0.38581844092741,0,0.883193520806384,0.685738504770831,0.354951612318675,0,0.726732083161643,0.0941093804153306,0.25384382367503,0.914639864363863,0,0.679020569229309,1.12228454331548,0.237270036248348,0.985044823755635,0.818462086339379,0.309873682371932,0.578719832943424,0.499621155875892,0.701794825336225,0.644613162144895,0.57386499620653,0.220591419119515,0|short_description=p@chr15:42998631..42998636,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=52 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr15:42998631..42998636,- | |||
|description=CAGE_peak_at_chr15:42998631..42998636,- | |||
|id=chr15:42998631..42998636,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002293,1.95e-10,3;CL:0000192,1.14e-09,3;CL:0000359,1.14e-09,3;CL:0002539,1.14e-09,3;CL:0000514,1.14e-09,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001135,1.14e-09,3;UBERON:0004237,1.14e-09,3;UBERON:0004695,1.14e-09,3;UBERON:0002111,1.14e-09,3;UBERON:0004178,1.14e-09,3;UBERON:0002048,5.38e-09,14;UBERON:0000117,5.38e-09,14;UBERON:0000171,5.38e-09,14;UBERON:0000170,5.38e-09,14;UBERON:0005597,5.38e-09,14;UBERON:0000118,5.38e-09,14;UBERON:0000947,2.42e-07,4;UBERON:0001637,2.42e-07,4;UBERON:0004573,2.42e-07,4;UBERON:0003509,2.42e-07,4;UBERON:0004571,2.42e-07,4;UBERON:0010191,2.42e-07,4;UBERON:0004572,2.42e-07,4;UBERON:0000310,2.50e-07,6;UBERON:0001443,2.50e-07,6;UBERON:0005153,3.05e-07,17;UBERON:0005178,3.05e-07,17;UBERON:0005181,3.05e-07,17;UBERON:0002224,3.05e-07,17;UBERON:0000915,3.05e-07,17;UBERON:0008947,3.05e-07,17;UBERON:0003258,3.05e-07,17 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.42073771675444,3.75094645512204,1.83546752161682,0,0,0.878744730937887,1.74986909166855,0.139986421625363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.7104801149461,0.299600110518405,0,0.207379224616955,0,0.210324961351382,0,0.220868540951614,0,0,0,0,0.510749352340751,0,0.791317726381163,0.0914876436024097,1.04182674111352,0,0,0,0,0,0,0,0.0755715601067855,0,0,0,0,0,0,0,19.7699174190547,16.1067322853779,13.0735642568826,0,79.562415996877,76.4415719119937,113.770672504533,0,0,0,0.11418387971906,0,0.148442139064825,0.693941307064543,0.608930956624282,0,0,0.117588707135705,0,0,0,0,0.808834249737046,0.220841518460394,0,0,0,0,0,0,0,0.127070227073065,0.449371918214468,0,0.125654352112864,0.869121600961382,0.511430914660661,0,0.162241263067758,0.305518091550949,0.248813941220186,0,0.631325567659422,0.260240885925407,0,0.540186389416048,0.90422890701429,1.7009124787832,3.33095672740609,1.78033276663485,2.32833033665114,0,0.756424320671277,0.175951124163949,0,0,1.0447564995665,0.61734640922383,0,0,0,0,0,1.17263029990548,0.180062061461015,0,0.196764231747404,0.154267112887378,0,0,0.116765342367169,0.329119699826961,0,0,0,0,0,0.841159794256509,0.617427674275707,0,0,0.213288250535234,0,0.515469845288373,0,0,0.951128130562796,0.949058123089023,0.164698954724011,0.251335208800269,0,0.38992817423824,0.898819408654221,0.216138049874694,0,0,0,0,0,0.193952487167626,0,0,0,0,0,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0.372140947668503,0,0,0,0,0,1.13694847062291,1.46668478797823,1.52770577197669,2.11221223459