FFCP PHASE1:Mm9::chr3:29366821..29366826,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=3405|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr3:29366821..29366826,+|id=chr3:29366821..29366826,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003056!2.73e-14!49;UBERON:0002021!2.71e-13!10;UBERON:0000411!2.71e-13!10;UBERON:0001950!2.71e-13!10;UBERON:0000033!3.03e-13!63;UBERON:0002346!2.36e-12!71;UBERON:0003075!2.36e-12!71;UBERON:0007284!2.36e-12!71;UBERON:0002619!1.20e-10!17;UBERON:0000956!7.94e-10!21;UBERON:0001869!7.94e-10!21;UBERON:0000203!7.94e-10!21;UBERON:0002616!8.47e-10!49;UBERON:0000955!1.65e-09!50;UBERON:0006238!1.65e-09!50;UBERON:0001049!4.02e-09!52;UBERON:0005068!4.02e-09!52;UBERON:0006241!4.02e-09!52;UBERON:0007135!4.02e-09!52;UBERON:0003080!4.47e-09!40;UBERON:0002780!4.13e-08!39;UBERON:0001890!4.13e-08!39;UBERON:0006240!4.13e-08!39;UBERON:0004121!4.13e-08!102;UBERON:0000924!4.13e-08!102;UBERON:0006601!4.13e-08!102;UBERON:0007811!4.93e-08!86;UBERON:0002791!1.39e-07!29;UBERON:0003528!1.39e-07!29;UBERON:0001893!1.39e-07!29;UBERON:0001017!1.67e-07!73;UBERON:0005743!1.67e-07!73;UBERON:0000970!3.19e-07!9;UBERON:0000019!3.19e-07!9;UBERON:0000047!3.19e-07!9;UBERON:0004088!3.19e-07!9;UBERON:0002104!3.19e-07!9;UBERON:0001456!3.19e-07!9;UBERON:0003072!3.19e-07!9;UBERON:0003071!3.19e-07!9;UBERON:0004128!3.19e-07!9;UBERON:0000073!3.65e-07!75;UBERON:0001016!3.65e-07!75;UBERON:0002020!3.99e-07!34;UBERON:0000153!7.63e-07!94|ontology_enrichment_uberon_v019_2=UBERON:0002021,2.51e-39,10;UBERON:0000411,2.51e-39,10;UBERON:0001950,2.51e-39,10;UBERON:0002619,2.95e-23,17;UBERON:0000956,7.19e-19,21;UBERON:0001869,7.19e-19,21;UBERON:0000203,7.19e-19,21;UBERON:0003528,1.05e-13,29;UBERON:0002791,1.05e-13,29;UBERON:0001893,1.05e-13,29;UBERON:0002020,1.05e-11,34;UBERON:0002780,3.26e-10,39;UBERON:0001890,3.26e-10,39;UBERON:0006240,3.26e-10,39;UBERON:0003080,5.85e-10,40;UBERON:0002616,1.16e-08,46;UBERON:0000955,1.77e-08,47;UBERON:0006238,1.77e-08,47;UBERON:0003056,3.93e-08,49;UBERON:0001049,1.16e-07,52;UBERON:0005068,1.16e-07,52;UBERON:0006241,1.16e-07,52;UBERON:0007135,1.16e-07,52;UBERON:0000073,2.24e-07,54|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0.153606533256243,0,0,0,0,0,0,0,0.142371680799103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299581278809645,0,0.125654352112864,0.173824320192276,0,0,0.324482526135515,0,0,0,0,0.390361328888111,0.459804208866946,0.360124259610698,0,0.0680364991513279,0.2562274405697,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.407302655690628,0,0,0.0632365371242573,0,0.156998727841375,0,0,0,0,0,0,0.241177159752417,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0.938760993154008,0.167506257441816,0,0,0.945810864637146,1.10732344824387,2.23236676120482,0,0,0,0,0,0,0,0.160550589987792,0,0,0,0,0,0.215423397732799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214337035031592,0,0.178368817602071,0,0,0,0,0,0,0,0,0,0,0,0.556275906031529,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.95326289831947,1.38097570952153,2.86447756719698,1.54667864109319,1.37016503954128,0,0,0.900642406448441,0.453142408984205,1.03552062350364,0,0.399024873401031,0,0,0,0,0,0,0,0.252697211763798,0,0,0,0.0640251524048693,0.0574354689556133,0,0,0,0,0,0,0.354951612318675,0,0.145346416632329,0.0941093804153306,0.0846146078916765,0.182927972872773,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr3:29366821..29366826,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=3405 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr3:29366821..29366826,+ | |||
|description=CAGE_peak_at_chr3:29366821..29366826,+ | |||
