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(Created page with "{{f5samples |id=FF:10689-109F5 |name=mixed mullerian tumor cell line:HTMMT, biol_rep1 |sample_id=10689 |rna_tube_id=109F5 |rna_box=109 |rna_position=F5 |sample_cell_lot...")
 
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{{f5samples
{{f5samples
|id=FF:10689-109F5
|DRA_sample_Accession=CAGE@SAMD00004901
|name=mixed mullerian tumor cell line:HTMMT, biol_rep1
|accession_numbers=CAGE;DRX007952;DRR008824;DRZ000249;DRZ001634;DRZ011599;DRZ012984
|sample_id=10689
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0003134,UBERON:0005156,UBERON:0000062,UBERON:0004120,UBERON:0000061,UBERON:0000465,UBERON:0000990,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0003133,UBERON:0010317,UBERON:0003100,UBERON:0000474
|rna_tube_id=109F5
|rna_box=109
|rna_position=F5
|sample_cell_lot=
|sample_cell_catalog=RCB0660
|sample_company=RIKEN Bioresource centre
|rna_lot_number=
|rna_catalog_number=
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_dev_stage=
|sample_tissue=endometrium
|sample_donor(cell lot)=
|sample_sex=female
|sample_age=66
|sample_ethnicity=unknown
|rna_rin=
|rna_od260/230=1.87000
|rna_od260/280=2.01000
|sample_cell_type=unclassifiable
|sample_cell_line=HTMMT
|sample_collaboration=Yukio Nakamura (RIKEN BRC)
|sample_experimental_condition=
|sample_disease=mixed mullerian tumor
|rna_sample_type=total RNA
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0
|rna_weight_ug=11.20041
|rna_concentration=0.41483
|sample_note=
|profile_hcage=CNhs11944,LSID836,release011,COMPLETED
|profile_cagescan=,,,
|profile_srnaseq=,,,
|profile_rnaseq=,,,
|ancestors_in_cell_lineage_facet=
|ancestors_in_cell_lineage_facet=
|ancestors_in_anatomy_facet=UBERON:0000061,UBERON:0000062,UBERON:0000465,UBERON:0000467,UBERON:0000468,UBERON:0000474,UBERON:0000480,UBERON:0000922,UBERON:0000923,UBERON:0000926,UBERON:0000990,UBERON:0001062,UBERON:0002050,UBERON:0002532,UBERON:0003100,UBERON:0003133,UBERON:0003134,UBERON:0004120,UBERON:0005156,UBERON:0005423
|ancestors_in_disease_facet=DOID:4,DOID:162,DOID:14566,DOID:0050687,DOID:154,DOID:4236
|ancestors_in_disease_facet=DOID:0050687,DOID:14566,DOID:154,DOID:162,DOID:4,DOID:4236
|ancestors_in_ff_facet=FF:0000102,FF:0000003,FF:0000210,FF:0000101,FF:0000001
|sample_description=
|comment=
 
|created_by=
|creation_date=
|data_phase=2
|datafreeze_phase=2
|def=
|expression_enrichment_score=chr6:10415276..10415341,-!p2@TFAP2A!1.61!48.16!TFAP2A;;chr6:10412600..10412637,-!p1@TFAP2A!1.51!51.11!TFAP2A;;chr12:54410664..54410684,+!p1@HOXC4,p1@HOXC5,p1@HOXC6!1.41!24.90!HOXC5;;chr11:31832658..31832681,-!p1@PAX6!1.31!19.33!PAX6;;chr6:10412392..10412409,-!p4@TFAP2A!1.29!20.97!TFAP2A;;chr7:27205136..27205164,-!p1@HOXA9!1.25!16.71!HOXA9;;chr12:54393880..54393962,+!p1@HOXC9!1.25!16.71!HOXC9;;chr17:46703687..46703740,-!p1@HOXB9!1.19!14.41!HOXB9;;chr6:10415484..10415508,-!p3@TFAP2A!1.11!11.79!TFAP2A;;chr14:61116183..61116208,-!p1@SIX1!1.10!43.90!SIX1;;chr5:72744594..72744609,-!p1@FOXD1!1.09!51.76!FOXD1;;chr17:46688334..46688385,-!p1@HOXB7!1.09!16.38!HOXB7;;chr6:126240380..126240430,+!p2@NCOA7!1.08!28.83!NCOA7;;chr6:85473156..85473210,-!p2@TBX18!1.08!13.43!TBX18;;chrX:2418949..2419024,-!p1@DHRSX,p1@ZBED1!1.08!11.14!ZBED1;;chr5:321810..321877,+!p1@AHRR!1.06!33.42!AHRR;;chr14:37131058..37131139,+!p1@PAX9!1.06!10.48!PAX9;;chr7:35293685..35293718,-!p1@TBX20!1.01!9.17!TBX20;;chr8:72756637..72756664,-!p3@MSC!1.00!10.16!MSC;;chr5:172662197..172662216,-!p1@NKX2-5!0.99!8.85!NKX2-5;;chr20:30433396..30433414,-!p1@FOXS1!0.98!8.52!FOXS1;;chr1:25256756..25256774,-!p1@RUNX3!0.97!16.05!RUNX3;;chr17:46622229..46622257,-!p6@HOXB2!0.97!9.83!HOXB2;;chr5:158526917..158526932,-!p1@EBF1!0.95!20.31!EBF1;;chr6:10412477..10412490,-!p10@TFAP2A!0.95!7.86!TFAP2A;;chr9:96717629..96717644,-!p1@BARX1!0.95!7.86!BARX1;;chr6:85474299..85474324,-!p1@TBX18!0.94!14.09!TBX18;;chr7:27224842..27224872,-!p1@HOXA11!0.93!7.54!HOXA11;;chr8:80679993..80680011,-!p1@HEY1!0.92!10.81!HEY1;;chr7:63505799..63505904,+!p1@ZNF727!0.91!7.21!ZNF727;;chr6:126102292..126102329,+!p3@NCOA7!0.90!23.59!NCOA7;;chr1:25291475..25291511,-!p2@RUNX3!0.90!6.88!RUNX3;;chr14:29236269..29236285,+!p3@FOXG1!0.90!6.88!FOXG1;;chr17:46682321..46682362,-!p1@HOXB6!0.90!6.88!HOXB6;;chr5:72744445..72744466,-!p2@FOXD1!0.89!11.47!FOXD1;;chr7:57509877..57509895,+!p1@ZNF716!0.88!6.55!ZNF716;;chr20:42543441..42543497,+!p1@TOX2!0.87!30.14!TOX2;;chr2:172967621..172967637,-!p1@DLX2!0.86!17.36!DLX2;;chr8:72756667..72756736,-!p2@MSC!0.86!10.16!MSC;;chr14:62203595..62203676,+!p4@HIF1A!0.85!11.79!HIF1A;;chr3:157823517..157823562,-!p1@SHOX2!0.85!6.55!SHOX2;;chr17:46622205..46622218,-!p3@HOXB2!0.84!6.88!HOXB2;;chr2:172949484..172949522,+!p1@DLX1!0.84!5.90!DLX1;;chr12:54366975..54367001,+!p1@HOXC11!0.84!5.90!HOXC11;;chr6:10412576..10412599,-!p5@TFAP2A!0.84!5.90!TFAP2A;;chr7:156803329..156803362,-!p1@MNX1!0.84!5.90!MNX1;;chr7:27205106..27205134,-!p2@HOXA9!0.84!5.90!HOXA9;;chr5:134369905..134369972,-!p1@PITX1!0.83!9.17!PITX1;;chr8:72756063..72756125,-!p1@MSC!0.82!11.79!MSC;;chr17:46687959..46688007,-!p2@HOXB7!0.82!7.86!HOXB7;;chr20:55204351..55204377,+!p1@TFAP2C!0.82!7.21!TFAP2C;;chr12:54380404..54380433,+!p3@HOXC10!0.82!5.57!HOXC10;;chr3:12329358..12329393,+!p3@PPARG!0.81!14.09!PPARG;;chr20:32274150..32274166,-!p2@E2F1!0.80!10.48!E2F1;;chr14:29235961..29236008,+!p1@FOXG1!0.80!5.24!FOXG1;;chr6:85473227..85473243,-!p5@TBX18!0.80!5.24!TBX18;;chr3:157824001..157824078,-!p2@SHOX2!0.80!5.24!SHOX2;;chr20:32274179..32274213,-!p1@E2F1!0.79!37.68!E2F1;;chr20:48599506..48599526,+!p1@SNAI1!0.79!35.71!SNAI1;;chr12:80084737..80084763,-!p3@PAWR!0.79!20.97!PAWR;;chr19:20188776..20188826,+!p1@ZNF90!0.78!14.41!ZNF90;;chr9:114287433..114287513,+!p1@ZNF483!0.78!14.09!ZNF483;;chr7:19157043..19157088,-!p2@TWIST1!0.78!13.43!TWIST1;;chr19:12203100..12203132,+!p1@ZNF788!0.78!10.81!ZNF788;;chr6:28973090..28973094,-!p1@ZNF311!0.78!6.55!ZNF311;;chr6:126240356..126240379,+!p7@NCOA7!0.78!6.22!NCOA7;;chr6:1389789..1389821,+!p1@FOXF2!0.77!6.88!FOXF2;;chr8:72755987..72756002,-!p7@MSC!0.77!4.91!MSC;;chr12:54402745..54402788,+!p1@HOXC8!0.77!4.91!HOXC8;;chr2:172967323..172967336,-!p4@DLX2!0.77!4.91!DLX2;;chr2:172967353..172967365,-!p5@DLX2!0.77!4.91!DLX2;;chr2:176994408..176994492,+!p1@HOXD8!0.77!4.91!HOXD8;;chr2:223163706..223163730,-!p1@PAX3!0.77!4.91!PAX3;;chr7:17369649..17369664,+!p4@AHR!0.76!5.90!AHR;;chr11:46299199..46299233,+!p1@CREB3L1!0.75!26.21!CREB3L1;;chr1:50889103..50889145,-!p1@DMRTA2!0.75!4.59!DMRTA2;;chr21:47063625..47063658,+!p1@PCBP3!0.74!21.62!PCBP3;;chr17:41623692..41623715,-!p1@ETV4!0.74!20.97!ETV4;;chr3:12329397..12329433,+!p2@PPARG!0.74!11.14!PPARG;;chr2:177001290..177001315,+!p1@HOXD3!0.72!4.26!HOXD3;;chr12:54410639..54410659,+!p2@HOXC4,p2@HOXC5,p2@HOXC6!0.72!4.26!HOXC5;;chr17:46806067..46806097,-!p1@HOXB13!0.72!4.26!HOXB13;;chr6:31126291..31126399,+!