FFCP PHASE2:Hg19::chr2:48667898..48667981,+: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:129285 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:30595 |TSScl...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=129285 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=30595 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=Q6ZMI0,F8WE40,E1B6W7 | ||
|association_with_transcript=0bp_to_ENST00000281394,ENST00000294952,ENST00000416913,NM_001135629,NM_001193475,NM_152994,NR_024188,uc002rwi.1,uc002rwj.2,uc002rwk.2,uc002rwl.2,uc002rwm.2,uc010yok.1_5end | |association_with_transcript=0bp_to_ENST00000281394,ENST00000294952,ENST00000416913,NM_001135629,NM_001193475,NM_152994,NR_024188,uc002rwi.1,uc002rwj.2,uc002rwk.2,uc002rwl.2,uc002rwm.2,uc010yok.1_5end | ||
|cluster_id=chr2:48667898..48667981,+ | |cluster_id=chr2:48667898..48667981,+ | ||
Latest revision as of 12:51, 17 September 2015
| Short description: | p1@PPP1R21 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_1_at_PPP1R21_5end |
| Coexpression cluster: | C257_pineal_insula_frontal_occipital_temporal_medial_paracentral |
| Association with transcript: | 0bp_to_ENST00000281394, ENST00000294952, ENST00000416913, NM_001135629, NM_001193475, NM_152994, NR_024188, uc002rwi.1, uc002rwj.2, uc002rwk.2, uc002rwl.2, uc002rwm.2, uc010yok.1_5end |
| EntrezGene: | PPP1R21 |
| HGNC: | 30595 |
| UniProt: | Q6ZMI0F8WE40E1B6W7 |
| Genome view: | ZENBU |
View on UCSC genome browser
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CAGE Expression
| Sample | p1@PPP1R21 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| adult organism | 3.61e-29 | 114 |
| neural tube | 1.32e-22 | 56 |
| neural rod | 1.32e-22 | 56 |
| future spinal cord | 1.32e-22 | 56 |
| neural keel | 1.32e-22 | 56 |
| regional part of nervous system | 3.80e-21 | 53 |
| regional part of brain | 3.80e-21 | 53 |
| regional part of forebrain | 2.36e-20 | 41 |
| forebrain | 2.36e-20 | 41 |
| anterior neural tube | 2.36e-20 | 41 |
Showing 1 to 10 of 30 entries
