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FFCP PHASE1:Mm9::chr9:7872985..7873009,-: Difference between revisions

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{{FFCP|EntrezGene=11796|HGNC=|MCL_coexpression_id=66|UniProt=A2CGA3|association_with_transcript=-2bp_to_ENSMUST00000115672_5end|description=CAGE_peak_4_at_Birc3_5end|id=chr9:7872985..7873009,-|ontology_enrichment_celltype=CL:0000988!2.51e-07!32;CL:0002032!2.51e-07!32;CL:0000037!2.51e-07!32;CL:0000566!2.51e-07!32;CL:0000837!2.51e-07!32;CL:0000791!6.03e-07!9;CL:0000789!6.03e-07!9;CL:0002420!6.03e-07!9;CL:0002419!6.03e-07!9;CL:0000790!6.03e-07!9|ontology_enrichment_celltype_v019_2=CL:0000988,2.75e-09,32;CL:0002032,2.75e-09,32;CL:0000037,2.75e-09,32;CL:0000837,2.75e-09,32;CL:0000791,1.68e-08,9;CL:0000789,1.68e-08,9;CL:0002420,1.68e-08,9;CL:0002419,1.68e-08,9;CL:0000790,1.68e-08,9;CL:0000624,9.14e-08,8;CL:0002320,3.93e-07,46;CL:0000134,3.93e-07,46;CL:0000838,4.46e-07,12;CL:0002031,8.41e-07,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000926!6.03e-13!193;UBERON:0004120!6.03e-13!193;UBERON:0006603!6.03e-13!193;UBERON:0003081!3.69e-12!88;UBERON:0002193!4.06e-11!48;UBERON:0002390!5.47e-11!45;UBERON:0003061!5.47e-11!45;UBERON:0002405!1.27e-10!70;UBERON:0003104!2.03e-10!131;UBERON:0009142!2.03e-10!131;UBERON:0001004!2.24e-08!42;UBERON:0000065!5.79e-08!41;UBERON:0002204!9.79e-08!32;UBERON:0000077!1.07e-07!97;UBERON:0004177!2.68e-07!29;UBERON:0000072!4.02e-07!27;UBERON:0001041!6.80e-07!92;UBERON:0005057!9.29e-07!51|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.45e-12,48;UBERON:0002405,1.45e-12,48;UBERON:0002390,2.52e-12,45;UBERON:0003061,2.52e-12,45;UBERON:0003081,4.77e-11,87;UBERON:0000926,1.51e-10,120;UBERON:0004120,1.51e-10,120;UBERON:0006603,1.51e-10,120;UBERON:0000077,5.95e-10,35;UBERON:0001004,7.62e-10,42;UBERON:0000065,2.53e-09,41;UBERON:0002204,8.55e-09,32;UBERON:0004177,1.22e-08,29;UBERON:0005057,1.22e-08,29;UBERON:0000072,5.53e-08,27;UBERON:0001041,7.65e-08,80;UBERON:0003408,1.09e-07,24;UBERON:0002370,3.75e-07,23;UBERON:0000974,3.75e-07,23;UBERON:0004807,3.75e-07,23;UBERON:0005058,3.75e-07,23;UBERON:0003351,3.75e-07,23;UBERON:0009113,3.75e-07,23;UBERON:0003295,3.75e-07,23;UBERON:0009722,3.75e-07,23;UBERON:0005562,3.75e-07,23;UBERON:0007690,3.75e-07,23;UBERON:0002384,3.93e-07,46;UBERON:0000490,5.97e-07,66|phase1_expression=0.640595388419176,0.348975407639361,0,0,0.500895729946347,1.34303417529512,1.86890112476421,8.65126267058561,9.99599927276834,11.4691617897777,7.0199366972457,6.94017783259427,9.75844160607873,8.47977903464275,1.33243904726265,3.23960427823721,0.699561878128147,5.8360500591274,8.5010948835558,5.51706547337439,1.44573593256819,0.397163804803541,0.783599367416806,0.319984845586813,1.14704640533585,0.57423196411502,0.86152399231815,0.646413698057667,0.570070258369122,0.252030129759931,0.221730510655305,0,0,0,0.288851619751275,0.166234645358492,0.408338712524738,6.69650609179052,10.1573594788094,4.71171369576418,17.6469446409304,20.4913645487534,7.76816564849846,2.39203954153597,2.43304634926835,2.38610777810186,0.782391344348039,0.218025156380447,0.219686182734472,0.194429899074283,0.279972843250725,0,11.9125650300993,9.42970784614748,7.39406358113421,6.17422646486273,6.01720223871389,5.15672092277442,0.202316460859598,0,0,0.338844532069132,0.889294796111139,1.7997994345628,0.988866362566974,2.8419204597844,0.898800331555214,0,0,0.405017814995072,0,0,0.883474163806454,0.244981598429908,0.0958454710182364,0,0,0.255374676170375,0,0.131886287730194,0.0914876436024097,0,0.279182999001381,0,0.61119299110724,0.294628585473668,0.142371680799103,0.186399445825301,0.454357159999104,0.302286240427142,14.7830889237856,6.0229671388697,1.3599426674155,0.539703191637817,0.649776417447669,0.448026887097336,0.702222100658759,0,0.259786004602869,0.35333957451034,0.14084341977668,0,0,7.11066703153331,3.24736561516821,4.05375784760158,2.52762222