p1@TCF19!0.71!44.55!TCF19;;chr7:27788205..27788255,+!p2@TAX1BP1!0.71!6.88!TAX1BP1;;chr17:46622440..46622477,-!p5@HOXB2!0.70!4.59!HOXB2;;chr19:12163769..12163798,-!p1@ZNF878!0.69!5.24!ZNF878;;chr1:119530493..119530572,-!p1@TBX15!0.69!3.93!TBX15;;chr2:46612891..46612907,+!p10@EPAS1!0.69!3.93!EPAS1;;chr11:44331576..44331650,-!p1@ALX4!0.69!3.93!ALX4;;chr12:54378923..54378966,+!p1@HOXC10!0.69!3.93!HOXC10;;chr13:79177703..79177729,-!p2@POU4F1!0.69!3.93!POU4F1;;chr14:62203749..62203798,+!p5@HIF1A!0.68!6.22!HIF1A;;chr20:42543506..42543549,+!p2@TOX2!0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WR;;chr13:100634088..100634099,+!p5@ZIC2!0.22!0.66!ZIC2;;chr13:100638124..100638136,+!p7@ZIC2!0.22!0.66!ZIC2;;chr13:46543936..46543949,-!p19@ZC3H13!0.22!0.66!ZC3H13;;chr14:29236301..29236317,+!p5@FOXG1!0.22!0.66!FOXG1;;chr14:35872542..35872553,-!p10@NFKBIA!0.22!0.66!NFKBIA;;chr14:36989940..36989957,-!p2@NKX2-1!0.22!0.66!NKX2-1;;chr14:37051798..37051831,-!p1@NKX2-8!0.22!0.66!NKX2-8;;chr14:38064429..38064486,-!p1@FOXA1!0.22!0.66!FOXA1;;chr14:61190754..61190776,-!p6@SIX4!0.22!0.66!SIX4;;chr15:66994718..66994729,+!p4@SMAD6!0.22!0.66!SMAD6;;chr15:67418177..67418204,+!p9@SMAD3!0.22!0.66!SMAD3;;chr15:96869206..96869220,+!p21@NR2F2!0.22!0.66!NR2F2;;chr16:30616396..30616400,-!p4@ZNF689!0.22!0.66!ZNF689;;chr16:51185172..51185197,-!p1@SALL1!0.22!0.66!SALL1;;chr16:54320322..54320343,-!p7@IRX3!0.22!0.66!IRX3;;chr16:69726317..69726339,+!p14@NFAT5!0.22!0.66!NFAT5;;chr16:85932760..85932775,+!p1@IRF8!0.22!0.66!IRF8;;chr17:36871943..36871947,+!p8@MLLT6!0.22!0.66!MLLT6;;chr17:38244601..38244612,+!p6@THRA!0.22!0.66!THRA;;chr17:38487563..38487578,+!p10@RARA!0.22!0.66!RARA;;chr17:41622982..41623001,-!p11@ETV4!0.22!0.66!ETV4;;chr17:41623716..41623727,-!p12@ETV4!0.22!0.66!ETV4;;chr17:45810594..45810608,+!p1@TBX21!0.22!0.66!TBX21;;chr17:46690839..46690884,-!p1@HOXB8!0.22!0.66!HOXB8;;chr17:46692624..46692659,-!p3@HOXB8!0.22!0.66!HOXB8;;chr17:59477403..59477414,+!p4@TBX2!0.22!0.66!TBX2;;chr17:7197844..7197869,-!p2@YBX2!0.22!0.66!YBX2;;chr19:13136057..13136085,+!p11@NFIX!0.22!0.66!NFIX;;chr19:20748614..20748617,-!p5@ZNF737!0.22!0.66!ZNF737;;chr19:2867298..2867317,+!p2@ZNF556!0.22!0.66!ZNF556;;chr19:3381943..3381961,+!p8@NFIC!0.22!0.66!NFIC;;chr19:3576938..3576962,+!p9@HMG20B!0.22!0.66!HMG20B;;chr2:46524537..46524553,+!p1@EPAS1!0.21!145.46!EPAS1;;chr5:131826457..131826514,-!p1@IRF1!0.21!57.99!IRF1;;chr6:170863423..170863484,+!p1@TBP!0.21!30.14!TBP;;chr1:78149041..78149142,-!p1@ZZZ3!0.21!27.52!ZZZ3;;chr11:695006..695074,-!p1@DEAF1!0.21!22.28!DEAF1;;chr17:38219209..38219230,+!p1@THRA!0.21!18.67!THRA;;chrX:128657457..128657475,-!p1@SMARCA1!0.21!16.38!SMARCA1;;chr4:10459009..10459061,-!p1@ZNF518B!0.21!12.45!ZNF518B;;chr17:38256822..38256851,-!p1@NR1D1!0.21!10.81!NR1D1;;chr19:50529247..50529296,+!p1@ZNF473!0.21!8.85!ZNF473;;chr8:144373550..144373617,+!p1@ZNF696!0.21!4.59!ZNF696;;chr3:71632864..71632885,-!p4@FOXP1!0.21!4.26!FOXP1;;chr16:89787402..89787430,+!p2@ZNF276!0.21!3.93!ZNF276;;chr19:37096139..37096170,-!p2@ZNF529!0.21!3.28!ZNF529;;chr1:161736038..161736056,+!p4@ATF6!0.21!2.62!ATF6;;chr4:121843844..121843904,-!p1@PRDM5!0.21!2.62!PRDM5;;chr19:19976714..19976729,+!p3@ZNF253!0.21!1.97!ZNF253;;chr1:26496459..26496470,+!p2@ZNF593!0.21!1.97!ZNF593;;chr20:33413372..33413389,-!p2@NCOA6!0.21!1.97!NCOA6;;chr19:45261550..45261641,+!p6@BCL3!0.21!1.64!BCL3;;chr6:21597600..21597664,+!p3@SOX4!0.21!1.64!SOX4;;chr6:28220002..28220020,-!p3@ZKSCAN4!0.21!1.31!ZKSCAN4;;chr3:25469724..25469773,+!p1@RARB!0.21!1.31!RARB;;chr11:47270477..47270494,+!p4@NR1H3!0.21!1.31!NR1H3;;chr12:49445907..49445923,-!p2@MLL2!0.21!1.31!MLL2;;chr17:38792325..38792330,-!p3@SMARCE1!0.21!1.31!SMARCE1;;chr19:20844346..20844351,-!p2@ZNF626!0.21!0.98!ZNF626;;chr19:23299814..23299844,+!p1@ZNF730!0.21!0.98!ZNF730;;chr19:37998036..37998098,+!p2@ZNF793!0.21!0.98!ZNF793;;chr3:114343195..114343206,-!p11@ZBTB20!0.21!0.98!ZBTB20;;chr8:37963466..37963506,+!p3@ASH2L!0.21!0.98!ASH2L;;chrX:129244499..129244506,-!p7@ELF4!0.21!0.98!ELF4;;chr14:74253948..74253964,-!p9@C14orf43!0.21!0.98!C14orf43;;
|ffid_belonging_in_development=UBERON:0002532,UBERON:0006603,UBERON:0010316
|fonse_cell_line=FF:10689-109F5
|fonse_cell_line=FF:10689-109F5
|fonse_cell_line_closure=FF:10689-109F5
|fonse_cell_line_closure=FF:10689-109F5
Line 67: Line 40:
|fonse_treatment=
|fonse_treatment=
|fonse_treatment_closure=
|fonse_treatment_closure=
|has_quality=
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/mixed%2520mullerian%2520tumor%2520cell%2520line%253aHTMMT.CNhs11944.10689-109F5.hg19.nobarcode.bam
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/mixed%2520mullerian%2520tumor%2520cell%2520line%253aHTMMT.CNhs11944.10689-109F5.hg19.ctss.bed.gz
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/mixed%2520mullerian%2520tumor%2520cell%2520line%253aHTMMT.CNhs11944.10689-109F5.hg19.nobarcode.rdna.fa.gz
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.cell_line.hCAGE/mixed%2520mullerian%2520tumor%2520cell%2520line%253aHTMMT.CNhs11944.10689-109F5.hg38.nobarcode.bam
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.cell_line.hCAGE/mixed%2520mullerian%2520tumor%2520cell%2520line%253aHTMMT.CNhs11944.10689-109F5.hg38.nobarcode.ctss.bed.gz
|id=FF:10689-109F5
|is_a=DOID:4236;;EFO:0002091;;FF:0000003;;FF:0000210;;UBERON:0003134
|is_obsolete=
|library_id=CNhs11944
|library_id_phase_based=2:CNhs11944
|microRNAs=
|microRNAs_nn=
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;10689
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;10689
|name=mixed mullerian tumor cell line:HTMMT
|namespace=FANTOM5
|part_of=
|profile_cagescan=,,,
|profile_hcage=CNhs11944,LSID836,release011,COMPLETED
|profile_rnaseq=
|profile_srnaseq=,,,
|refex=http://refex.dbcls.jp/genelist.php?lang
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|rna_box=109
|rna_catalog_number=
|rna_concentration=0.41483
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0
|rna_lot_number=
|rna_od260/230=1.87
|rna_od260/280=2.01
|rna_position=F5
|rna_rin=
|rna_sample_type=total RNA
|rna_tube_id=109F5
|rna_weight_ug=11.20041
|sample_age=66
|sample_category=cell lines
|sample_cell_catalog=RCB0660
|sample_cell_line=HTMMT
|sample_cell_lot=
|sample_cell_type=unclassifiable
|sample_collaboration=Yukio Nakamura (RIKEN BRC)
|sample_company=RIKEN Bioresource centre
|sample_description=
|sample_dev_stage=
|sample_disease=mixed mullerian tumor
|sample_donor(cell lot)=
|sample_ethnicity=unknown
|sample_experimental_condition=
