FFCP PHASE1:Mm9::chr18:5594197..5594228,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=21417|HGNC=|MCL_coexpression_id=170|UniProt=E9PX55,A4QPD1|association_with_transcript=0bp_to_ENSMUST00000162892,uc008dyz.1_5end|description=CAGE_peak_7_at_Zeb1_5end|id=chr18:5594197..5594228,+|ontology_enrichment_celltype=CL:0000791!6.11e-11!9;CL:0000789!6.11e-11!9;CL:0002420!6.11e-11!9;CL:0002419!6.11e-11!9;CL:0000790!6.11e-11!9;CL:0000624!8.37e-10!8;CL:0000838!8.85e-09!12;CL:0000084!2.20e-08!11;CL:0000827!2.20e-08!11;CL:0000542!7.53e-08!13;CL:0000051!7.53e-08!13;CL:0000893!1.43e-07!6;CL:0002489!1.43e-07!6;CL:0000898!1.43e-07!6;CL:0000809!1.43e-07!6;CL:0000810!1.43e-07!6;CL:0000895!1.43e-07!6;CL:0000808!1.43e-07!6;CL:0000894!1.43e-07!6;CL:0000806!1.43e-07!6;CL:0000807!1.43e-07!6;CL:0000805!1.43e-07!6;CL:0002425!1.43e-07!6;CL:0002436!1.43e-07!6;CL:0002427!1.43e-07!6;CL:0002428!1.43e-07!6;CL:0002429!1.43e-07!6;CL:0002433!1.43e-07!6;CL:0002431!1.43e-07!6;CL:0002432!1.43e-07!6|ontology_enrichment_celltype_v019_2=CL:0000791,1.56e-37,9;CL:0000789,1.56e-37,9;CL:0002420,1.56e-37,9;CL:0002419,1.56e-37,9;CL:0000790,1.56e-37,9;CL:0000624,4.88e-31,8;CL:0000084,1.18e-30,11;CL:0000827,1.18e-30,11;CL:0000838,4.51e-28,12;CL:0000542,6.92e-26,13;CL:0000051,6.92e-26,13;CL:0000738,1.05e-19,17;CL:0002087,1.05e-19,17;CL:0000893,1.07e-18,6;CL:0002489,1.07e-18,6;CL:0000898,1.07e-18,6;CL:0000809,1.07e-18,6;CL:0000810,1.07e-18,6;CL:0000895,1.07e-18,6;CL:0000808,1.07e-18,6;CL:0000894,1.07e-18,6;CL:0000806,1.07e-18,6;CL:0000807,1.07e-18,6;CL:0000805,1.07e-18,6;CL:0002425,1.07e-18,6;CL:0002436,1.07e-18,6;CL:0002427,1.07e-18,6;CL:0002428,1.07e-18,6;CL:0002429,1.07e-18,6;CL:0002433,1.07e-18,6;CL:0002431,1.07e-18,6;CL:0002432,1.07e-18,6;CL:0002031,2.96e-13,25;CL:0000988,3.05e-10,32;CL:0002032,3.05e-10,32;CL:0000037,3.05e-10,32;CL:0000837,3.05e-10,32;CL:0000625,1.56e-08,1;CL:0000815,2.16e-08,1;CL:0000792,2.16e-08,1;CL:0002320,5.95e-07,46;CL:0000134,5.95e-07,46|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!1.68e-11!52;UBERON:0005068!1.68e-11!52;UBERON:0006241!1.68e-11!52;UBERON:0007135!1.68e-11!52;UBERON:0000955!1.05e-09!50;UBERON:0006238!1.05e-09!50;UBERON:0002616!4.71e-09!49;UBERON:0003080!5.55e-09!40;UBERON:0000073!1.44e-08!75;UBERON:0001016!1.44e-08!75;UBERON:0002780!2.63e-08!39;UBERON:0001890!2.63e-08!39;UBERON:0006240!2.63e-08!39;UBERON:0007811!6.38e-08!86;UBERON:0001017!6.98e-08!73;UBERON:0005743!6.98e-08!73;UBERON:0000477!1.26e-07!154;UBERON:0000153!1.52e-07!94;UBERON:0002346!1.59e-07!71;UBERON:0003075!1.59e-07!71;UBERON:0007284!1.59e-07!71;UBERON:0004111!5.09e-07!122;UBERON:0000033!5.61e-07!63;UBERON:0000025!6.79e-07!114|ontology_enrichment_uberon_v019_2=UBERON:0002021,9.22e-11,10;UBERON:0000411,9.22e-11,10;UBERON:0001950,9.22e-11,10;UBERON:0002384,5.95e-07,46|phase1_expression=0.160148847104794,0,0,0,0,0,0,9.55512593467664,6.75785866328,6.78787126333781,0.68487187290202,0.398860794976682,6.50562773738582,6.8187913886818,0,0.202475267389826,0,0.157731082679119,0.274228867211478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.101376931219515,0,0,0,0,0,0,0,0.167782606057736,15.9579671242496,24.5348473373999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0.220868540951614,0.122490799214954,0.191690942036473,0,0,0.127687338085188,0,0.131886287730194,0.182975287204819,0,0.558365998002762,0.56276261003168,0,0.294628585473668,0.142371680799103,0,0.075726193333184,0.226714680320357,0.869593466105033,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.517875767294343,0,0,0,0,0.301445281105245,0.117588707135705,0,0,0,0,0,0,0,0,0.585561594023094,0.41889341362691,0,0,0,0,0.748953197024114,0.457500602818626,0.376963056338593,0.347648640384553,0.767146371990992,0.20778804455956,0.811206315338788,0.101839363