507392,1.25602267690966,14.5005214842416,1.7813056687779,0.693941307064543,1.82679286987285,0.922461989024234,1.95939432718409,1.41106448562846,1.0053327306374,1.97755974187499,2.4581890676385,2.65383165584962,0.161766849947409,2.20841518460394,1.93950101254089,0,0,0.209446706813455,2.04365644166873,4.79260498023681,4.79922184794726,3.81210681219194,0.299581278809645,0.457500602818626,0,0.173824320192276,0.255715457330331,0.41557608911912,0.324482526135515,0.81471491080253,1.7416975885413,1.0108910337347,0,0.260240885925407,0,0.180062129805349,0.30140963567143,0.408218994907967,0.512454881139399,0.281105173679186,0.258703370739016,0.431135985865684,0.189106080167819,0.351902248327898,0.219195732427575,0.834141747676794,0.696504333044333,0.411564272815887,0.199034266818493,4.91549231119264,3.08817488537658,2.55747149456033,0.414251545071004,0.469052119962192,0,1.42046841351126,0.393528463494808,0.462801338662135,0.697601834251224,0.804820204198858,0.583826711835847,0.658239399653922,1.14917224855367,0.810688095458557,1.46199987425332,3.95190207523891,1.8788898626452,0.420579897128254,0.308713837137853,1.65209391491899,0.264450566663544,0.426576501070468,0.232236671860439,0.257734922644187,0.201683524623343,1.1118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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:11796
|HGNC=
|MCL_coexpression_id=66
|TSSclassifier=NA
|UniProt=uniprot:A2CGA3
|association_with_transcript=-2bp_to_ENSMUST00000115672_5end
|cluster_id=chr9:7872985..7873009,-
|description=CAGE_peak_4_at_Birc3_5end
|id=chr9:7872985..7873009,-
|ontology_enrichment_celltype=CL:0000988!2.51e-07!32;CL:0002032!2.51e-07!32;CL:0000037!2.51e-07!32;CL:0000566!2.51e-07!32;CL:0000837!2.51e-07!32;CL:0000791!6.03e-07!9;CL:0000789!6.03e-07!9;CL:0002420!6.03e-07!9;CL:0002419!6.03e-07!9;CL:0000790!6.03e-07!9
|ontology_enrichment_celltype_v019_2=CL:0000988,2.75e-09,32;CL:0002032,2.75e-09,32;CL:0000037,2.75e-09,32;CL:0000837,2.75e-09,32;CL:0000791,1.68e-08,9;CL:0000789,1.68e-08,9;CL:0002420,1.68e-08,9;CL:0002419,1.68e-08,9;CL:0000790,1.68e-08,9;CL:0000624,9.14e-08,8;CL:0002320,3.93e-07,46;CL:0000134,3.93e-07,46;CL:0000838,4.46e-07,12;CL:0002031,8.41e-07,25
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000926!6.03e-13!193;UBERON:0004120!6.03e-13!193;UBERON:0006603!6.03e-13!193;UBERON:0003081!3.69e-12!88;UBERON:0002193!4.06e-11!48;UBERON:0002390!5.47e-11!45;UBERON:0003061!5.47e-11!45;UBERON:0002405!1.27e-10!70;UBERON:0003104!2.03e-10!131;UBERON:0009142!2.03e-10!131;UBERON:0001004!2.24e-08!42;UBERON:0000065!5.79e-08!41;UBERON:0002204!9.79e-08!32;UBERON:0000077!1.07e-07!97;UBERON:0004177!2.68e-07!29;UBERON:0000072!4.02e-07!27;UBERON:0001041!6.80e-07!92;UBERON:0005057!9.29e-07!51
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.45e-12,48;UBERON:0002405,1.45e-12,48;UBERON:0002390,2.52e-12,45;UBERON:0003061,2.52e-12,45;UBERON:0003081,4.77e-11,87;UBERON:0000926,1.51e-10,120;UBERON:0004120,1.51e-10,120;UBERON:0006603,1.51e-10,120;UBERON:0000077,5.95e-10,35;UBERON:0001004,7.62e-10,42;UBERON:0000065,2.53e-09,41;UBERON:0002204,8.55e-09,32;UBERON:0004177,1.22e-08,29;UBERON:0005057,1.22e-08,29;UBERON:0000072,5.53e-08,27;UBERON:0001041,7.65e-08,80;UBERON:0003408,1.09e-07,24;UBERON:0002370,3.75e-07,23;UBERON:0000974,3.75e-07,23;UBERON:0004807,3.75e-07,23;UBERON:0005058,3.75e-07,23;UBERON:0003351,3.75e-07,23;UBERON:0009113,3.75e-07,23;UBERON:0003295,3.75e-07,23;UBERON:0009722,3.75e-07,23;UBERON:0005562,3.75e-07,23;UBERON:0007690,3.75e-07,23;UBERON:0002384,3.93e-07,46;UBERON:0000490,5.97e-07,66
