FFCP PHASE1:Mm9::chr15:78986963..78986976,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=107|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr15:78986963..78986976,-|id=chr15:78986963..78986976,-|ontology_enrichment_celltype=CL:0000221!5.51e-15!44;CL:0000133!5.51e-15!44;CL:0002319!4.65e-14!43;CL:0000540!7.07e-14!33;CL:0000047!7.07e-14!33;CL:0000031!7.07e-14!33;CL:0000404!7.07e-14!33;CL:0000107!3.59e-12!9;CL:0000055!6.73e-11!50;CL:0000393!1.25e-10!39;CL:0000211!1.25e-10!39|ontology_enrichment_celltype_v019_2=CL:0000221,3.55e-27,44;CL:0000133,3.55e-27,44;CL:0002319,5.48e-25,43;CL:0000540,2.81e-23,33;CL:0000047,2.81e-23,33;CL:0000031,2.81e-23,33;CL:0000404,2.81e-23,33;CL:0000107,3.31e-19,9;CL:0000393,3.32e-19,39;CL:0000211,3.32e-19,39;CL:0002321,1.24e-15,70;CL:0002614,4.88e-10,3;CL:0000117,6.99e-10,23;CL:0000337,6.99e-10,23;CL:0002611,8.45e-08,2;CL:0000217,1.34e-07,2;CL:0000328,1.34e-07,2;CL:0002573,1.34e-07,2;CL:0002376,1.34e-07,2;CL:0000218,1.34e-07,2;CL:0000692,1.34e-07,2;CL:0002377,1.34e-07,2;CL:0002375,1.34e-07,2;CL:0000723,1.74e-07,91;CL:0000048,1.74e-07,91;CL:0000034,8.17e-07,97|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!4.94e-20!75;UBERON:0001016!4.94e-20!75;UBERON:0004121!6.55e-20!102;UBERON:0000924!6.55e-20!102;UBERON:0006601!6.55e-20!102;UBERON:0001017!3.58e-18!73;UBERON:0005743!3.58e-18!73;UBERON:0000010!1.95e-14!11;UBERON:0002410!3.59e-12!9;UBERON:0002346!1.87e-08!71;UBERON:0003075!1.87e-08!71;UBERON:0007284!1.87e-08!71;UBERON:0000033!1.05e-07!63;UBERON:0002298!6.03e-07!6;UBERON:0001049!6.87e-07!52;UBERON:0005068!6.87e-07!52;UBERON:0006241!6.87e-07!52;UBERON:0007135!6.87e-07!52|ontology_enrichment_uberon_v019_2=UBERON:0000010,4.46e-25,11;UBERON:0004121,1.05e-19,95;UBERON:0000924,1.05e-19,95;UBERON:0006601,1.05e-19,95;UBERON:0001016,1.38e-19,75;UBERON:0002410,3.31e-19,9;UBERON:0001017,2.19e-16,73;UBERON:0000011,7.65e-12,3;UBERON:0000013,2.52e-11,3;UBERON:0002038,4.88e-10,3;UBERON:0009663,4.88e-10,3;UBERON:0009661,4.88e-10,3;UBERON:0000125,4.88e-10,3;UBERON:0002308,4.88e-10,3;UBERON:0002240,6.23e-09,6;UBERON:0005174,6.23e-09,6;UBERON:0001137,6.23e-09,6;UBERON:0002256,8.45e-08,2;UBERON:0002950,1.21e-07,4;UBERON:0001891,1.21e-07,4;UBERON:0009616,1.21e-07,4;UBERON:0010286,1.21e-07,4|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05798195854407,0,0.338844532069132,0,0,0,0,3.89480143673926,0.384218305321555,0,0,0,1.71390590642282,1.54607978666129,0,0,0,1.10115880999389,0.383062014255563,1.53606533256243,0,0.0914876436024097,0,1.11673199600552,1.12552522006336,1.22238598221448,0.883885756421003,1.13897344639282,0,1.96888102666279,1.13357340160178,0,0,0,0,0,0,0,0,0,0,1.26759077799012,0,0,0,0,0,0,0,0,0,0.346970653532272,0,0,0.150722640552623,0,0,0,0,0,0,0,0,0,0.292780797011547,0,0,0,0,0,0.149790639404823,0.457500602818626,0,0.347648640384553,0.255715457330331,1.0389402227978,0.486723789203273,0,0,0,2.94618598241064,0,0,0,0,0,0,0.0937017245597288,0.776110112217047,0.215567992932842,0,0,0,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,0.630869845692382,0.308713837137853,0,0,0.213288250535234,0,0.128867461322093,0,0.22237804384487,0.190225626112559,0,0,0.251335208800269,0,0,0,0,0,0,0,1.1270773567308,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.983528546038072,1.65562047782839,0.481651769963376,0.937693492737625,0,0,0.94652465824877,0.780877488593277,4.09304455692318,5.01834475700359,4.01037613348309,3.96307143104365,3.23848561339915,2.33804686329049,1.97643888973262,0.321321316421807,0,0,0,0,0,0,0,0,0.295301892880773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11255181206306,