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;1.53322198208754e-267!GO:0043231;intracellular membrane-bound organelle;7.55061280292482e-225!GO:0043227;membrane-bound organelle;1.32274377404626e-224!GO:0043226;organelle;9.93881554213136e-220!GO:0043229;intracellular organelle;4.05687999946456e-219!GO:0005737;cytoplasm;6.67209748664318e-187!GO:0044422;organelle part;3.75528889764811e-148!GO:0044446;intracellular organelle part;1.36086087957032e-146!GO:0044444;cytoplasmic part;2.60401959748541e-132!GO:0032991;macromolecular complex;1.52994369332538e-105!GO:0044237;cellular metabolic process;8.14623480917077e-98!GO:0005634;nucleus;1.05132729844889e-97!GO:0044238;primary metabolic process;2.68529461559018e-97!GO:0043170;macromolecule metabolic process;4.18150214545608e-92!GO:0030529;ribonucleoprotein complex;5.80886309994647e-91!GO:0043233;organelle lumen;8.04830646443668e-80!GO:0031974;membrane-enclosed lumen;8.04830646443668e-80!GO:0044428;nuclear part;1.00553406641997e-79!GO:0005739;mitochondrion;2.04744677576662e-76!GO:0003723;RNA binding;2.79481879731017e-73!GO:0005515;protein binding;5.02656734759855e-72!GO:0043283;biopolymer metabolic process;4.54208339912956e-55!GO:0005840;ribosome;4.14829184233801e-54!GO:0043234;protein complex;3.10478387799786e-53!GO:0006396;RNA processing;2.53785617702323e-52!GO:0010467;gene expression;5.87667873733334e-52!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;3.20989546093906e-51!GO:0031090;organelle membrane;1.34294685571208e-50!GO:0016043;cellular component organization and biogenesis;3.32126789962673e-49!GO:0044429;mitochondrial part;8.37099702343582e-49!GO:0006412;translation;1.09879974381218e-48!GO:0033036;macromolecule localization;2.83930903732547e-48!GO:0015031;protein transport;2.2143505998002e-47!GO:0019538;protein metabolic process;8.31304431439652e-47!GO:0003735;structural constituent of ribosome;1.29009731964643e-45!GO:0031981;nuclear lumen;2.15196331143725e-45!GO:0008104;protein localization;2.3663683968716e-44!GO:0045184;establishment of protein localization;3.35427862366785e-44!GO:0031967;organelle envelope;6.21668925243923e-43!GO:0031975;envelope;1.17695550632382e-42!GO:0044260;cellular macromolecule metabolic process;6.70186238769716e-41!GO:0044267;cellular protein metabolic process;2.01239332537113e-40!GO:0033279;ribosomal subunit;7.38506710115455e-40!GO:0046907;intracellular transport;1.30872081690517e-39!GO:0016071;mRNA metabolic process;1.47020975686748e-39!GO:0044249;cellular biosynthetic process;1.02339774073704e-37!GO:0008380;RNA splicing;1.52231781320371e-36!GO:0009058;biosynthetic process;1.65353759489546e-36!GO:0009059;macromolecule biosynthetic process;7.76281223647159e-35!GO:0005829;cytosol;8.52567896824349e-35!GO:0003676;nucleic acid binding;1.13813532164452e-33!GO:0006397;mRNA processing;2.04014154425875e-33!GO:0006886;intracellular protein transport;1.10475010141816e-32!GO:0065003;macromolecular complex assembly;1.33447966599922e-32!GO:0043228;non-membrane-bound organelle;4.01988255580298e-30!GO:0043232;intracellular non-membrane-bound organelle;4.01988255580298e-30!GO:0005654;nucleoplasm;7.6203919425334e-30!GO:0022613;ribonucleoprotein complex biogenesis and assembly;1.42377525685772e-29!GO:0006259;DNA metabolic process;4.61801532410399e-29!GO:0006996;organelle organization and biogenesis;4.79214057564242e-29!GO:0005740;mitochondrial envelope;2.08568187553598e-28!GO:0022607;cellular component assembly;2.26026580256278e-28!GO:0019866;organelle inner membrane;3.0548616889702e-28!GO:0016070;RNA metabolic process;2.6451725056694e-27!GO:0005681;spliceosome;6.73829438806156e-27!GO:0031966;mitochondrial membrane;9.76439923183959e-27!GO:0051649;establishment of cellular localization;1.01010656762154e-26!GO:0051641;cellular localization;2.6525529789271e-26!GO:0005743;mitochondrial inner membrane;5.37942994824552e-26!GO:0005830;cytosolic ribosome (sensu Eukaryota);1.80915997626618e-25!GO:0000166;nucleotide binding;2.01893182823497e-25!GO:0044451;nucleoplasm part;1.47329013837665e-24!GO:0007049;cell cycle;1.52542601830266e-24!GO:0031980;mitochondrial lumen;1.42569672105355e-23!GO:0005759;mitochondrial matrix;1.42569672105355e-23!GO:0006119;oxidative phosphorylation;1.09907243613234e-22!GO:0016462;pyrophosphatase activity;1.43398002582768e-22!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;1.81904796453843e-22!GO:0044455;mitochondrial membrane part;2.85333787343784e-22!GO:0016817;hydrolase activity, acting on acid anhydrides;2.865384138239e-22!GO:0006457;protein folding;3.76170101287043e-22!GO:0017111;nucleoside-triphosphatase activity;1.84750640412423e-21!GO:0015935;small ribosomal subunit;4.06263229576331e-21!GO:0012505;endomembrane system;2.32562588656027e-20!GO:0015934;large ribosomal subunit;6.64383966958355e-20!GO:0044445;cytosolic part;8.5810723996872e-20!GO:0016874;ligase activity;1.24151922836739e-19!GO:0006974;response to DNA damage stimulus;4.48505414751529e-19!GO:0005761;mitochondrial ribosome;1.8425100447531e-18!GO:0000313;organellar ribosome;1.8425100447531e-18!GO:0032553;ribonucleotide binding;2.18755018192729e-18!GO:0032555;purine ribonucleotide binding;2.18755018192729e-18!GO:0022402;cell cycle process;3.26172306385729e-18!GO:0006512;ubiquitin cycle;3.33963304404259e-18!GO:0048770;pigment granule;3.74358713641141e-18!GO:0042470;melanosome;3.74358713641141e-18!GO:0051603;proteolysis involved in cellular protein catabolic process;4.07363826585635e-18!GO:0005783;endoplasmic reticulum;5.83459599495924e-18!GO:0019941;modification-dependent protein catabolic process;6.34724307291926e-18!GO:0043632;modification-dependent macromolecule catabolic process;6.34724307291926e-18!GO:0008134;transcription factor binding;9.06382483202298e-18!GO:0044265;cellular macromolecule catabolic process;1.02991094551425e-17!GO:0017076;purine nucleotide binding;1.12273664862735e-17!GO:0044257;cellular protein catabolic process;1.50494786446781e-17!GO:0006511;ubiquitin-dependent protein catabolic process;1.64588627136989e-17!GO:0000502;proteasome complex (sensu Eukaryota);2.15253308525868e-17!GO:0005746;mitochondrial respiratory chain;2.23752872588647e-17!GO:0005730;nucleolus;3.6845069375111e-17!GO:0051186;cofactor metabolic process;9.05543929870643e-17!GO:0000278;mitotic cell cycle;1.11369846237069e-16!GO:0022618;protein-RNA complex assembly;1.42907536078565e-16!GO:0006281;DNA repair;1.78294607313412e-16!