|phase1_expression=0.640595388419176,0.348975407639361,0,0,0.500895729946347,1.34303417529512,1.86890112476421,8.65126267058561,9.99599927276834,11.4691617897777,7.0199366972457,6.94017783259427,9.75844160607873,8.47977903464275,1.33243904726265,3.23960427823721,0.699561878128147,5.8360500591274,8.5010948835558,5.51706547337439,1.44573593256819,0.397163804803541,0.783599367416806,0.319984845586813,1.14704640533585,0.57423196411502,0.86152399231815,0.646413698057667,0.570070258369122,0.252030129759931,0.221730510655305,0,0,0,0.288851619751275,0.166234645358492,0.408338712524738,6.69650609179052,10.1573594788094,4.71171369576418,17.6469446409304,20.4913645487534,7.76816564849846,2.39203954153597,2.43304634926835,2.38610777810186,0.782391344348039,0.218025156380447,0.219686182734472,0.194429899074283,0.279972843250725,0,11.9125650300993,9.42970784614748,7.39406358113421,6.17422646486273,6.01720223871389,5.15672092277442,0.202316460859598,0,0,0.338844532069132,0.889294796111139,1.7997994345628,0.988866362566974,2.8419204597844,0.898800331555214,0,0,0.405017814995072,0,0,0.883474163806454,0.244981598429908,0.0958454710182364,0,0,0.255374676170375,0,0.131886287730194,0.0914876436024097,0,0.279182999001381,0,0.61119299110724,0.294628585473668,0.142371680799103,0.186399445825301,0.454357159999104,0.302286240427142,14.7830889237856,6.0229671388697,1.3599426674155,0.539703191637817,0.649776417447669,0.448026887097336,0.702222100658759,0,0.259786004602869,0.35333957451034,0.14084341977668,0,0,7.11066703153331,3.24736561516821,4.05375784760158,2.52762222507392,1.25602267690966,14.5005214842416,1.7813056687779,0.693941307064543,1.82679286987285,0.922461989024234,1.95939432718409,1.41106448562846,1.0053327306374,1.97755974187499,2.4581890676385,2.65383165584962,0.161766849947409,2.20841518460394,1.93950101254089,0,0,0.209446706813455,2.04365644166873,4.79260498023681,4.79922184794726,3.81210681219194,0.299581278809645,0.457500602818626,0,0.173824320192276,0.255715457330331,0.41557608911912,0.324482526135515,0.81471491080253,1.7416975885413,1.0108910337347,0,0.260240885925407,0,0.180062129805349,0.30140963567143,0.408218994907967,0.512454881139399,0.281105173679186,0.258703370739016,0.431135985865684,0.189106080167819,0.351902248327898,0.219195732427575,0.834141747676794,0.696504333044333,0.411564272815887,0.199034266818493,4.91549231119264,3.08817488537658,2.55747149456033,0.414251545071004,0.469052119962192,0,1.42046841351126,0.393528463494808,0.462801338662135,0.697601834251224,0.804820204198858,0.583826711835847,0.658239399653922,1.14917224855367,0.810688095458557,1.46199987425332,3.95190207523891,1.8788898626452,0.420579897128254,0.308713837137853,1.65209391491899,0.264450566663544,0.426576501070468,0.232236671860439,0.257734922644187,0.201683524623343,1.11189021922435,0.760902504450237,1.89811624617805,0.164698954724011,0.754005626400808,1.39269530428806,0.974820435595601,2.69645822596266,2.37751854862164,2.58883655230677,0,0.228497025219458,0,0.814605311381257,1.35766741017338,0.420814919341911,0.442655759869801,0.295220295959204,1.8839847340965,0.863780147452604,0.296452627087149,0.166845105716094,0.196558995113203,1.12431056192427,0.608580364165509,0.72353147925725,1.2731292589071,2.87696137450811,2.43202840162553,1.37280706594041,1.43768206527355,0.744281895337007,2.80833905803104,1.01031551178845,0.538192240565737,0.482443521363367,4.61882975416512,0,0.162964976442026,0.678980343100753,0.469380496577004,1.67506257441816,1.42826184531608,3.31727201358258,1.26108115284953,1.55025282754142,1.91345722388985,3.4411296090305,3.62638461918381,3.18227928879325,9.04747703635634,7.61467957346193,2.45882136509518,3.58717770196152,0.321101179975584,0.468846746368813,1.3114795630134,1.26235463602186,0.94652465824877,1.17131623288992,0,0,0,0,0,0.292255857911312,0.395287777946524,0.642642632843614,1.84522110770749,0.534196811001766,0,3.13443233647817,1.32745138339963,0.242780636154981,0,0.565815239267694,0.295301892880773,0.922305443831782,1.55056975900933,0.363533729477506,0.356497378384721,1.58018378967908,2.10837217149998,0,0.680879211507576,0.36012218806262,0.258717367565509,0.643011105094777,0.354680467284547,0.356737635204141,0.329098041204242,0,0.704015124191131,1.90648863777438