850316,0,0,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0.278047249225598,0,0,0.199034266818493,0,0,0,0,0.234526059981096,0.180062061461015,0,0.196764231747404,0,0,0,0.116765342367169,0,0.32833492815819,0.324275238183423,0.146199987425332,0.219550115291051,0.268412837520744,0.210289948564127,0,0,0,0,0,0,0,0,0.190225626112559,0,0,0,0,0.19496408711912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43768206527355,0,0,0,0,0,0,0,0,0,0,0,0.238043640886014,0,0,0,0,0.327726629431476,0,0.144649058581512,0,0,0,0,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0.292255857911312,0,0.642642632843614,0,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,2.04263763452273,0,0,0,0.354680467284547,0.356737635204141,0.987294123612726,0.913394847343798,0,0,0.220528398054962,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0.339956859987711,0.559805809294632,0.276399947608848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234714477291508,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0.0974578807397524,0.192423683280659,0,0,0,0,0,0,0.375364950902364,0,0.214368379079066,0,1.12950368523413,0,0,0.859265911718438,0,0.755393897389701,1.35004500046361,0,1.81256963593682,1.55328093525546,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0,0.0936415074698824,0.192075457214608,0.0574354689556133,0,0,0.192909220463705,0,0.147198920134397,0,0,0,0,0.0941093804153306,0.0846146078916765,0.182927972872773,0.526139422875686,0.135804113845862,0,0,0,0,0.464810523557898,0,0,0.233931608445408,0,0.382576664137687,0.220591419119515,0|short_description=p7@Zeb1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:21417 | |||
|HGNC= | |||
|MCL_coexpression_id=170 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:E9PX55,uniprot:A4QPD1 | |||
|association_with_transcript=0bp_to_ENSMUST00000162892,uc008dyz.1_5end | |||
|cluster_id=chr18:5594197..5594228,+ | |||
|description=CAGE_peak_7_at_Zeb1_5end | |||
|id=chr18:5594197..5594228,+ | |||
|ontology_enrichment_celltype=CL:0000791!6.11e-11!9;CL:0000789!6.11e-11!9;CL:0002420!6.11e-11!9;CL:0002419!6.11e-11!9;CL:0000790!6.11e-11!9;CL:0000624!8.37e-10!8;CL:0000838!8.85e-09!12;CL:0000084!2.20e-08!11;CL:0000827!2.20e-08!11;CL:0000542!7.53e-08!13;CL:0000051!7.53e-08!13;CL:0000893!1.43e-07!6;CL:0002489!1.43e-07!6;CL:0000898!1.43e-07!6;CL:0000809!1.43e-07!6;CL:0000810!1.43e-07!6;CL:0000895!1.43e-07!6;CL:0000808!1.43e-07!6;CL:0000894!1.43e-07!6;CL:0000806!1.43e-07!6;CL:0000807!1.43e-07!6;CL:0000805!1.43e-07!6;CL:0002425!1.43e-07!6;CL:0002436!1.43e-07!6;CL:0002427!1.43e-07!6;CL:0002428!1.43e-07!6;CL:0002429!1.43e-07!6;CL:0002433!1.43e-07!6;CL:0002431!1.43e-07!6;CL:0002432!1.43e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.56e-37,9;CL:0000789,1.56e-37,9;CL:0002420,1.56e-37,9;CL:0002419,1.56e-37,9;CL:0000790,1.56e-37,9;CL:0000624,4.88e-31,8;CL:0000084,1.18e-30,11;CL:0000827,1.18e-30,11;CL:0000838,4.51e-28,12;CL:0000542,6.92e-26,13;CL:0000051,6.92e-26,13;CL:0000738,1.05e-19,17;CL:0002087,1.05e-19,17;CL:0000893,1.07e-18,6;CL:0002489,1.07e-18,6;CL:0000898,1.07e-18,6;CL:0000809,1.07e-18,6;CL:0000810,1.07e-18,6;CL:0000895,1.07e-18,6;CL:0000808,1.07e-18,6;CL:0000894,1.07e-18,6;CL:0000806,1.07e-18,6;CL:0000807,1.07e-18,6;CL:0000805,1.07e-18,6;CL:0002425,1.07e-18,6;CL:0002436,1.07e-18,6;CL:0002427,1.07e-18,6;CL:0002428,1.07e-18,6;CL:0002429,1.07e-18,6;CL:0002433,1.07e-18,6;CL:0002431,1.07e-18,6;CL:0002432,1.07e-18,6;CL:0002031,2.96e-13,25;CL:0000988,3.05e-10,32;CL:0002032,3.05e-10,32;CL:0000037,3.05e-10,32;CL:0000837,3.05e-10,32;CL:0000625,1.56e-08,1;CL:0000815,2.16e-08,1;CL:0000792,2.16e-08,1;CL:0002320,5.95e-07,46;CL:0000134,5.95e-07,46 