FFCP PHASE1:Mm9::chr2:98503877..98503897,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=897|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr2:98503877..98503897,+|id=chr2:98503877..98503897,+|ontology_enrichment_celltype=CL:0000553!2.54e-09!6;CL:0000556!2.54e-09!6;CL:0000050!1.06e-07!9|ontology_enrichment_celltype_v019_2=CL:0000553,4.12e-38,6;CL:0000556,4.12e-38,6;CL:0000050,2.30e-25,9;CL:0002027,6.21e-20,3;CL:0002006,6.21e-20,3;CL:0002024,6.21e-20,3;CL:0000839,1.70e-17,13;CL:0000763,3.62e-14,16;CL:0000049,6.96e-12,19;CL:0002320,2.84e-10,46;CL:0000134,2.84e-10,46;CL:0002031,5.95e-09,25;CL:0000219,1.32e-08,54;CL:0000213,1.53e-07,1;CL:0002078,1.53e-07,1;CL:0000115,1.53e-07,1;CL:0002262,1.53e-07,1;CL:1000398,1.53e-07,1;CL:0000057,2.05e-07,1;CL:0000632,2.05e-07,1;CL:0000988,6.52e-07,32;CL:0002032,6.52e-07,32;CL:0000037,6.52e-07,32;CL:0000837,6.52e-07,32|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002021!4.60e-08!10;UBERON:0000411!4.60e-08!10;UBERON:0001950!4.60e-08!10|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.62e-14,16;UBERON:0001474,7.37e-14,22;UBERON:0004765,7.37e-14,22;UBERON:0001434,7.37e-14,22;UBERON:0002384,2.84e-10,46;UBERON:0002204,2.37e-09,32;UBERON:0002394,1.53e-07,1;UBERON:0001281,1.53e-07,1;UBERON:0000353,1.53e-07,1;UBERON:0003497,1.53e-07,1;UBERON:0003909,1.53e-07,1;UBERON:0003928,1.53e-07,1;UBERON:0003835,1.53e-07,1;UBERON:0003513,1.53e-07,1;UBERON:0001280,1.53e-07,1;UBERON:0004647,1.53e-07,1;UBERON:0002294,1.53e-07,1;UBERON:0001173,1.53e-07,1;UBERON:0004912,1.53e-07,1;UBERON:0005171,1.53e-07,1|phase1_expression=0,0,0,0,0,0,0,0.516493293766305,0.140788722151667,0.234064526321993,0.171217968225505,0,0.171200729931206,0.174840804837995,1.33243904726265,18.4252493324742,8.39474253753776,5.52058789376916,3.56497527374921,7.63901373236454,0,0,0,0,0,0,0,0,0,0,0,0.635030673459631,0,0,0,0,0,0,0,0,0,0,0.485510353031154,0.125896817975577,0.101376931219515,0,0,0,0,0,0,0,0,0,0,0,0.286533439938757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37863096666592,0.226714680320357,2.89864488701678,2.58127163094416,0,0,0,0,0,0,0.779358013808606,4.94675404314476,0,0,0,0,0,0,0,0.5709193985953,0,0,0,0,0,0,0,0,0,0,0,0,0.441683036920787,11.6370060752453,0,0,0,0,0.11981512450592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0680364991513279,0.12811372028485,0.0937017245597288,0,0,0,0,0,0,0.348252166522167,0,0,0,0.51469581422943,0,0,0,0,0,0,0.154267112887378,0.232533944750408,0,0.583826711835847,0,0.656669856316381,0,0,0,0,0,0,0.330418782983798,0,0,0,0,0,0,0,0,0,0,0.198956472041151,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252578877947112,0,0,0,0,0,0.169745085775188,0,0,0,0,0.157635144106191,0.221464689648775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.566153061577665,0,0,0,0.321321316421807,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0.98931751764888,0,0,0,0,0,0,0,0,0.185194527369712,0,0,0,0,0.139951452323658,0.138199973804424,2.86401185404534,0,0,0,0.209088296014469,0,0.269728692769641,0.0826534557253359,0,0,0.621339313086926,0,0,0,0,0.129159823477731,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15241361331,