,1.7642271844397,2.96795255294664,1.93757312035087,0.784068024066026,1.07435109602823,0.492422699235184,3.20628920292836,0.370850604021019,4.78438466233988,0.412773735926445,2.03713980106683,2.82552685507037,1.91371918809435,3.20289442489132,12.4084253895514,9.51669875800874,11.1941978781583,1.90934123603023,0.158167996790568,0.203319467126849,0.540026704109006,0.836353184057875,0.655087691238533,0.404593039154462,0.909188012978695,1.57053565190418,0.518459893167171,4.34937519160848,0,0.448549638131936,0,0.583353565032143,0.387479470433193,0.844780627453891,0.704143431874524,0.39061315453185,0.419437377702843,0,0.288030006257865,4.74016680942267,1.41907650703115,0.924398614483445,2.7283372825337,2.14832034800978,0.993406773906324,1.32214994471966,2.80610101631697,1.31256384932592,1.5241361331,2.52065462842101,2.92373642219257,1.6356013078856,2.92192255453922,0.906921534460845,0.665957860122194,0,1.34307693091263,2.31827512838629,2.064507229963,5.31139710375069,1.92931541171159,1.00314420807073,0,0,0.572895513439397,0.343706364687375,0,0,0.675022500231806,0.45032120322422,0,0,0,0,0,0.729320151204882,0.628839487883947,0.367687016900028,1.11123363900808,0.824140228955577,0.320919209591815,0.505394423527595,0.25347929989024,0.943131706930381,0.936415074698824,0.576226371643824,0.861532034334199,0,0.463537303779422,0.964546102318525,0.412085900803307,1.03039244094078,1.02860775715625,0.887379030796687,0.953744759789284,1.16277133305863,0,0.761531471025089,0.548783918618318,1.05227884575137,0.543216455383447,2.24456908663095,1.06771516311757,0.788035859004508,0.409231043169689,0.619747364743864,0.578719832943424,0.499621155875892,0.233931608445408,0.214871054048298,1.72159498861959,1.32354851471709,3.01428186306548
|short_description=p4@Birc3
}}

Revision as of 16:54, 5 August 2015

Short description:p4@Birc3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Birc3_5end
Coexpression cluster:MCL_coexpression_mm9:66
Association with transcript: -2bp_to_ENSMUST00000115672_5end
EntrezGene:11796
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Birc3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.64
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I81.87
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E98.65
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E710.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F211.47
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E67.02
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F16.94
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E49.76
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E88.48
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A33.24
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A25.84
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A48.50
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A65.52
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.45
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.40
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.78
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.32
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.15
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I10.86
GP2+ M cell, pool3.CNhs13240.11847-124I20.65
Ileum epithelium, pool1.CNhs13199.10252-104B90.57
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.41
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G86.70
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H110.16
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H34.71
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G917.65
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H220.49
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H47.77
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D82.39
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D92.43
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B32.39