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;2.27781765483627e-16!GO:0051082;unfolded protein binding;2.3458461812682e-16!GO:0006605;protein targeting;2.88883576870255e-16!GO:0043285;biopolymer catabolic process;3.24507414411204e-16!GO:0044432;endoplasmic reticulum part;9.4571992035582e-16!GO:0050136;NADH dehydrogenase (quinone) activity;1.25344016391726e-15!GO:0003954;NADH dehydrogenase activity;1.25344016391726e-15!GO:0008137;NADH dehydrogenase (ubiquinone) activity;1.25344016391726e-15!GO:0044248;cellular catabolic process;2.75838426165127e-15!GO:0005635;nuclear envelope;3.57221724601658e-15!GO:0048193;Golgi vesicle transport;3.88284379263572e-15!GO:0031965;nuclear membrane;4.56367258460617e-15!GO:0009057;macromolecule catabolic process;6.11830226114188e-15!GO:0030163;protein catabolic process;1.02593298451294e-14!GO:0006260;DNA replication;1.1688279479116e-14!GO:0008135;translation factor activity, nucleic acid binding;2.9079059067033e-14!GO:0005524;ATP binding;3.10814496927024e-14!GO:0005694;chromosome;3.39604109469199e-14!GO:0032559;adenyl ribonucleotide binding;4.97607952128233e-14!GO:0044453;nuclear membrane part;5.77971365782805e-14!GO:0030964;NADH dehydrogenase complex (quinone);1.17815463695689e-13!GO:0045271;respiratory chain complex I;1.17815463695689e-13!GO:0005747;mitochondrial respiratory chain complex I;1.17815463695689e-13!GO:0042775;organelle ATP synthesis coupled electron transport;1.37368171285753e-13!GO:0042773;ATP synthesis coupled electron transport;1.37368171285753e-13!GO:0006732;coenzyme metabolic process;1.41435680465243e-13!GO:0042254;ribosome biogenesis and assembly;1.59264100406091e-13!GO:0012501;programmed cell death;2.94468037008196e-13!GO:0009719;response to endogenous stimulus;3.04792214441183e-13!GO:0030554;adenyl nucleotide binding;3.27659392919244e-13!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;4.09565839838337e-13!GO:0005794;Golgi apparatus;5.17389519665975e-13!GO:0006913;nucleocytoplasmic transport;5.18718224544928e-13!GO:0006915;apoptosis;5.38555137644425e-13!GO:0006366;transcription from RNA polymerase II promoter;5.5546914202723e-13!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);5.76307258614893e-13!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);1.17746024210463e-12!GO:0051169;nuclear transport;1.17944062600013e-12!GO:0000087;M phase of mitotic cell cycle;1.25556102165361e-12!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;1.2736299619917e-12!GO:0000398;nuclear mRNA splicing, via spliceosome;1.36999633422047e-12!GO:0000375;RNA splicing, via transesterification reactions;1.36999633422047e-12!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;1.36999633422047e-12!GO:0022403;cell cycle phase;1.43893614379483e-12!GO:0007067;mitosis;1.86588004008944e-12!GO:0044427;chromosomal part;2.04811956700874e-12!GO:0005643;nuclear pore;4.5808390208918e-12!GO:0016887;ATPase activity;4.85439820451812e-12!GO:0006399;tRNA metabolic process;6.79733062861835e-12!GO:0016192;vesicle-mediated transport;6.90119060378191e-12!GO:0003712;transcription cofactor activity;6.9395991057209e-12!GO:0051301;cell division;1.06579534939059e-11!GO:0008219;cell death;1.30161020349911e-11!GO:0016265;death;1.30161020349911e-11!GO:0043412;biopolymer modification;1.55857746015276e-11!GO:0042623;ATPase activity, coupled;1.71746669985303e-11!GO:0065002;intracellular protein transport across a membrane;2.27212669090015e-11!GO:0050794;regulation of cellular process;2.80160680267134e-11!GO:0042175;nuclear envelope-endoplasmic reticulum network;3.51911744615299e-11!GO:0006461;protein complex assembly;4.37243232453471e-11!GO:0051726;regulation of cell cycle;4.59775954434861e-11!GO:0000074;regulation of progression through cell cycle;6.84425562630891e-11!GO:0009055;electron carrier activity;9.09259012283293e-11!GO:0005789;endoplasmic reticulum membrane;9.55002205372791e-11!GO:0003743;translation initiation factor activity;1.25148401748392e-10!GO:0050657;nucleic acid transport;1.25199750020346e-10!GO:0051236;establishment of RNA localization;1.25199750020346e-10!GO:0050658;RNA transport;1.25199750020346e-10!GO:0006403;RNA localization;1.35826933806154e-10!GO:0005793;ER-Golgi intermediate compartment;1.55298877420715e-10!GO:0008639;small protein conjugating enzyme activity;1.90106290666344e-10!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;1.96036006097755e-10!GO:0006413;translational initiation;2.29378995321378e-10!GO:0006446;regulation of translational initiation;2.59229458348683e-10!GO:0016604;nuclear body;3.48292187399349e-10!GO:0006464;protein modification process;4.36416486713965e-10!GO:0004842;ubiquitin-protein ligase activity;4.37313583113895e-10!GO:0000279;M phase;4.59713092647651e-10!GO:0008565;protein transporter activity;4.90300486818378e-10!GO:0016879;ligase activity, forming carbon-nitrogen bonds;5.18159352116079e-10!GO:0046930;pore complex;5.27867732420834e-10!GO:0051276;chromosome organization and biogenesis;6.89522726613558e-10!GO:0019787;small conjugating protein ligase activity;7.57457990409623e-10!GO:0017038;protein import;8.41062472114637e-10!GO:0009259;ribonucleotide metabolic process;1.15153166522385e-09!GO:0004386;helicase activity;1.69491319338502e-09!GO:0006163;purine nucleotide metabolic process;2.3165907549932e-09!GO:0043687;post-translational protein modification;2.3497831661608e-09!GO:0009056;catabolic process;2.58386039922388e-09!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;3.10092262268875e-09!GO:0007005;mitochondrion organization and biogenesis;3.28879350290257e-09!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;3.79658610769216e-09!GO:0004812;aminoacyl-tRNA ligase activity;3.79658610769216e-09!GO:0016875;ligase activity, forming carbon-oxygen bonds;3.79658610769216e-09!GO:0009060;aerobic respiration;4.40380930995258e-09!GO:0051188;cofactor biosynthetic process;6.35319431321096e-09!GO:0006364;rRNA processing;7.07004694321233e-09!GO:0045333;cellular respiration;8.16602721192745e-09!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;8.39998431709627e-09!GO:0043038;amino acid activation;9.89817418432962e-09!GO:0006418;tRNA aminoacylation for protein translation;9.89817418432962e-09!GO:0043039;tRNA aminoacylation;9.89817418432962e-09!GO:0009150;purine ribonucleotide metabolic process;9.91196197643508e-09!GO:0051028;mRNA transport;9.99531092419362e-09!GO:0006164;purine nucleotide biosynthetic process;1.01813978463999e-08!GO:0016881;acid-amino acid ligase activity;1.0954095605393e-08!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;1.0954095605393e-08!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;1.10693700859503e-08!GO:0016072;rRNA metabolic process;1.26717663974429e-08!GO:0009260;ribonucleotide biosynthetic process;1.55505025445057e-08!GO:0015986;ATP synthesis coupled proton transport;1.8385779730596e-08!GO:0015985;energy coupled proton transport, down electrochemical gradient;1.8385779730596e-08!GO:0005839;proteasome core complex (sensu Eukaryota);2.13086752038126e-08!GO:0030532;small nuclear ribonucleoprotein complex;2.18549275858988e-08!GO:0009199;ribonucleoside triphosphate metabolic process;2.76644200364347e-08!GO:0008026;ATP-dependent helicase activity;2.89090730136617e-08!GO:0003924;GTPase activity;3.2507703813021e-08!GO:0005667;transcription factor complex;3.48454029557904e-08!GO:0006888;ER to Golgi vesicle-mediated transport;3.59488691067842e-08!GO:0048523;negative regulation of cellular process;4.10564997745003e-08!GO:0009141;nucleoside triphosphate metabolic process;4.26366683805195e-08!GO:0005768;endosome;4.37528931809636e-08!GO:0009152;purine ribonucleotide biosynthetic process;4.37528931809636e-08!GO:0006325;establishment