0,0.0974578807397524,0,0,0.226730383615211,0,0.179427713218951,0,0,0,0,0,0,1.12950368523413,0.920650473014354,0.572895513439397,8.07709957015332,0,2.2661816921691,0.675022500231806,0,0.453142408984205,0.51776031175182,0.207574695168353,0,0,0.243106717068294,0,0,0.222246727801615,0,0,0,0,0,0,0.0640251524048693,0.114870937911227,0,0,0,0,0.147198920134397,0,0,0,0,0,0,0,0,0,0.561142271657738,0,0,0,0,0,0,0.233931608445408,0,0.57386499620653,0.220591419119515,0|short_description=p@chr2:98503877..98503897,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=897 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr2:98503877..98503897,+ | |||
|description=CAGE_peak_at_chr2:98503877..98503897,+ | |||
|id=chr2:98503877..98503897,+ | |||
|ontology_enrichment_celltype=CL:0000553!2.54e-09!6;CL:0000556!2.54e-09!6;CL:0000050!1.06e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000553,4.12e-38,6;CL:0000556,4.12e-38,6;CL:0000050,2.30e-25,9;CL:0002027,6.21e-20,3;CL:0002006,6.21e-20,3;CL:0002024,6.21e-20,3;CL:0000839,1.70e-17,13;CL:0000763,3.62e-14,16;CL:0000049,6.96e-12,19;CL:0002320,2.84e-10,46;CL:0000134,2.84e-10,46;CL:0002031,5.95e-09,25;CL:0000219,1.32e-08,54;CL:0000213,1.53e-07,1;CL:0002078,1.53e-07,1;CL:0000115,1.53e-07,1;CL:0002262,1.53e-07,1;CL:1000398,1.53e-07,1;CL:0000057,2.05e-07,1;CL:0000632,2.05e-07,1;CL:0000988,6.52e-07,32;CL:0002032,6.52e-07,32;CL:0000037,6.52e-07,32;CL:0000837,6.52e-07,32 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002021!4.60e-08!10;UBERON:0000411!4.60e-08!10;UBERON:0001950!4.60e-08!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.62e-14,16;UBERON:0001474,7.37e-14,22;UBERON:0004765,7.37e-14,22;UBERON:0001434,7.37e-14,22;UBERON:0002384,2.84e-10,46;UBERON:0002204,2.37e-09,32;UBERON:0002394,1.53e-07,1;UBERON:0001281,1.53e-07,1;UBERON:0000353,1.53e-07,1;UBERON:0003497,1.53e-07,1;UBERON:0003909,1.53e-07,1;UBERON:0003928,1.53e-07,1;UBERON:0003835,1.53e-07,1;UBERON:0003513,1.53e-07,1;UBERON:0001280,1.53e-07,1;UBERON:0004647,1.53e-07,1;UBERON:0002294,1.53e-07,1;UBERON:0001173,1.53e-07,1;UBERON:0004912,1.53e-07,1;UBERON:0005171,1.53e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0.516493293766305,0.140788722151667,0.234064526321993,0.171217968225505,0,0.171200729931206,0.174840804837995,1.33243904726265,18.4252493324742,8.39474253753776,5.52058789376916,3.56497527374921,7.63901373236454,0,0,0,0,0,0,0,0,0,0,0,0.635030673459631,0,0,0,0,0,0,0,0,0,0,0.485510353031154,0.125896817975577,0.101376931219515,0,0,0,0,0,0,0,0,0,0,0,0.286533439938757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37863096666592,0.226714680320357,2.89864488701678,2.58127163094416,0,0,0,0,0,0,0.779358013808606,4.94675404314476,0,0,0,0,0,0,0,0.5709193985953,0,0,0,0,0,0,0,0,0,0,0,0,0.441683036920787,11.6370060752453,0,0,0,0,0.11981512450592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0680364991513279,0.12811372028485,0.0937017245597288,0,0,0,0,0,0,0.348252166522167,0,0,0,0.51469581422943,0,0,0,0,0,0,0.154267112887378,0.232533944750408,0,0.583826711835847,0,0.656669856316381,0,0,0,0,0,0,0.330418782983798,0,0,0,0,0,0,0,0,0,0,0.198956472041151,