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.28
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A211.91
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I99.43
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A17.39
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C16.17
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E16.02
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C55.16
Mouse Granule cells, donor1.CNhs12131.11713-123C30.20
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C71.80
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D22.84
Mouse Microglia, donor1.CNhs12629.11718-123C80.90
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.41
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.88
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.24
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.10
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.26
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.13
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.09
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.28
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.61
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.29
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.14
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.19
Mouse Schwann, donor1.CNhs12507.11728-123D90.45
Mouse Schwann, donor2.CNhs12573.11746-123F90.30
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G314.78
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F76.02
Mouse hepatocyte, donor1.CNhs13078.11714-123C41.36
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.70
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G13.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G24.05
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G32.53
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.26
accessory axillary lymph node, adult.CNhs10475.1063-29H914.50
adrenal gland, adult.CNhs10508.49-24D71.78
adrenal gland, embryo E14.CNhs11038.406-44C50.69
adrenal gland, embryo E16.CNhs11004.1254-43D61.83
adrenal gland, embryo E17.CNhs11043.1263-45I10.92
adrenal gland, embryo E18.CNhs11026.1262-18F51.96
adrenal gland, neonate N00.CNhs11191.1311-23C11.41
adrenal gland, neonate N25.CNhs11223.1377-27I31.01
amnion, adult pregnant day17.5.CNhs10488.583-22A81.98
aorta, adult.CNhs10498.46-23H12.46
bone (os femoris), adult.CNhs10483.56-12G22.65
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A62.21
bone (os femoris), neonate N20.CNhs11195.1350-25C31.94
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.21
colon, adult.CNhs10468.36-18H72.04
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C74.79
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D14.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D43.81
corpora quadrigemina, adult.CNhs10501.16-22A40.30
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.17
cortex, neonate N30.CNhs11107.1392-42F20.26
diencephalon, adult.CNhs10482.20-12F20.42
diencephalon, neonate N30.CNhs11201.1388-42B20.32
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.81
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.74
epididymis, adult.CNhs10490.58-23B21.01
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.30
eyeball, neonate N00.CNhs11207.633-15C60.41
eyeball, neonate N01.CNhs11140.1532-43E70.51
eyeball, neonate N02.CNhs11205.1551-44G80.28
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E20.43
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.83
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C84.92
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D23.09
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D52.56
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D41.42
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.46
heart, embryo E17.CNhs11025.479-18E50.70
heart, embryo E18.CNhs11030.1283-20G30.80
