FFCP PHASE2:Hg19::chr14:33403779..33403793,+: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:64067 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:19311 |TSScla...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=64067 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=19311 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=F8VR32,F8VS42 | ||
|association_with_transcript=-345bp_to_ENST00000551492,ENST00000551634_5end | |association_with_transcript=-345bp_to_ENST00000551492,ENST00000551634_5end | ||
|cluster_id=chr14:33403779..33403793,+ | |cluster_id=chr14:33403779..33403793,+ | ||
Latest revision as of 18:08, 19 September 2015
| Short description: | p6@NPAS3 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_6_at_NPAS3_5end |
| Coexpression cluster: | C1030_Astrocyte_anaplastic_Neural_parietal_hippocampus_occipital_spinal |
| Association with transcript: | -345bp_to_ENST00000551492, ENST00000551634_5end |
| EntrezGene: | NPAS3 |
| HGNC: | 19311 |
| UniProt: | F8VR32F8VS42 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p6@NPAS3 |
|---|
0.0
2.5
5.0
7.5
10.0
12.5
15.0
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| astrocyte of the cerebral cortex | 1.22e-11 | 3 |
| neuronal stem cell | 4.10e-10 | 8 |
| neural cell | 9.35e-07 | 25 |
Showing 1 to 3 of 3 entries
| Ontology term | p-value | n |
|---|---|---|
| neural tube | 3.52e-110 | 56 |
| neural rod | 3.52e-110 | 56 |
| future spinal cord | 3.52e-110 | 56 |
| neural keel | 3.52e-110 | 56 |
| regional part of nervous system | 4.76e-106 | 53 |
| regional part of brain | 4.76e-106 | 53 |
| central nervous system | 6.20e-103 | 81 |
| brain grey matter | 4.27e-93 | 34 |
| gray matter | 4.27e-93 | 34 |
| telencephalon | 5.63e-93 | 34 |
Showing 1 to 10 of 96 entries
