FFCP PHASE1:Mm9::chr18:32109524..32109538,-: Difference between revisions
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{{FFCP|EntrezGene=574402|HGNC=|MCL_coexpression_id=107|UniProt=Q6NS65|association_with_transcript=-234bp_to_ENSMUST00000064016,NM_001025381,uc008eiw.2_5end|description=CAGE_peak_6_at_Gpr17_5end|id=chr18:32109524..32109538,-|ontology_enrichment_celltype=CL:0000107!7.54e-11!9;CL:0000540!4.96e-09!33;CL:0000047!4.96e-09!33;CL:0000031!4.96e-09!33;CL:0000404!4.96e-09!33;CL:0002319!9.18e-07!43|ontology_enrichment_celltype_v019_2=CL:0000107,2.28e-47,9;CL:0000540,1.11e-29,33;CL:0000047,1.11e-29,33;CL:0000031,1.11e-29,33;CL:0000404,1.11e-29,33;CL:0000393,7.75e-25,39;CL:0000211,7.75e-25,39;CL:0002319,2.34e-22,43;CL:0000221,8.32e-22,44;CL:0000133,8.32e-22,44;CL:0002321,5.39e-13,70;CL:0002611,1.67e-11,2;CL:0000723,1.57e-09,91;CL:0000048,1.57e-09,91;CL:0000034,8.17e-09,97;CL:0002612,1.10e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!1.78e-13!102;UBERON:0000924!1.78e-13!102;UBERON:0006601!1.78e-13!102;UBERON:0001017!2.39e-11!73;UBERON:0005743!2.39e-11!73;UBERON:0002410!7.54e-11!9;UBERON:0000073!1.07e-10!75;UBERON:0001016!1.07e-10!75;UBERON:0002346!5.23e-10!71;UBERON:0003075!5.23e-10!71;UBERON:0007284!5.23e-10!71;UBERON:0000010!2.83e-08!11|ontology_enrichment_uberon_v019_2=UBERON:0002410,2.28e-47,9;UBERON:0000010,1.39e-38,11;UBERON:0000011,1.90e-17,3;UBERON:0000013,7.36e-17,3;UBERON:0001948,8.67e-17,5;UBERON:0002315,8.67e-17,5;UBERON:0010313,3.53e-16,3;UBERON:0002342,3.53e-16,3;UBERON:0002005,3.53e-16,3;UBERON:0005428,3.53e-16,3;UBERON:0005062,3.53e-16,3;UBERON:0001017,2.41e-14,73;UBERON:0002240,4.91e-14,6;UBERON:0005174,4.91e-14,6;UBERON:0001137,4.91e-14,6;UBERON:0001016,6.58e-14,75;UBERON:0002256,1.67e-11,2;UBERON:0004121,1.53e-10,95;UBERON:0000924,1.53e-10,95;UBERON:0006601,1.53e-10,95;UBERON:0002257,1.10e-07,3;UBERON:0003076,4.12e-07,12;UBERON:0003057,4.12e-07,12|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.528990979272033,0,0,0,0,0,0,0.299600110518405,0.384218305321555,0,0,0,3.14216082844184,2.87129103237098,0,0,0,2.20231761998777,0.383062014255563,0.153606533256243,0.131886287730194,0.0914876436024097,0,0.837548997004143,0,0,1.47314292736834,1.28134512719193,0.186399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04091196059682,0.608930956624282,0.691846491768175,0.150722640552623,0.117588707135705,0,0,0,0,0,0,0,0,0.292780797011547,0,0,0,0,0,0.449371918214468,0,0,0,0,0.62336413367868,0.648965052271031,0.101839363850316,0,0,0,0.130120442962704,0,0.360124259610698,0.452114453507145,0.0680364991513279,0.12811372028485,0.281105173679186,0.258703370739016,0,0,0.175951124163949,0,0,0,0,0,0,0,0,0,0.234526059981096,0,0.23674473558521,0,0,0,0,0,0,0,0,0.146199987425332,0,0,0.630869845692382,0,0,0,0.426576501070468,0.696710015581316,0.128867461322093,0.605050573870028,0.444756087689741,0.190225626112559,0,0,0.502670417600539,0.198956472041151,0.38992817423824,0,0,0,0,0,0,0,0,0,0.126473074248515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568474235311454,0.162964976442026,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0.468846746368813,0,0,1.57754109708128,1.17131623288992,6.67812532971677,8.12493913038677,11.1399337041197,14.7199796010193,4.04810701674894,7.01414058987149,6.32460444714438,0,0,0,0,0,0,0.242780636154981,0,0.377210159511796,0,0.307435147943927,0,0.727067458955011,0,0,0,0,0,0.18006109403131,0.129358683782755,0.214337035031592,0.177340233642274,0,0,0,0,0,0,0,0.322928853391811,0.301564624640779,0.238744688006273,0,0,0.556275906031529,0,0,0,0,0,0,0,0,0