heart, neonate N00.CNhs11213.639-21E30.58
heart, neonate N03.CNhs11221.1349-25I20.66
heart, neonate N10.CNhs11118.749-24G11.15
heart, neonate N16.CNhs11209.782-15G10.81
heart, neonate N20.CNhs11127.821-26I61.46
heart, neonate N25.CNhs11196.1351-25D33.95
heart, neonate N30.CNhs11202.1390-42D21.88
hippocampus, adult.CNhs10478.13-16E80.42
hippocampus, neonate N00.CNhs11228.627-43G10.31
intestinal mucosa, adult.CNhs10506.860-29I31.65
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D31.11
intestine, embryo E18.CNhs10526.1289-20F70.76
intestine, neonate N00.CNhs11126.644-26D11.90
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.75
intestine, neonate N07.CNhs11095.720-20F21.39
intestine, neonate N10.CNhs11098.755-23A50.97
intestine, neonate N20.CNhs11187.827-18D12.70
intestine, neonate N25.CNhs11121.1352-25E32.38
intestine, neonate N30.CNhs11131.1384-42G12.59
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.81
kidney, embryo E18.CNhs11001.1288-20C71.36
kidney, neonate N00.CNhs11214.646-21G70.42
kidney, neonate N10.CNhs11206.758-6D50.44
kidney, neonate N20.CNhs11113.832-19I10.30
kidney, neonate N25.CNhs11122.1353-25F31.88
kidney, neonate N30.CNhs11203.1385-42H10.86
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E11.12
liver, embryo E15.CNhs10520.433-16D70.61
liver, embryo E16.CNhs10523.462-17F50.72
liver, embryo E17.CNhs10510.481-18A31.27
liver, embryo E18.CNhs10579.499-43G42.88
liver, neonate N00.CNhs11117.641-24F42.43
liver, neonate N03.CNhs11123.1345-25G21.37
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.74
liver, neonate N10.CNhs11115.751-24B92.81
liver, neonate N20.CNhs11220.823-25A31.01
liver, neonate N25.CNhs11198.1368-26H10.54
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B14.62
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.68
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A61.68
lung, embryo E18.CNhs10583.1287-20I61.43
lung, neonate N00.CNhs11224.640-42C63.32
lung, neonate N06.CNhs11212.683-20E51.26
lung, neonate N07.CNhs11111.715-19A31.55
lung, neonate N10.CNhs11219.750-23E61.91
lung, neonate N20.CNhs11109.822-18A43.44
lung, neonate N25.CNhs11119.1359-25C73.63
lung, neonate N30.CNhs11133.1394-42H23.18
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A19.05
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A17.61
mammary gland, adult lactating day02.CNhs10480.595-22B62.46
mammary gland, adult pregnant day19.CNhs10476.588-5H23.59
medulla oblongata, adult.CNhs10477.17-12C20.32
medulla oblongata, neonate N30.CNhs11200.1396-42A30.47
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.31
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.26
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.95
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.17
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I90.64
ovary, adult.CNhs10507.91-2I71.85
ovary, embryo E18.CNhs11040.505-44H70.53
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G63.13
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.57
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.92
pancreas, neonate N00.CNhs11105.645-26G91.55
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B61.58
pancreas, neonate N25.CNhs11094.1555-45E22.11
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C70.26
pituitary gland, embryo E14.CNhs11037.398-44A50.64
pituitary gland, embryo E15.CNhs10592.427-16B90.35
pituitary gland, embryo E16.CNhs11036.449-43F60.36
pituitary gland, embryo E17.CNhs11039.1265-44F50.33
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.70
placenta, adult pregnant day17.CNhs10464.577-18G31.91
prostate, adult.CNhs10470.859-1F81.76
skin, adult.CNhs10492.30-1C32.97
skin, neonate N00.CNhs11124.650-25G41.94
skin, neonate N03.CNhs11215.662-22H30.78
skin, neonate N06.CNhs11097.693-20I51.07
skin, neonate N10.CNhs11108.762-6C40.49
small intestine, neonate N16.CNhs11114.790-21I13.21
spinal cord, adult.CNhs10505.24-13C90.37