and/or maintenance of chromatin architecture;4.51473911602595e-08!GO:0006261;DNA-dependent DNA replication;4.89959311698404e-08!GO:0019222;regulation of metabolic process;4.93701490732382e-08!GO:0016607;nuclear speck;5.08089596203508e-08!GO:0009205;purine ribonucleoside triphosphate metabolic process;5.79063823592387e-08!GO:0009144;purine nucleoside triphosphate metabolic process;5.79063823592387e-08!GO:0046034;ATP metabolic process;5.91395074581235e-08!GO:0016469;proton-transporting two-sector ATPase complex;6.40622265632002e-08!GO:0050789;regulation of biological process;6.87106919395992e-08!GO:0015078;hydrogen ion transmembrane transporter activity;7.12963418653579e-08!GO:0019829;cation-transporting ATPase activity;7.38780143530669e-08!GO:0065004;protein-DNA complex assembly;1.04212967513678e-07!GO:0009142;nucleoside triphosphate biosynthetic process;1.22250410435192e-07!GO:0009201;ribonucleoside triphosphate biosynthetic process;1.22250410435192e-07!GO:0006323;DNA packaging;1.28440794845885e-07!GO:0005788;endoplasmic reticulum lumen;1.55061056336665e-07!GO:0043566;structure-specific DNA binding;1.55061056336665e-07!GO:0009108;coenzyme biosynthetic process;1.67529561309695e-07!GO:0043067;regulation of programmed cell death;1.71320076237499e-07!GO:0042981;regulation of apoptosis;1.73534872653847e-07!GO:0003697;single-stranded DNA binding;1.78221413077009e-07!GO:0006099;tricarboxylic acid cycle;1.87052667786157e-07!GO:0046356;acetyl-CoA catabolic process;1.87052667786157e-07!GO:0016779;nucleotidyltransferase activity;1.87180427227499e-07!GO:0004298;threonine endopeptidase activity;1.99539701252991e-07!GO:0006754;ATP biosynthetic process;2.02161061852451e-07!GO:0006753;nucleoside phosphate metabolic process;2.02161061852451e-07!GO:0030120;vesicle coat;2.33321480367931e-07!GO:0030662;coated vesicle membrane;2.33321480367931e-07!GO:0009117;nucleotide metabolic process;2.33495615969871e-07!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;2.58098713730969e-07!GO:0009145;purine nucleoside triphosphate biosynthetic process;2.58098713730969e-07!GO:0015630;microtubule cytoskeleton;3.03775479712771e-07!GO:0043623;cellular protein complex assembly;3.60769250642834e-07!GO:0009109;coenzyme catabolic process;3.62182508319177e-07!GO:0051187;cofactor catabolic process;4.78849177060252e-07!GO:0005525;GTP binding;4.88256085510944e-07!GO:0006084;acetyl-CoA metabolic process;4.92706684792771e-07!GO:0000314;organellar small ribosomal subunit;4.94451768425118e-07!GO:0005763;mitochondrial small ribosomal subunit;4.94451768425118e-07!GO:0032446;protein modification by small protein conjugation;5.00808136164005e-07!GO:0006752;group transfer coenzyme metabolic process;5.95824970605123e-07!GO:0048475;coated membrane;7.36203428821996e-07!GO:0030117;membrane coat;7.36203428821996e-07!GO:0051170;nuclear import;7.38666220229619e-07!GO:0016567;protein ubiquitination;7.940436495158e-07!GO:0005773;vacuole;1.08319809291252e-06!GO:0000785;chromatin;1.16462424071625e-06!GO:0006606;protein import into nucleus;1.23753273929355e-06!GO:0048519;negative regulation of biological process;1.57833457960041e-06!GO:0045259;proton-transporting ATP synthase complex;1.9646383360437e-06!GO:0043069;negative regulation of programmed cell death;2.06573738675275e-06!GO:0044431;Golgi apparatus part;2.47375522237582e-06!GO:0051246;regulation of protein metabolic process;3.59491124106758e-06!GO:0006333;chromatin assembly or disassembly;3.64273145332385e-06!GO:0043066;negative regulation of apoptosis;3.91849134216269e-06!GO:0005762;mitochondrial large ribosomal subunit;4.03623679168696e-06!GO:0000315;organellar large ribosomal subunit;4.03623679168696e-06!GO:0006357;regulation of transcription from RNA polymerase II promoter;4.34951715760023e-06!GO:0016563;transcription activator activity;4.65803807987964e-06!GO:0003713;transcription coactivator activity;5.1786455762907e-06!GO:0016787;hydrolase activity;5.46036145629673e-06!GO:0016568;chromatin modification;5.9498646946198e-06!GO:0005813;centrosome;5.9808871486299e-06!GO:0006613;cotranslational protein targeting to membrane;6.24827924387421e-06!GO:0015077;monovalent inorganic cation transmembrane transporter activity;6.70119937493047e-06!GO:0005798;Golgi-associated vesicle;7.12884117214273e-06!GO:0031323;regulation of cellular metabolic process;7.44078166621577e-06!GO:0003714;transcription corepressor activity;7.83697454903795e-06!GO:0000323;lytic vacuole;8.0500790870985e-06!GO:0005764;lysosome;8.0500790870985e-06!GO:0005657;replication fork;8.52820127733095e-06!GO:0000245;spliceosome assembly;8.61338202277771e-06!GO:0032561;guanyl ribonucleotide binding;8.74855633268322e-06!GO:0019001;guanyl nucleotide binding;8.74855633268322e-06!GO:0016740;transferase activity;8.92631537696271e-06!GO:0005770;late endosome;9.05861914905293e-06!GO:0006916;anti-apoptosis;1.07654248637478e-05!GO:0051168;nuclear export;1.13540410307072e-05!GO:0051427;hormone receptor binding;1.16735838322858e-05!GO:0016564;transcription repressor activity;1.18430493543757e-05!GO:0051329;interphase of mitotic cell cycle;1.48161033098862e-05!GO:0005819;spindle;1.51565054190526e-05!GO:0051325;interphase;1.82952001487557e-05!GO:0006350;transcription;2.01190342276994e-05!GO:0045786;negative regulation of progression through cell cycle;2.13023014221256e-05!GO:0005815;microtubule organizing center;2.17257029236445e-05!GO:0031324;negative regulation of cellular metabolic process;2.22286087527776e-05!GO:0006839;mitochondrial transport;2.34441706455508e-05!GO:0035257;nuclear hormone receptor binding;2.48396515101413e-05!GO:0016023;cytoplasmic membrane-bound vesicle;2.56309725137889e-05!GO:0031988;membrane-bound vesicle;2.59713212840584e-05!GO:0044440;endosomal part;3.1596079744951e-05!GO:0010008;endosome membrane;3.1596079744951e-05!GO:0016491;oxidoreductase activity;3.25639550491141e-05!GO:0031202;RNA splicing factor activity, transesterification mechanism;3.38144450576266e-05!GO:0000151;ubiquitin ligase complex;3.43249520590259e-05!GO:0015980;energy derivation by oxidation of organic compounds;3.51313075117895e-05!GO:0031982;vesicle;4.02803485997312e-05!GO:0030867;rough endoplasmic reticulum membrane;4.20457665675957e-05!GO:0006793;phosphorus metabolic process;4.33735237265766e-05!GO:0006796;phosphate metabolic process;4.33735237265766e-05!GO:0003724;RNA helicase activity;4.78853731337837e-05!GO:0051789;response to protein stimulus;4.79924337352892e-05!GO:0006986;response to unfolded protein;4.79924337352892e-05!GO:0045454;cell redox homeostasis;4.79924337352892e-05!GO:0003899;DNA-directed RNA polymerase activity;4.93129975991272e-05!GO:0016859;cis-trans isomerase activity;5.11754147506255e-05!GO:0000775;chromosome, pericentric region;5.26419223545257e-05!GO:0031410;cytoplasmic vesicle;5.34134302987974e-05!GO:0006091;generation of precursor metabolites and energy;5.41908443193892e-05!GO:0007249;I-kappaB kinase/NF-kappaB cascade;5.97188990107671e-05!