,0,0.949007980743406,1.01659733563424,0.432021363287205,0.418176592028937,0.87345025498471,0.539457385539283,0.41326727862668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12950368523413,0.920650473014354,0.572895513439397,0.171853182343688,0,0.755393897389701,0,0.45032120322422,0,0,0.103787347584177,0.399024873401031,0.341467211508268,0.486213434136588,0.209613162627982,0.183843508450014,0,0,0,0,0.50695859978048,0.188626341386076,0,0.0640251524048693,0.287177344778066,0,0,0.192909220463705,0.412085900803307,0.294397840268795,0,0.354951612318675,0,0.145346416632329,0.470546902076653,0.423073039458382,0,0.526139422875686,0,0,0.474540072496697,0.0985044823755635,0,0,0.385813221962283,0.499621155875892,0,0.214871054048298,0,0.220591419119515,0.695603506861264|short_description=p6@Gpr17}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:574402 | |||
|HGNC= | |||
|MCL_coexpression_id=107 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q6NS65 | |||
|association_with_transcript=-234bp_to_ENSMUST00000064016,NM_001025381,uc008eiw.2_5end | |||
|cluster_id=chr18:32109524..32109538,- | |||
|description=CAGE_peak_6_at_Gpr17_5end | |||
|id=chr18:32109524..32109538,- | |||
|ontology_enrichment_celltype=CL:0000107!7.54e-11!9;CL:0000540!4.96e-09!33;CL:0000047!4.96e-09!33;CL:0000031!4.96e-09!33;CL:0000404!4.96e-09!33;CL:0002319!9.18e-07!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000107,2.28e-47,9;CL:0000540,1.11e-29,33;CL:0000047,1.11e-29,33;CL:0000031,1.11e-29,33;CL:0000404,1.11e-29,33;CL:0000393,7.75e-25,39;CL:0000211,7.75e-25,39;CL:0002319,2.34e-22,43;CL:0000221,8.32e-22,44;CL:0000133,8.32e-22,44;CL:0002321,5.39e-13,70;CL:0002611,1.67e-11,2;CL:0000723,1.57e-09,91;CL:0000048,1.57e-09,91;CL:0000034,8.17e-09,97;CL:0002612,1.10e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!1.78e-13!102;UBERON:0000924!1.78e-13!102;UBERON:0006601!1.78e-13!102;UBERON:0001017!2.39e-11!73;UBERON:0005743!2.39e-11!73;UBERON:0002410!7.54e-11!9;UBERON:0000073!1.07e-10!75;UBERON:0001016!1.07e-10!75;UBERON:0002346!5.23e-10!71;UBERON:0003075!5.23e-10!71;UBERON:0007284!5.23e-10!71;UBERON:0000010!2.83e-08!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002410,2.28e-47,9;UBERON:0000010,1.39e-38,11;UBERON:0000011,1.90e-17,3;UBERON:0000013,7.36e-17,3;UBERON:0001948,8.67e-17,5;UBERON:0002315,8.67e-17,5;UBERON:0010313,3.53e-16,3;UBERON:0002342,3.53e-16,3;UBERON:0002005,3.53e-16,3;UBERON:0005428,3.53e-16,3;UBERON:0005062,3.53e-16,3;UBERON:0001017,2.41e-14,73;UBERON:0002240,4.91e-14,6;UBERON:0005174,4.91e-14,6;UBERON:0001137,4.91e-14,6;UBERON:0001016,6.58e-14,75;UBERON:0002256,1.67e-11,2;UBERON:0004121,1.53e-10,95;UBERON:0000924,1.53e-10,95;UBERON:0006601,1.53e-10,95;UBERON:0002257,1.10e-07,3;UBERON:0003076,4.12e-07,12;UBERON:0003057,4.12e-07,12 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.528990979272033,0,0,0,0,0,0,0.299600110518405,0.384218305321555,0,0,0,3.14216082844184,2.87129103237098,0,0,0,2.20231761998777,0.383062014255563,0.153606533256243,0.131886287730194,0.0914876436024097,0,0.837548997004143,0,0,1.47314292736834,1.28134512719193,0.186399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04091196059682,0.608930956624282,0.691846491768175,0.150722640552623,0.117588707135705,0,0,0,0,0,0,0,0,0.292780797011547,0,0,0,0,0,0.449371918214468,0,0,0,0,0.62336413367868,0.648965052271031,0.101839363850316,0,0,0,0.130120442962704,0,0.360124259610698,0.452114453507145,0.0680364991513279,0.12811372028485,0.281105173679186,0.258703370739016,0,0,0.175951124163949,0,0,0,0,0,0,0,0,0,0.234526059981096,0,0.23674473558521