spleen, adult.CNhs10465.25-2G24.78
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F22.04
spleen, neonate N10.CNhs11116.752-24D12.83
spleen, neonate N20.CNhs11112.824-19H11.91
spleen, neonate N25.CNhs11099.1354-25G33.20
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C612.41
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C99.52
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D311.19
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.54
stomach, embryo E17.CNhs11006.1035-18D50.84
stomach, embryo E18.CNhs10999.1286-20C60.66
stomach, neonate N03.CNhs11193.1340-24B80.40
stomach, neonate N07.CNhs11210.718-18A90.91
stomach, neonate N25.CNhs11104.1355-25E41.57
stomach, neonate N30.CNhs11134.1386-42I10.52
submandibular gland, adult.CNhs10469.59-29C14.35
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.45
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.58
testis, embryo E17.CNhs11029.486-18I50.39
testis, embryo E18.CNhs11027.503-18G50.84
testis, neonate N00.CNhs11189.1300-22B70.70
testis, neonate N07.CNhs11222.726-26I40.39
testis, neonate N10.CNhs11204.763-44D90.42
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B54.74
thymus, embryo E14.CNhs11041.402-44I41.42
thymus, embryo E15.CNhs11005.430-45I20.92
thymus, embryo E16.CNhs11002.456-26C52.73
thymus, embryo E17.CNhs10581.478-18C12.15
thymus, embryo E18.CNhs10595.1273-19G40.99
thymus, neonate N02.CNhs11181.1541-43F81.32
thymus, neonate N03.CNhs11137.2104-43C72.81
thymus, neonate N06.CNhs11197.681-26C41.31
thymus, neonate N07.CNhs11211.713-19D31.52
thymus, neonate N10.CNhs11194.748-24E42.52
thymus, neonate N20.CNhs11186.820-7A22.92
thymus, neonate N25.CNhs11125.1362-25G71.64
thymus, neonate N30.CNhs11132.1393-42G22.92
tongue, adult.CNhs10499.32-1B40.91
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.67
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.34
urinary bladder, adult.CNhs10481.879-12E42.32
uterus, adult pregnant day19.CNhs10497.590-15F52.06
uterus, adult.CNhs10509.92-27E55.31
vagina, adult.CNhs10502.89-27D51.93
vesicular gland, adult.CNhs10491.51-27F81.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.34
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B10.63
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.86
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.46
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.55
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.05
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.54
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.24
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.07
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.62
whole body, embryo E17.5.CNhs10513.490-9F90.58
whole body, embryo E17.CNhs10517.475-3I50.50
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C61.72
whole body, neonate N06.CNhs10515.692-21D11.32
whole body, neonate N10.CNhs10518.761-6B43.01





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
hemolymphoid system1.45e-1248
immune system1.45e-1248
hematopoietic system2.52e-1245
blood island2.52e-1245
lateral plate mesoderm4.77e-1187
mesoderm1.51e-10120
mesoderm-derived structure1.51e-10120
presumptive mesoderm1.51e-10120
mixed endoderm/mesoderm-derived structure5.95e-1035
respiratory system7.62e-1042
respiratory tract2.53e-0941
musculoskeletal system8.55e-0932
hemopoietic organ1.22e-0829
immune organ1.22e-0829
segment of respiratory tract5.53e-0827
foregut7.65e-0880
gland of gut1.09e-0724
thymus3.75e-0723
neck3.75e-0723
respiratory system epithelium3.75e-0723
hemolymphoid system gland3.75e-0723
pharyngeal epithelium3.75e-0723
thymic region3.75e-0723
pharyngeal gland3.75e-0723
entire pharyngeal arch endoderm3.75e-0723
thymus primordium3.75e-0723
early pharyngeal endoderm3.75e-0723
connective tissue3.93e-0746
unilaminar epithelium5.97e-0766
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