652,0.167506257441816,0.238043640886014,0.390267295715598,3.62560831444239,2.21464689648775,2.71073106717728,0.163863314715738,0,0.289298117163023,0,0,0,0,0,0,0,0,0,0.390438744296638,0,0.238968797952552,0,0,0.404810701674894,0,1.18586333383957,0,0,0.178065603667255,0.81443479676788,0,0,0,0,0,0,0,0,0.363533729477506,0.356497378384721,0,0,0,0,0.540183282093931,0.258717367565509,0.214337035031592,0.177340233642274,0,0,0,0,0,0,0,0,0.422190474497091,0.119372344003136,0.328281799490123,0,0.370850604021019,0,0,0.185194527369712,0,0,0,0,0,0,0,0.316335993581135,1.62655573701479,0.540026704109006,0.209088296014469,0,0.269728692769641,0.495920734352016,0,0,0,0,0,0,0,0.129159823477731,0,0,0.39061315453185,0.209718688851422,0,0,0,0.405450430580328,0.410843828659309,0.129920822977795,0,0,0.120195449519969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.50786052017682,0,0.920650473014354,0.572895513439397,0,0,0,0.675022500231806,1.80128481289688,1.35942722695261,0.51776031175182,0.415149390336707,1.59609949360412,0.853668028770671,0.243106717068294,0,0.183843508450014,0.44449345560323,0.206035057238894,0.320919209591815,0,0,0.565879024158229,0.561849044819294,0.576226371643824,0.229741875822453,1.90517476513229,0.231768651889711,0.38581844092741,0,0.883193520806384,0.685738504770831,0.354951612318675,0,0.726732083161643,0.0941093804153306,0.25384382367503,0.914639864363863,0,0.679020569229309,1.12228454331548,0.237270036248348,0.985044823755635,0.818462086339379,0.309873682371932,0.578719832943424,0.499621155875892,0.701794825336225,0.644613162144895,0.57386499620653,0.220591419119515,0 | |||
|short_description=p@chr15:42998631..42998636,- | |||
}} |
Latest revision as of 06:26, 5 August 2015
Short description: | p@chr15:42998631..42998636, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr15:42998631..42998636, - |
Coexpression cluster: | MCL_coexpression_mm9:52 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of thymus | 1.95e-10 | 3 |
smooth muscle cell | 1.14e-09 | 3 |
vascular associated smooth muscle cell | 1.14e-09 | 3 |
aortic smooth muscle cell | 1.14e-09 | 3 |
smooth muscle myoblast | 1.14e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
smooth muscle tissue | 1.14e-09 | 3 |
blood vessel smooth muscle | 1.14e-09 | 3 |
arterial system smooth muscle | 1.14e-09 | 3 |
artery smooth muscle tissue | 1.14e-09 | 3 |
aorta smooth muscle tissue | 1.14e-09 | 3 |
lung | 5.38e-09 | 14 |
respiratory tube | 5.38e-09 | 14 |
respiration organ | 5.38e-09 | 14 |
pair of lungs | 5.38e-09 | 14 |
lung primordium | 5.38e-09 | 14 |
lung bud | 5.38e-09 | 14 |
aorta | 2.42e-07 | 4 |
artery | 2.42e-07 | 4 |
systemic artery | 2.42e-07 | 4 |
arterial blood vessel | 2.42e-07 | 4 |
systemic arterial system | 2.42e-07 | 4 |
aortic system | 2.42e-07 | 4 |
arterial system | 2.42e-07 | 4 |
breast | 2.50e-07 | 6 |
chest | 2.50e-07 | 6 |
epithelial bud | 3.05e-07 | 17 |
thoracic cavity element | 3.05e-07 | 17 |
thoracic segment organ | 3.05e-07 | 17 |
thoracic cavity | 3.05e-07 | 17 |
thoracic segment of trunk | 3.05e-07 | 17 |
respiratory primordium | 3.05e-07 | 17 |
endoderm of foregut | 3.05e-07 | 17 |