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0.108005340821801,0,0,0,0,0,0,0.621339313086926,0,0.299033092087958,0.165458490457098,0.194451188344048,0.129159823477731,0,0,0,0.209718688851422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38097570952153,1.14579102687879,0.343706364687375,0,0,0.675022500231806,0.900642406448441,0,0,0.103787347584177,0.399024873401031,0,0,0,0,0,0.206035057238894,0,0,0,0,0.187283014939765,0.128050304809739,0.17230640686684,0,0,0,0,0,0,0,0,0.145346416632329,0.0941093804153306,0,0.182927972872773,0,0.135804113845862,0,0,0,0,0,0.192906610981141,0,0,0.429742108096597,0.191288332068843,0.220591419119515,0.231867835620421|short_description=p@chr15:78986963..78986976,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=107 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr15:78986963..78986976,- | |||
|description=CAGE_peak_at_chr15:78986963..78986976,- | |||
|id=chr15:78986963..78986976,- | |||
|ontology_enrichment_celltype=CL:0000221!5.51e-15!44;CL:0000133!5.51e-15!44;CL:0002319!4.65e-14!43;CL:0000540!7.07e-14!33;CL:0000047!7.07e-14!33;CL:0000031!7.07e-14!33;CL:0000404!7.07e-14!33;CL:0000107!3.59e-12!9;CL:0000055!6.73e-11!50;CL:0000393!1.25e-10!39;CL:0000211!1.25e-10!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,3.55e-27,44;CL:0000133,3.55e-27,44;CL:0002319,5.48e-25,43;CL:0000540,2.81e-23,33;CL:0000047,2.81e-23,33;CL:0000031,2.81e-23,33;CL:0000404,2.81e-23,33;CL:0000107,3.31e-19,9;CL:0000393,3.32e-19,39;CL:0000211,3.32e-19,39;CL:0002321,1.24e-15,70;CL:0002614,4.88e-10,3;CL:0000117,6.99e-10,23;CL:0000337,6.99e-10,23;CL:0002611,8.45e-08,2;CL:0000217,1.34e-07,2;CL:0000328,1.34e-07,2;CL:0002573,1.34e-07,2;CL:0002376,1.34e-07,2;CL:0000218,1.34e-07,2;CL:0000692,1.34e-07,2;CL:0002377,1.34e-07,2;CL:0002375,1.34e-07,2;CL:0000723,1.74e-07,91;CL:0000048,1.74e-07,91;CL:0000034,8.17e-07,97 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!4.94e-20!75;UBERON:0001016!4.94e-20!75;UBERON:0004121!6.55e-20!102;UBERON:0000924!6.55e-20!102;UBERON:0006601!6.55e-20!102;UBERON:0001017!3.58e-18!73;UBERON:0005743!3.58e-18!73;UBERON:0000010!1.95e-14!11;UBERON:0002410!3.59e-12!9;UBERON:0002346!1.87e-08!71;UBERON:0003075!1.87e-08!71;UBERON:0007284!1.87e-08!71;UBERON:0000033!1.05e-07!63;UBERON:0002298!6.03e-07!6;UBERON:0001049!6.87e-07!52;UBERON:0005068!6.87e-07!52;UBERON:0006241!6.87e-07!52;UBERON:0007135!6.87e-07!52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000010,4.46e-25,11;UBERON:0004121,1.05e-19,95;UBERON:0000924,1.05e-19,95;UBERON:0006601,1.05e-19,95;UBERON:0001016,1.38e-19,75;UBERON:0002410,3.31e-19,9;UBERON:0001017,2.19e-16,73;UBERON:0000011,7.65e-12,3;UBERON:0000013,2.52e-11,3;UBERON:0002038,4.88e-10,3;UBERON:0009663,4.88e-10,3;UBERON:0009661,4.88e-10,3;UBERON:0000125,4.88e-10,3;UBERON:0002308,4.88e-10,3;UBERON:0002240,6.23e-09,6;UBERON:0005174,6.23e-09,6;UBERON:0001137,6.23e-09,6;UBERON:0002256,8.45e-08,2;UBERON:0002950,1.21e-07,4;UBERON:0001891,1.21e-07,4;UBERON:0009616,1.21e-07,4;UBERON:0010286,1.21e-07,4 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05798195854407,0,0.338844532069132,0,0,0,0,3.89480143673926,0.384218305321555,0,0,0,1.71390590642282,1.54607978666129,0,0,0,1.10115880999389,0.383062014255563,1.53606533256243,0,0.0914876436024097,0,1.11673199600552,1.12552522006336,1.22238598221448,0.883885756421003,1.13897344639282,0,1.96888102666279,1.13357340160178,0,0,0,0,0,0,0,0,0,0,1.26759077799012,0,0,0,0,0,0,0,0,0,0.346970653532272,0,0,0.150722640552623,0,0,0,0,0,0,0,0,0,0.292780797011547,0,0,0,0,0,0.149790639404823,0.457500602818626,0,0.347648640384553,0.255715457330331,1.0389402227978,