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;6.09464712393552e-05!GO:0043021;ribonucleoprotein binding;6.21207666610291e-05!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;6.58653487862096e-05!GO:0008654;phospholipid biosynthetic process;6.58653487862096e-05!GO:0000075;cell cycle checkpoint;7.16496502791136e-05!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;7.47620649585388e-05!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.000107587725144517!GO:0008033;tRNA processing;0.000108362936442998!GO:0031252;leading edge;0.000108614957426654!GO:0006612;protein targeting to membrane;0.000114524031337653!GO:0016853;isomerase activity;0.000134662937001387!GO:0000139;Golgi membrane;0.0001391768700201!GO:0010468;regulation of gene expression;0.000198970323625448!GO:0043681;protein import into mitochondrion;0.000200030353444933!GO:0019219;regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.000202235570671367!GO:0004576;oligosaccharyl transferase activity;0.000215454302042418!GO:0009892;negative regulation of metabolic process;0.000222371041270039!GO:0008094;DNA-dependent ATPase activity;0.00023739210100414!GO:0006891;intra-Golgi vesicle-mediated transport;0.000245132363168555!GO:0033116;ER-Golgi intermediate compartment membrane;0.000254799750863036!GO:0008250;oligosaccharyl transferase complex;0.000256593777363735!GO:0006352;transcription initiation;0.000259327236107215!GO:0007006;mitochondrial membrane organization and biogenesis;0.000308040582708081!GO:0008361;regulation of cell size;0.000316155715990798!GO:0032774;RNA biosynthetic process;0.000316329428848595!GO:0006383;transcription from RNA polymerase III promoter;0.000322659324496855!GO:0005048;signal sequence binding;0.000335934135057117!GO:0016272;prefoldin complex;0.000354070290832762!GO:0016310;phosphorylation;0.000367933947050163!GO:0019899;enzyme binding;0.000377506988616593!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.000377506988616593!GO:0006334;nucleosome assembly;0.000382404913087561!GO:0065007;biological regulation;0.000389273162514353!GO:0006351;transcription, DNA-dependent;0.000405905883648816!GO:0016049;cell growth;0.000419315177931464!GO:0048522;positive regulation of cellular process;0.000428349425668895!GO:0005885;Arp2/3 protein complex;0.000429369310727541!GO:0006626;protein targeting to mitochondrion;0.000470065901187341!GO:0007051;spindle organization and biogenesis;0.000472514010600781!GO:0009165;nucleotide biosynthetic process;0.000474807230550757!GO:0000059;protein import into nucleus, docking;0.000494569663645439!GO:0006302;double-strand break repair;0.00049717275364124!GO:0003690;double-stranded DNA binding;0.000521008847959554!GO:0046474;glycerophospholipid biosynthetic process;0.000527802515835559!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000527802515835559!GO:0006414;translational elongation;0.000527802515835559!GO:0000049;tRNA binding;0.000592930672753545!GO:0016772;transferase activity, transferring phosphorus-containing groups;0.0005953750388424!GO:0016481;negative regulation of transcription;0.000645639770721646!GO:0031497;chromatin assembly;0.000646006393989455!GO:0030663;COPI coated vesicle membrane;0.000670079699807542!GO:0030126;COPI vesicle coat;0.000670079699807542!GO:0031072;heat shock protein binding;0.000677320929918605!GO:0048471;perinuclear region of cytoplasm;0.000679917893182365!GO:0005769;early endosome;0.000693768378532536!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.000703028211916275!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.000715181750316984!GO:0051920;peroxiredoxin activity;0.000765663512787869!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.000775737651381419!GO:0008186;RNA-dependent ATPase activity;0.000802945206149572!GO:0030133;transport vesicle;0.000860326778655756!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000877613830421894!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.000882157206721511!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.000882157206721511!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.000882157206721511!GO:0030880;RNA polymerase complex;0.00089580021841202!GO:0048500;signal recognition particle;0.000909759917821324!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.000915791401436893!GO:0030137;COPI-coated vesicle;0.000918229221642571!GO:0001558;regulation of cell growth;0.00100343895603115!GO:0005791;rough endoplasmic reticulum;0.00104539518933783!GO:0003682;chromatin binding;0.00106015686431947!GO:0016251;general RNA polymerase II transcription factor activity;0.00108013734324571!GO:0046489;phosphoinositide biosynthetic process;0.00109839541302593!GO:0046483;heterocycle metabolic process;0.00110947566277374!GO:0006611;protein export from nucleus;0.00118240553054368!GO:0005684;U2-dependent spliceosome;0.00118240553054368!GO:0007088;regulation of mitosis;0.00119561325828695!GO:0018196;peptidyl-asparagine modification;0.00121045512409321!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.00121045512409321!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.00124741029830459!GO:0015399;primary active transmembrane transporter activity;0.00124741029830459!GO:0005852;eukaryotic translation initiation factor 3 complex;0.00127314569069416!GO:0006520;amino acid metabolic process;0.00128574671358836!GO:0005905;coated pit;0.00132121951998811!GO:0051087;chaperone binding;0.00134758848576461!GO:0007243;protein kinase cascade;0.00141235025403231!GO:0003729;mRNA binding;0.00154578418098843!GO:0043284;biopolymer biosynthetic process;0.00174180662945578!GO:0051052;regulation of DNA metabolic process;0.00178894380578985!GO:0016741;transferase activity, transferring one-carbon groups;0.00180529785753958!GO:0016363;nuclear matrix;0.00184014563002403!GO:0000776;kinetochore;0.00184775899853186!GO:0008168;methyltransferase activity;0.00193268592242536!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.00195002829784319!GO:0000428;DNA-directed RNA polymerase complex;0.00195002829784319!GO:0008139;nuclear localization sequence binding;0.00199705595805578!GO:0006818;hydrogen transport;0.00206728658130373!GO:0006402;mRNA catabolic process;0.00211082726371938!GO:0005774;vacuolar membrane;0.00212109756320777!GO:0048487;beta-tubulin binding;0.00213830881013273!GO:0046983;protein dimerization activity;0.00214112617638778!GO:0005874;microtubule;0.00215592926697091!GO:0003702;RNA polymerase II transcription factor activity;0.00217655072992853!GO:0008312;7S RNA binding;0.00221218954793394!GO:0004004;ATP-dependent RNA helicase activity;0.00221356291435607!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00221356291435607!GO:0045047;protein targeting to ER;0.00221356291435607!GO:0015992;proton transport;0.00239979699804418!GO:0003684;damaged DNA binding;0.00257615876449373!GO:0045449;regulation of transcription;0.00260977206838209!