FFCP PHASE2:Hg19::chr5:133450458..133450469,+: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:6932 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:11639 |TSSclas...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=6932 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=11639 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=B7WNT5 | ||
|association_with_transcript=55bp_to_ENST00000395029_5end | |association_with_transcript=55bp_to_ENST00000395029_5end | ||
|cluster_id=chr5:133450458..133450469,+ | |cluster_id=chr5:133450458..133450469,+ |
Latest revision as of 07:36, 20 September 2015
Short description: | p4@TCF7 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_TCF7_5end |
Coexpression cluster: | C1952_thymus_Hodgkin_acute_CD8_CD4_Whole_lymph |
Association with transcript: | 55bp_to_ENST00000395029_5end |
EntrezGene: | TCF7 |
HGNC: | 11639 |
UniProt: | B7WNT5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p4@TCF7 |
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0.0
2.5
5.0
7.5
10.0
12.5
15.0
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
T cell | 2.09e-24 | 25 |
pro-T cell | 2.09e-24 | 25 |
mature alpha-beta T cell | 2.71e-22 | 18 |
alpha-beta T cell | 2.71e-22 | 18 |
immature T cell | 2.71e-22 | 18 |
mature T cell | 2.71e-22 | 18 |
immature alpha-beta T cell | 2.71e-22 | 18 |
lymphoid lineage restricted progenitor cell | 4.45e-18 | 52 |
lymphocyte | 1.23e-17 | 53 |
common lymphoid progenitor | 1.23e-17 | 53 |
Showing 1 to 10 of 18 entries
Ontology term | p-value | n |
---|---|---|
blood | 1.10e-08 | 15 |
haemolymphatic fluid | 1.10e-08 | 15 |
organism substance | 1.10e-08 | 15 |
pharyngeal epithelium | 4.00e-08 | 6 |
thymus | 1.50e-07 | 4 |
hemolymphoid system gland | 1.50e-07 | 4 |
thymic region | 1.50e-07 | 4 |
pharyngeal gland | 1.50e-07 | 4 |
thymus primordium | 1.50e-07 | 4 |
chordate pharynx | 4.29e-07 | 10 |
Showing 1 to 10 of 11 entries
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 5.09e-07 | 2 |
Showing 1 to 1 of 1 entries