FFCP PHASE1:Hg19::chr3:10362736..10362809,-: Difference between revisions
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=6396 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=10697 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=P55735,A8MTC1,A8MTA5,A8MWR8,A8MXL6,C9J0S2,E7ERC8,C9JIB6,C9JBJ5 | ||
|association_with_transcript=0bp_to_ENST00000337354,ENST00000383801,ENST00000397099,ENST00000397101,ENST00000397102,ENST00000397105,ENST00000397117,ENST00000428626,ENST00000431352,ENST00000432213,ENST00000445064,uc003bvq.1_5end | |association_with_transcript=0bp_to_ENST00000337354,ENST00000383801,ENST00000397099,ENST00000397101,ENST00000397102,ENST00000397105,ENST00000397117,ENST00000428626,ENST00000431352,ENST00000432213,ENST00000445064,uc003bvq.1_5end | ||
|cluster_id=chr3:10362736..10362809,- | |cluster_id=chr3:10362736..10362809,- |
Latest revision as of 08:50, 19 September 2015
Short description: | p1@SEC13 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SEC13_5end |
Coexpression cluster: | C562_Smooth_Fibroblast_Preadipocyte_Hepatic_Alveolar_Adipocyte_Mesenchymal |
Association with transcript: | 0bp_to_ENST00000337354, ENST00000383801, ENST00000397099, ENST00000397101, ENST00000397102, ENST00000397105, ENST00000397117, ENST00000428626, ENST00000431352, ENST00000432213, ENST00000445064, uc003bvq.1_5end |
EntrezGene: | SEC13 |
HGNC: | 10697 |
UniProt: | P55735A8MTC1A8MTA5A8MWR8A8MXL6C9J0S2E7ERC8C9JIB6C9JBJ5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p1@SEC13 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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mesodermal cell | 1.34e-28 | 121 |
embryonic cell | 2.33e-23 | 250 |
muscle precursor cell | 3.24e-22 | 58 |
myoblast | 3.24e-22 | 58 |
multi-potent skeletal muscle stem cell | 3.24e-22 | 58 |
muscle cell | 1.31e-21 | 55 |
smooth muscle cell | 6.35e-20 | 43 |
smooth muscle myoblast | 6.35e-20 | 43 |
electrically responsive cell | 7.03e-20 | 61 |
electrically active cell | 7.03e-20 | 61 |
Showing 1 to 10 of 23 entries
Ontology term | p-value | n |
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epithelial vesicle | 2.27e-26 | 78 |
unilaminar epithelium | 1.81e-24 | 148 |
multilaminar epithelium | 8.05e-24 | 83 |
somite | 2.31e-23 | 71 |
presomitic mesoderm | 2.31e-23 | 71 |
presumptive segmental plate | 2.31e-23 | 71 |
dermomyotome | 2.31e-23 | 71 |
trunk paraxial mesoderm | 2.31e-23 | 71 |
dense mesenchyme tissue | 1.17e-22 | 73 |
paraxial mesoderm | 2.86e-22 | 72 |
Showing 1 to 10 of 50 entries