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.0026667319911047!GO:0045045;secretory pathway;0.00295664151203983!GO:0043596;nuclear replication fork;0.00300159699012351!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00303177685712429!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00303177685712429!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.00303191650292514!GO:0009116;nucleoside metabolic process;0.00307118178966282!GO:0005637;nuclear inner membrane;0.00308390616216478!GO:0032508;DNA duplex unwinding;0.00322304481586108!GO:0032392;DNA geometric change;0.00322304481586108!GO:0044262;cellular carbohydrate metabolic process;0.00343738730690789!GO:0006310;DNA recombination;0.00344303080892443!GO:0030176;integral to endoplasmic reticulum membrane;0.00347812961429845!GO:0003746;translation elongation factor activity;0.00348317423319242!GO:0007050;cell cycle arrest;0.00348759090993677!GO:0016197;endosome transport;0.00350766516909382!GO:0006405;RNA export from nucleus;0.00351405873518431!GO:0007093;mitotic cell cycle checkpoint;0.00356846594760814!GO:0003678;DNA helicase activity;0.00364860019617312!GO:0019752;carboxylic acid metabolic process;0.00366766469129826!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.00376801922763433!GO:0019843;rRNA binding;0.00384517070094768!GO:0022890;inorganic cation transmembrane transporter activity;0.00410354313273101!GO:0019867;outer membrane;0.00412560829214939!GO:0051540;metal cluster binding;0.0042379039971549!GO:0051536;iron-sulfur cluster binding;0.0042379039971549!GO:0000096;sulfur amino acid metabolic process;0.00423924064879996!GO:0031968;organelle outer membrane;0.00427057806952271!GO:0044452;nucleolar part;0.00429375195045277!GO:0003711;transcription elongation regulator activity;0.00449558367197302!GO:0005669;transcription factor TFIID complex;0.00449848385516632!GO:0006082;organic acid metabolic process;0.00454972089278395!GO:0030658;transport vesicle membrane;0.00457123813762541!GO:0006650;glycerophospholipid metabolic process;0.00480282343943303!GO:0046966;thyroid hormone receptor binding;0.00498427660562906!GO:0051539;4 iron, 4 sulfur cluster binding;0.00508686864495711!GO:0015631;tubulin binding;0.00510296198963757!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.00516552065852116!GO:0015002;heme-copper terminal oxidase activity;0.00516552065852116!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.00516552065852116!GO:0004129;cytochrome-c oxidase activity;0.00516552065852116!GO:0035258;steroid hormone receptor binding;0.00534303592649997!GO:0007010;cytoskeleton organization and biogenesis;0.00536214131232128!GO:0016044;membrane organization and biogenesis;0.00558585858595467!GO:0042802;identical protein binding;0.00562674495980294!GO:0044437;vacuolar part;0.00562935675143255!GO:0006270;DNA replication initiation;0.0056746155335861!GO:0004527;exonuclease activity;0.00568169467180331!GO:0005876;spindle microtubule;0.00581759679735986!GO:0005765;lysosomal membrane;0.00582817158885328!GO:0006401;RNA catabolic process;0.00624169745007195!GO:0002474;antigen processing and presentation of peptide antigen via MHC class I;0.00627277292411924!GO:0007040;lysosome organization and biogenesis;0.00627969201060374!GO:0005665;DNA-directed RNA polymerase II, core complex;0.00681856414853008!GO:0051252;regulation of RNA metabolic process;0.00690892444827943!GO:0030132;clathrin coat of coated pit;0.0075768986172845!GO:0046982;protein heterodimerization activity;0.00764787268817575!GO:0003677;DNA binding;0.00765895735109752!GO:0045893;positive regulation of transcription, DNA-dependent;0.00791289365831048!GO:0000082;G1/S transition of mitotic cell cycle;0.00793772756535004!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.00811381178351772!GO:0006355;regulation of transcription, DNA-dependent;0.00819295066224009!GO:0007033;vacuole organization and biogenesis;0.00820037211479456!GO:0006268;DNA unwinding during replication;0.0082129700375306!GO:0048468;cell development;0.0082129700375306!GO:0030118;clathrin coat;0.00847338721844817!GO:0005741;mitochondrial outer membrane;0.0086877752042996!GO:0030660;Golgi-associated vesicle membrane;0.00883991871969743!GO:0007021;tubulin folding;0.00903469409834606!GO:0030134;ER to Golgi transport vesicle;0.00936844247715227!GO:0006595;polyamine metabolic process;0.00971882829171958!GO:0006892;post-Golgi vesicle-mediated transport;0.0097622376147721!GO:0009112;nucleobase metabolic process;0.00987184319610836!GO:0043022;ribosome binding;0.0099568514105632!GO:0043065;positive regulation of apoptosis;0.0101940414457136!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.0102096170145257!GO:0005869;dynactin complex;0.0105553104723463!GO:0008287;protein serine/threonine phosphatase complex;0.0106724177116063!GO:0006506;GPI anchor biosynthetic process;0.010900040182014!GO:0043601;nuclear replisome;0.0109927611052572!GO:0030894;replisome;0.0109927611052572!GO:0006275;regulation of DNA replication;0.0110724973881224!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.0110765957316586!GO:0040008;regulation of growth;0.0111052276136203!GO:0001726;ruffle;0.0112186509931196!GO:0031902;late endosome membrane;0.0112919898750822!GO:0051287;NAD binding;0.0113771404459099!GO:0007007;inner mitochondrial membrane organization and biogenesis;0.0115267926006191!GO:0043492;ATPase activity, coupled to movement of substances;0.0115661502736662!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.0117126306887429!GO:0008180;signalosome;0.0117186341965086!GO:0031970;organelle envelope lumen;0.0117434072423523!GO:0006979;response to oxidative stress;0.012308477159523!GO:0005832;chaperonin-containing T-complex;0.0124032799578848!GO:0045892;negative regulation of transcription, DNA-dependent;0.0124087343549021!GO:0045941;positive regulation of transcription;0.012570145982856!GO:0032981;mitochondrial respiratory chain complex I assembly;0.0129499867265305!GO:0010257;NADH dehydrogenase complex assembly;0.0129499867265305!GO:0033108;mitochondrial respiratory chain complex assembly;0.0129499867265305!GO:0043068;positive regulation of programmed cell death;0.0130344786812945!GO:0005758;mitochondrial intermembrane space;0.0130469995016872!GO:0045792;negative regulation of cell size;0.0133636909250614!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.0138040029448991!GO:0006509;membrane protein ectodomain proteolysis;0.0141852892028282!GO:0033619;membrane protein proteolysis;0.0141852892028282!GO:0030308;negative regulation of cell growth;0.0145385287495134!GO:0030127;COPII vesicle coat;0.0145385287495134!GO:0012507;ER to Golgi transport vesicle membrane;0.0145385287495134!GO:0043624;cellular protein complex disassembly;0.0145385287495134!