0.486723789203273,0,0,0,2.94618598241064,0,0,0,0,0,0,0.0937017245597288,0.776110112217047,0.215567992932842,0,0,0,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,0.630869845692382,0.308713837137853,0,0,0.213288250535234,0,0.128867461322093,0,0.22237804384487,0.190225626112559,0,0,0.251335208800269,0,0,0,0,0,0,0,1.1270773567308,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.983528546038072,1.65562047782839,0.481651769963376,0.937693492737625,0,0,0.94652465824877,0.780877488593277,4.09304455692318,5.01834475700359,4.01037613348309,3.96307143104365,3.23848561339915,2.33804686329049,1.97643888973262,0.321321316421807,0,0,0,0,0,0,0,0,0.295301892880773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11255181206306,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0.108005340821801,0,0,0,0,0,0,0.621339313086926,0,0.299033092087958,0.165458490457098,0.194451188344048,0.129159823477731,0,0,0,0.209718688851422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38097570952153,1.14579102687879,0.343706364687375,0,0,0.675022500231806,0.900642406448441,0,0,0.103787347584177,0.399024873401031,0,0,0,0,0,0.206035057238894,0,0,0,0,0.187283014939765,0.128050304809739,0.17230640686684,0,0,0,0,0,0,0,0,0.145346416632329,0.0941093804153306,0,0.182927972872773,0,0.135804113845862,0,0,0,0,0,0.192906610981141,0,0,0.429742108096597,0.191288332068843,0.220591419119515,0.231867835620421 | |||
|short_description=p@chr15:78986963..78986976,- | |||
}} |
Latest revision as of 15:11, 5 August 2015
Short description: | p@chr15:78986963..78986976, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr15:78986963..78986976, - |
Coexpression cluster: | MCL_coexpression_mm9:107 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 3.55e-27 | 44 |
neurectodermal cell | 3.55e-27 | 44 |
neural cell | 5.48e-25 | 43 |
neuron | 2.81e-23 | 33 |
neuronal stem cell | 2.81e-23 | 33 |
neuroblast | 2.81e-23 | 33 |
electrically signaling cell | 2.81e-23 | 33 |
autonomic neuron | 3.31e-19 | 9 |
electrically responsive cell | 3.32e-19 | 39 |
electrically active cell | 3.32e-19 | 39 |
embryonic cell | 1.24e-15 | 70 |
neuron of the substantia nigra | 4.88e-10 | 3 |
CNS neuron (sensu Vertebrata) | 6.99e-10 | 23 |
neuroblast (sensu Vertebrata) | 6.99e-10 | 23 |
neuron of the dorsal spinal cord | 8.45e-08 | 2 |
insulating cell | 1.34e-07 | 2 |
myelin accumulating cell | 1.34e-07 | 2 |
Schwann cell | 1.34e-07 | 2 |
non-myelinating Schwann cell | 1.34e-07 | 2 |
myelinating Schwann cell;;Schwann cell | 1.34e-07 | 2 |
terminal Schwann cell | 1.34e-07 | 2 |
immature Schwann cell | 1.34e-07 | 2 |
Schwann cell precursor | 1.34e-07 | 2 |
somatic stem cell | 1.74e-07 | 91 |
multi fate stem cell | 1.74e-07 | 91 |
stem cell | 8.17e-07 | 97 |
Ontology term | p-value | n |
---|---|---|
peripheral nervous system | 4.46e-25 | 11 |
ectoderm-derived structure | 1.05e-19 | 95 |
ectoderm | 1.05e-19 | 95 |
presumptive ectoderm | 1.05e-19 | 95 |
nervous system | 1.38e-19 | 75 |
autonomic nervous system | 3.31e-19 | 9 |
central nervous system | 2.19e-16 | 73 |
parasympathetic nervous system | 7.65e-12 | 3 |
sympathetic nervous system | 2.52e-11 | 3 |
substantia nigra | 4.88e-10 | 3 |
telencephalic nucleus | 4.88e-10 | 3 |
midbrain nucleus | 4.88e-10 | 3 |
neural nucleus | 4.88e-10 | 3 |
nucleus of brain | 4.88e-10 | 3 |
spinal cord | 6.23e-09 | 6 |
dorsal region element | 6.23e-09 | 6 |
dorsum | 6.23e-09 | 6 |
dorsal horn of spinal cord | 8.45e-08 | 2 |
regional part of midbrain | 1.21e-07 | 4 |
midbrain | 1.21e-07 | 4 |
presumptive midbrain | 1.21e-07 | 4 |
midbrain neural tube | 1.21e-07 | 4 |