FFCP PHASE2:Hg19::chr6:72596604..72596697,+: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:22999 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:17282 |TSScla...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=22999 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=17282 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=E7EX08,E7ENC2,E7ERQ1,E9PHR1,C9JNW6,B7Z2Q9,Q3ZCW0,Q86UR5 | ||
|association_with_transcript=0bp_to_ENST00000346609,ENST00000348717,ENST00000349908,ENST00000350827,ENST00000352008,NM_014989,uc003pga.2_5end | |association_with_transcript=0bp_to_ENST00000346609,ENST00000348717,ENST00000349908,ENST00000350827,ENST00000352008,NM_014989,uc003pga.2_5end | ||
|cluster_id=chr6:72596604..72596697,+ | |cluster_id=chr6:72596604..72596697,+ |
Latest revision as of 16:24, 19 September 2015
Short description: | p1@RIMS1 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RIMS1_5end |
Coexpression cluster: | C118_cerebellum_parietal_occipital_medial_middle_frontal_insula |
Association with transcript: | 0bp_to_ENST00000346609, ENST00000348717, ENST00000349908, ENST00000350827, ENST00000352008, NM_014989, uc003pga.2_5end |
EntrezGene: | RIMS1 |
HGNC: | 17282 |
UniProt: | E7EX08E7ENC2E7ERQ1E9PHR1C9JNW6B7Z2Q9Q3ZCW0Q86UR5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p1@RIMS1 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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neural tube | 2.27e-105 | 56 |
neural rod | 2.27e-105 | 56 |
future spinal cord | 2.27e-105 | 56 |
neural keel | 2.27e-105 | 56 |
regional part of nervous system | 4.14e-102 | 53 |
regional part of brain | 4.14e-102 | 53 |
central nervous system | 2.26e-90 | 81 |
brain | 1.94e-88 | 68 |
future brain | 1.94e-88 | 68 |
nervous system | 3.86e-87 | 89 |
Showing 1 to 10 of 98 entries