FFCP PHASE2:Hg19::chr2:216236659..216236746,-: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:2335 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:3778 |TSSclass...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=2335 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=3778 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt= | ||
Latest revision as of 01:56, 20 September 2015
| Short description: | p38@FN1 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_38_at_FN1_5end |
| Coexpression cluster: | C79_chorionic_Chondrocyte_Cardiac_Smooth_Fibroblast_Preadipocyte_Mesenchymal |
| Association with transcript: | 415bp_to_ENST00000485567_5end |
| EntrezGene: | FN1 |
| HGNC: | 3778 |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p38@FN1 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| fibroblast | 4.11e-23 | 76 |
| muscle precursor cell | 2.42e-21 | 58 |
| myoblast | 2.42e-21 | 58 |
| multi-potent skeletal muscle stem cell | 2.42e-21 | 58 |
| muscle cell | 2.05e-19 | 55 |
| multi fate stem cell | 1.03e-18 | 427 |
| somatic stem cell | 2.10e-18 | 433 |
| stem cell | 6.49e-17 | 441 |
| electrically responsive cell | 1.14e-15 | 61 |
| electrically active cell | 1.14e-15 | 61 |
Showing 1 to 10 of 19 entries
| Ontology term | p-value | n |
|---|---|---|
| somite | 1.80e-23 | 71 |
| presomitic mesoderm | 1.80e-23 | 71 |
| presumptive segmental plate | 1.80e-23 | 71 |
| dermomyotome | 1.80e-23 | 71 |
| trunk paraxial mesoderm | 1.80e-23 | 71 |
| dense mesenchyme tissue | 2.17e-23 | 73 |
| paraxial mesoderm | 8.33e-23 | 72 |
| presumptive paraxial mesoderm | 8.33e-23 | 72 |
| epithelial vesicle | 1.19e-22 | 78 |
| trunk mesenchyme | 4.79e-21 | 122 |
Showing 1 to 10 of 57 entries