,0,0,0,0,0,0,0,0,0.146199987425332,0,0,0.630869845692382,0,0,0,0.426576501070468,0.696710015581316,0.128867461322093,0.605050573870028,0.444756087689741,0.190225626112559,0,0,0.502670417600539,0.198956472041151,0.38992817423824,0,0,0,0,0,0,0,0,0,0.126473074248515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568474235311454,0.162964976442026,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0.468846746368813,0,0,1.57754109708128,1.17131623288992,6.67812532971677,8.12493913038677,11.1399337041197,14.7199796010193,4.04810701674894,7.01414058987149,6.32460444714438,0,0,0,0,0,0,0.242780636154981,0,0.377210159511796,0,0.307435147943927,0,0.727067458955011,0,0,0,0,0,0.18006109403131,0.129358683782755,0.214337035031592,0.177340233642274,0,0,0,0,0,0,0,0.322928853391811,0.301564624640779,0.238744688006273,0,0,0.556275906031529,0,0,0,0,0,0,0,0,0,0,0.949007980743406,1.01659733563424,0.432021363287205,0.418176592028937,0.87345025498471,0.539457385539283,0.41326727862668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12950368523413,0.920650473014354,0.572895513439397,0.171853182343688,0,0.755393897389701,0,0.45032120322422,0,0,0.103787347584177,0.399024873401031,0.341467211508268,0.486213434136588,0.209613162627982,0.183843508450014,0,0,0,0,0.50695859978048,0.188626341386076,0,0.0640251524048693,0.287177344778066,0,0,0.192909220463705,0.412085900803307,0.294397840268795,0,0.354951612318675,0,0.145346416632329,0.470546902076653,0.423073039458382,0,0.526139422875686,0,0,0.474540072496697,0.0985044823755635,0,0,0.385813221962283,0.499621155875892,0,0.214871054048298,0,0.220591419119515,0.695603506861264 | |||
|short_description=p6@Gpr17 | |||
}} |
Revision as of 15:16, 5 August 2015
Short description: | p6@Gpr17 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Gpr17_5end |
Coexpression cluster: | MCL_coexpression_mm9:107 |
Association with transcript: | -234bp_to_ENSMUST00000064016, NM_001025381, uc008eiw.2_5end |
EntrezGene: | 574402 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
autonomic neuron | 2.28e-47 | 9 |
neuron | 1.11e-29 | 33 |
neuronal stem cell | 1.11e-29 | 33 |
neuroblast | 1.11e-29 | 33 |
electrically signaling cell | 1.11e-29 | 33 |
electrically responsive cell | 7.75e-25 | 39 |
electrically active cell | 7.75e-25 | 39 |
neural cell | 2.34e-22 | 43 |
ectodermal cell | 8.32e-22 | 44 |
neurectodermal cell | 8.32e-22 | 44 |
embryonic cell | 5.39e-13 | 70 |
neuron of the dorsal spinal cord | 1.67e-11 | 2 |
somatic stem cell | 1.57e-09 | 91 |
multi fate stem cell | 1.57e-09 | 91 |
stem cell | 8.17e-09 | 97 |
neuron of the ventral spinal cord | 1.10e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
autonomic nervous system | 2.28e-47 | 9 |
peripheral nervous system | 1.39e-38 | 11 |
parasympathetic nervous system | 1.90e-17 | 3 |
sympathetic nervous system | 7.36e-17 | 3 |
regional part of spinal cord | 8.67e-17 | 5 |
gray matter of spinal cord | 8.67e-17 | 5 |
neural crest-derived structure | 3.53e-16 | 3 |
neural crest | 3.53e-16 | 3 |
enteric nervous system | 3.53e-16 | 3 |
vagal neural crest | 3.53e-16 | 3 |
neural fold | 3.53e-16 | 3 |
central nervous system | 2.41e-14 | 73 |
spinal cord | 4.91e-14 | 6 |
dorsal region element | 4.91e-14 | 6 |
dorsum | 4.91e-14 | 6 |
nervous system | 6.58e-14 | 75 |
dorsal horn of spinal cord | 1.67e-11 | 2 |
ectoderm-derived structure | 1.53e-10 | 95 |
ectoderm | 1.53e-10 | 95 |
presumptive ectoderm | 1.53e-10 | 95 |
ventral horn of spinal cord | 1.10e-07 | 3 |
posterior neural tube | 4.12e-07 | 12 |
chordal neural plate | 4.12e-07 | 12 |