|id=chr3:29366821..29366826,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003056!2.73e-14!49;UBERON:0002021!2.71e-13!10;UBERON:0000411!2.71e-13!10;UBERON:0001950!2.71e-13!10;UBERON:0000033!3.03e-13!63;UBERON:0002346!2.36e-12!71;UBERON:0003075!2.36e-12!71;UBERON:0007284!2.36e-12!71;UBERON:0002619!1.20e-10!17;UBERON:0000956!7.94e-10!21;UBERON:0001869!7.94e-10!21;UBERON:0000203!7.94e-10!21;UBERON:0002616!8.47e-10!49;UBERON:0000955!1.65e-09!50;UBERON:0006238!1.65e-09!50;UBERON:0001049!4.02e-09!52;UBERON:0005068!4.02e-09!52;UBERON:0006241!4.02e-09!52;UBERON:0007135!4.02e-09!52;UBERON:0003080!4.47e-09!40;UBERON:0002780!4.13e-08!39;UBERON:0001890!4.13e-08!39;UBERON:0006240!4.13e-08!39;UBERON:0004121!4.13e-08!102;UBERON:0000924!4.13e-08!102;UBERON:0006601!4.13e-08!102;UBERON:0007811!4.93e-08!86;UBERON:0002791!1.39e-07!29;UBERON:0003528!1.39e-07!29;UBERON:0001893!1.39e-07!29;UBERON:0001017!1.67e-07!73;UBERON:0005743!1.67e-07!73;UBERON:0000970!3.19e-07!9;UBERON:0000019!3.19e-07!9;UBERON:0000047!3.19e-07!9;UBERON:0004088!3.19e-07!9;UBERON:0002104!3.19e-07!9;UBERON:0001456!3.19e-07!9;UBERON:0003072!3.19e-07!9;UBERON:0003071!3.19e-07!9;UBERON:0004128!3.19e-07!9;UBERON:0000073!3.65e-07!75;UBERON:0001016!3.65e-07!75;UBERON:0002020!3.99e-07!34;UBERON:0000153!7.63e-07!94 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,2.51e-39,10;UBERON:0000411,2.51e-39,10;UBERON:0001950,2.51e-39,10;UBERON:0002619,2.95e-23,17;UBERON:0000956,7.19e-19,21;UBERON:0001869,7.19e-19,21;UBERON:0000203,7.19e-19,21;UBERON:0003528,1.05e-13,29;UBERON:0002791,1.05e-13,29;UBERON:0001893,1.05e-13,29;UBERON:0002020,1.05e-11,34;UBERON:0002780,3.26e-10,39;UBERON:0001890,3.26e-10,39;UBERON:0006240,3.26e-10,39;UBERON:0003080,5.85e-10,40;UBERON:0002616,1.16e-08,46;UBERON:0000955,1.77e-08,47;UBERON:0006238,1.77e-08,47;UBERON:0003056,3.93e-08,49;UBERON:0001049,1.16e-07,52;UBERON:0005068,1.16e-07,52;UBERON:0006241,1.16e-07,52;UBERON:0007135,1.16e-07,52;UBERON:0000073,2.24e-07,54 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0.153606533256243,0,0,0,0,0,0,0,0.142371680799103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299581278809645,0,0.125654352112864,0.173824320192276,0,0,0.324482526135515,0,0,0,0,0.390361328888111,0.459804208866946,0.360124259610698,0,0.0680364991513279,0.2562274405697,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.407302655690628,0,0,0.0632365371242573,0,0.156998727841375,0,0,0,0,0,0,0.241177159752417,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0.938760993154008,0.167506257441816,0,0,0.945810864637146,1.10732344824387,2.23236676120482,0,0,0,0,0,0,0,0.160550589987792,0,0,0,0,0,0.215423397732799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214337035031592,0,0.178368817602071,0,0,0,0,0,0,0,0,0,0,0,0.556275906031529,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.95326289831947,1.38097570952153,2.86447756719698,1.54667864109319,1.37016503954128,0,0,0.900642406448441,0.453142408984205,1.03552062350364,0,0.399024873401031,0,0,0,0,0,0,0,0.252697211763798,0,0,0,0.0640251524048693,0.0574354689556133,0,0,0,0,0,0,0.354951612318675,0,0.145346416632329,0.0941093804153306,0.0846146078916765,0.182927972872773,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr3:29366821..29366826,+ | |||
}} |
Latest revision as of 08:43, 6 August 2015
Short description: | p@chr3:29366821..29366826, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:29366821..29366826, + |
Coexpression cluster: | MCL_coexpression_mm9:3405 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
occipital lobe | 2.51e-39 | 10 |
visual cortex | 2.51e-39 | 10 |
neocortex | 2.51e-39 | 10 |
regional part of cerebral cortex | 2.95e-23 | 17 |
cerebral cortex | 7.19e-19 | 21 |
cerebral hemisphere | 7.19e-19 | 21 |
pallium | 7.19e-19 | 21 |
brain grey matter | 1.05e-13 | 29 |
regional part of telencephalon | 1.05e-13 | 29 |
telencephalon | 1.05e-13 | 29 |
gray matter | 1.05e-11 | 34 |
regional part of forebrain | 3.26e-10 | 39 |
forebrain | 3.26e-10 | 39 |
future forebrain | 3.26e-10 | 39 |
anterior neural tube | 5.85e-10 | 40 |
regional part of brain | 1.16e-08 | 46 |
brain | 1.77e-08 | 47 |
future brain | 1.77e-08 | 47 |
pre-chordal neural plate | 3.93e-08 | 49 |
neural tube | 1.16e-07 | 52 |
neural rod | 1.16e-07 | 52 |
future spinal cord | 1.16e-07 | 52 |
neural keel | 1.16e-07 | 52 |
regional part of nervous system | 2.24e-07 | 54 |