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252578877947112,0,0,0,0,0,0.169745085775188,0,0,0,0,0.157635144106191,0.221464689648775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.566153061577665,0,0,0,0.321321316421807,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0.98931751764888,0,0,0,0,0,0,0,0,0.185194527369712,0,0,0,0,0.139951452323658,0.138199973804424,2.86401185404534,0,0,0,0.209088296014469,0,0.269728692769641,0.0826534557253359,0,0,0.621339313086926,0,0,0,0,0.129159823477731,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15241361331,0,0.0974578807397524,0,0,0.226730383615211,0,0.179427713218951,0,0,0,0,0,0,1.12950368523413,0.920650473014354,0.572895513439397,8.07709957015332,0,2.2661816921691,0.675022500231806,0,0.453142408984205,0.51776031175182,0.207574695168353,0,0,0.243106717068294,0,0,0.222246727801615,0,0,0,0,0,0,0.0640251524048693,0.114870937911227,0,0,0,0,0.147198920134397,0,0,0,0,0,0,0,0,0,0.561142271657738,0,0,0,0,0,0,0.233931608445408,0,0.57386499620653,0.220591419119515,0 | |||
|short_description=p@chr2:98503877..98503897,+ | |||
}} |
Latest revision as of 17:10, 5 August 2015
Short description: | p@chr2:98503877..98503897, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:98503877..98503897, + |
Coexpression cluster: | MCL_coexpression_mm9:897 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 4.12e-38 | 6 |
megakaryocyte | 4.12e-38 | 6 |
megakaryocyte-erythroid progenitor cell | 2.30e-25 | 9 |
CD9-positive, CD41-positive megakaryocyte cell | 6.21e-20 | 3 |
Kit-positive, CD34-negative megakaryocyte erythroid progenitor cell | 6.21e-20 | 3 |
Kit-positive megakaryocyte progenitor cell | 6.21e-20 | 3 |
myeloid lineage restricted progenitor cell | 1.70e-17 | 13 |
myeloid cell | 3.62e-14 | 16 |
common myeloid progenitor | 6.96e-12 | 19 |
connective tissue cell | 2.84e-10 | 46 |
mesenchymal cell | 2.84e-10 | 46 |
hematopoietic lineage restricted progenitor cell | 5.95e-09 | 25 |
motile cell | 1.32e-08 | 54 |
lining cell | 1.53e-07 | 1 |
meso-epithelial cell | 1.53e-07 | 1 |
endothelial cell | 1.53e-07 | 1 |
endothelial cell of sinusoid | 1.53e-07 | 1 |
endothelial cell of hepatic sinusoid | 1.53e-07 | 1 |
fibroblast | 2.05e-07 | 1 |
hepatic stellate cell | 2.05e-07 | 1 |
hematopoietic cell | 6.52e-07 | 32 |
hematopoietic oligopotent progenitor cell | 6.52e-07 | 32 |
hematopoietic stem cell | 6.52e-07 | 32 |
hematopoietic multipotent progenitor cell | 6.52e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.62e-14 | 16 |
bone element | 7.37e-14 | 22 |
skeletal element | 7.37e-14 | 22 |
skeletal system | 7.37e-14 | 22 |
connective tissue | 2.84e-10 | 46 |
musculoskeletal system | 2.37e-09 | 32 |
bile duct | 1.53e-07 | 1 |
hepatic sinusoid | 1.53e-07 | 1 |
parenchyma | 1.53e-07 | 1 |
abdomen blood vessel | 1.53e-07 | 1 |
sinusoid | 1.53e-07 | 1 |
digestive system duct | 1.53e-07 | 1 |
abdominal segment blood vessel | 1.53e-07 | 1 |
trunk blood vessel | 1.53e-07 | 1 |
liver parenchyma | 1.53e-07 | 1 |
liver lobule | 1.53e-07 | 1 |
biliary system | 1.53e-07 | 1 |
biliary tree | 1.53e-07 | 1 |
biliary bud | 1.53e-07 | 1 |
hepatic duct | 1.53e-07 | 1 |