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.68e-11!52;UBERON:0005068!1.68e-11!52;UBERON:0006241!1.68e-11!52;UBERON:0007135!1.68e-11!52;UBERON:0000955!1.05e-09!50;UBERON:0006238!1.05e-09!50;UBERON:0002616!4.71e-09!49;UBERON:0003080!5.55e-09!40;UBERON:0000073!1.44e-08!75;UBERON:0001016!1.44e-08!75;UBERON:0002780!2.63e-08!39;UBERON:0001890!2.63e-08!39;UBERON:0006240!2.63e-08!39;UBERON:0007811!6.38e-08!86;UBERON:0001017!6.98e-08!73;UBERON:0005743!6.98e-08!73;UBERON:0000477!1.26e-07!154;UBERON:0000153!1.52e-07!94;UBERON:0002346!1.59e-07!71;UBERON:0003075!1.59e-07!71;UBERON:0007284!1.59e-07!71;UBERON:0004111!5.09e-07!122;UBERON:0000033!5.61e-07!63;UBERON:0000025!6.79e-07!114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,9.22e-11,10;UBERON:0000411,9.22e-11,10;UBERON:0001950,9.22e-11,10;UBERON:0002384,5.95e-07,46 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,9.55512593467664,6.75785866328,6.78787126333781,0.68487187290202,0.398860794976682,6.50562773738582,6.8187913886818,0,0.202475267389826,0,0.157731082679119,0.274228867211478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.101376931219515,0,0,0,0,0,0,0,0.167782606057736,15.9579671242496,24.5348473373999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0.220868540951614,0.122490799214954,0.191690942036473,0,0,0.127687338085188,0,0.131886287730194,0.182975287204819,0,0.558365998002762,0.56276261003168,0,0.294628585473668,0.142371680799103,0,0.075726193333184,0.226714680320357,0.869593466105033,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.517875767294343,0,0,0,0,0.301445281105245,0.117588707135705,0,0,0,0,0,0,0,0,0.585561594023094,0.41889341362691,0,0,0,0,0.748953197024114,0.457500602818626,0.376963056338593,0.347648640384553,0.767146371990992,0.20778804455956,0.811206315338788,0.101839363850316,0,0,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0.278047249225598,0,0,0.199034266818493,0,0,0,0,0.234526059981096,0.180062061461015,0,0.196764231747404,0,0,0,0.116765342367169,0,0.32833492815819,0.324275238183423,0.146199987425332,0.219550115291051,0.268412837520744,0.210289948564127,0,0,0,0,0,0,0,0,0.190225626112559,0,0,0,0,0.19496408711912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43768206527355,0,0,0,0,0,0,0,0,0,0,0,0.238043640886014,0,0,0,0,0.327726629431476,0,0.144649058581512,0,0,0,0,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0.292255857911312,0,0.642642632843614,0,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,2.04263763452273,0,0,0,0.354680467284547,0.356737635204141,0.987294123612726,0.913394847343798,0,0,0.220528398054962,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0.339956859987711,0.559805809294632,0.276399947608848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234714477291508,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0.0974578807397524,0.192423683280659,0,0,0,0,0,0,0.375364950902364,0,0.214368379079066,0,1.12950368523413,0,0,0.859265911718438,0,0.755393897389701,1.35004500046361,0,1.81256963593682,1.55328093525546,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0,0.0936415074698824,0.192075457214608,0.0574354689556133,0,0,0.192909220463705,0,0.147198920134397,0,0,0,0,0.0941093804153306,0.0846146078916765,0.182927972872773,0.526139422875686,0.135804113845862,0,0,0,0,0.464810523557898,0,0,0.233931608445408,0,0.382576664137687,0.220591419119515,0 | |||
|short_description=p7@Zeb1 | |||
}} |
Revision as of 21:32, 5 August 2015
Short description: | p7@Zeb1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Zeb1_5end |
Coexpression cluster: | MCL_coexpression_mm9:170 |
Association with transcript: | 0bp_to_ENSMUST00000162892, uc008dyz.1_5end |
EntrezGene: | 21417 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
occipital lobe | 9.22e-11 | 10 |
visual cortex | 9.22e-11 | 10 |
neocortex | 9.22e-11 | 10 |
connective tissue | 5.95e-07 | 46 |