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.0151021991761367!GO:0006505;GPI anchor metabolic process;0.0151021991761367!GO:0006497;protein amino acid lipidation;0.0154383107125502!GO:0006284;base-excision repair;0.0155161918369565!GO:0051059;NF-kappaB binding;0.0156230597707556!GO:0006984;ER-nuclear signaling pathway;0.0162813194729335!GO:0017166;vinculin binding;0.0163484931491492!GO:0032984;macromolecular complex disassembly;0.0165603561116376!GO:0046467;membrane lipid biosynthetic process;0.0168645097370353!GO:0007052;mitotic spindle organization and biogenesis;0.0171695884003959!GO:0030384;phosphoinositide metabolic process;0.0176412243025659!GO:0030036;actin cytoskeleton organization and biogenesis;0.0177923549858086!GO:0003923;GPI-anchor transamidase activity;0.0178223815488339!GO:0016255;attachment of GPI anchor to protein;0.0178223815488339!GO:0042765;GPI-anchor transamidase complex;0.0178223815488339!GO:0008601;protein phosphatase type 2A regulator activity;0.0187718058479957!GO:0030521;androgen receptor signaling pathway;0.0188603912019609!GO:0042158;lipoprotein biosynthetic process;0.0191692163382983!GO:0008092;cytoskeletal protein binding;0.0192580196183131!GO:0016584;nucleosome positioning;0.0194896296870183!GO:0000226;microtubule cytoskeleton organization and biogenesis;0.0195672715833705!GO:0006519;amino acid and derivative metabolic process;0.0195672715833705!GO:0004674;protein serine/threonine kinase activity;0.0201305062086476!GO:0031124;mRNA 3'-end processing;0.0201923329968873!GO:0043488;regulation of mRNA stability;0.0201923329968873!GO:0043487;regulation of RNA stability;0.0201923329968873!GO:0006378;mRNA polyadenylation;0.0206514570883456!GO:0000178;exosome (RNase complex);0.0206810611608955!GO:0006144;purine base metabolic process;0.0207586791035089!GO:0004518;nuclease activity;0.0207586791035089!GO:0042770;DNA damage response, signal transduction;0.0211379230838597!GO:0050811;GABA receptor binding;0.021257439558506!GO:0016281;eukaryotic translation initiation factor 4F complex;0.0213832458402326!GO:0016706;oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors;0.0213891716276694!GO:0008632;apoptotic program;0.0220558034088082!GO:0006607;NLS-bearing substrate import into nucleus;0.0222310413773639!GO:0006289;nucleotide-excision repair;0.0224138579181333!GO:0008538;proteasome activator activity;0.0226615346945886!GO:0030659;cytoplasmic vesicle membrane;0.0226615346945886!GO:0006367;transcription initiation from RNA polymerase II promoter;0.0233507763136439!GO:0032940;secretion by cell;0.0233578134043084!GO:0000287;magnesium ion binding;0.0238550354466984!GO:0004448;isocitrate dehydrogenase activity;0.0239083313729226!GO:0000792;heterochromatin;0.0241717744948854!GO:0022411;cellular component disassembly;0.0243727666381282!GO:0016407;acetyltransferase activity;0.024437111314923!GO:0043241;protein complex disassembly;0.0248457465376608!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.0254422076368466!GO:0047485;protein N-terminus binding;0.0262051421492579!GO:0007059;chromosome segregation;0.0262204805476158!GO:0031418;L-ascorbic acid binding;0.026369120898293!GO:0000159;protein phosphatase type 2A complex;0.0266078433320759!GO:0030125;clathrin vesicle coat;0.0268041843665089!GO:0030665;clathrin coated vesicle membrane;0.0268041843665089!GO:0000086;G2/M transition of mitotic cell cycle;0.0269024025442686!GO:0046979;TAP2 binding;0.0269152560280918!GO:0046977;TAP binding;0.0269152560280918!GO:0046978;TAP1 binding;0.0269152560280918!GO:0019783;small conjugating protein-specific protease activity;0.0270755080054054!GO:0003756;protein disulfide isomerase activity;0.0271285809065296!GO:0016864;intramolecular oxidoreductase activity, transposing S-S bonds;0.0271285809065296!GO:0006950;response to stress;0.0273231286633187!GO:0032507;maintenance of cellular protein localization;0.027649775245919!GO:0032200;telomere organization and biogenesis;0.027840747507047!GO:0000723;telomere maintenance;0.027840747507047!GO:0065009;regulation of a molecular function;0.02804457818442!GO:0016791;phosphoric monoester hydrolase activity;0.0280472642825188!GO:0030518;steroid hormone receptor signaling pathway;0.0283056504882577!GO:0008637;apoptotic mitochondrial changes;0.0283587399556734!GO:0008234;cysteine-type peptidase activity;0.0289613956253695!GO:0051101;regulation of DNA binding;0.029451518749183!GO:0031529;ruffle organization and biogenesis;0.0296278659591359!GO:0016627;oxidoreductase activity, acting on the CH-CH group of donors;0.0300716618559274!GO:0016667;oxidoreductase activity, acting on sulfur group of donors;0.0301886426845247!GO:0042719;mitochondrial intermembrane space protein transporter complex;0.0308620265185501!GO:0045039;protein import into mitochondrial inner membrane;0.0308620265185501!GO:0007034;vacuolar transport;0.0309506344699425!GO:0004843;ubiquitin-specific protease activity;0.0312074555292224!GO:0000910;cytokinesis;0.0314788199972307!GO:0030330;DNA damage response, signal transduction by p53 class mediator;0.0314788199972307!GO:0030508;thiol-disulfide exchange intermediate activity;0.0318709275883776!GO:0000228;nuclear chromosome;0.0319293986029367!GO:0006807;nitrogen compound metabolic process;0.0319351947742758!GO:0008022;protein C-terminus binding;0.0341462131644351!GO:0000209;protein polyubiquitination;0.0348064873548703!GO:0045926;negative regulation of growth;0.0348728769321017!GO:0008408;3'-5' exonuclease activity;0.0349904377549778!GO:0004532;exoribonuclease activity;0.0350264697556929!GO:0016896;exoribonuclease activity, producing 5'-phosphomonoesters;0.0350264697556929!GO:0050662;coenzyme binding;0.0353597217987525!GO:0046519;sphingoid metabolic process;0.0354586816649942!GO:0031901;early endosome membrane;0.0357801826261201!GO:0008652;amino acid biosynthetic process;0.0359816438792421!GO:0016790;thiolester hydrolase activity;0.0360633179813935!GO:0009308;amine metabolic process;0.0361743206477777!GO:0016893;endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters;0.0361743206477777!GO:0031625;ubiquitin protein ligase binding;0.0363248892355466!GO:0006564;L-serine biosynthetic process;0.0363537557057616!GO:0008320;protein transmembrane transporter activity;0.0365324190714046!GO:0048518;positive regulation of biological process;0.0368502708641179!GO:0006100;tricarboxylic acid cycle intermediate metabolic process;0.0371314110485473!GO:0030119;AP-type membrane coat adaptor complex;0.0373291354270538!GO:0045936;negative regulation of phosphate metabolic process;0.0373383945523873!GO:0006672;ceramide metabolic process;0.0374756134031786!GO:0005862;muscle thin filament tropomyosin;0.0375050825529843!GO:0006338;chromatin remodeling;0.0377328646477881!GO:0000922;spindle pole;0.0377389840384389!GO:0042393;histone binding;0.0377389840384389!GO:0008757;S-adenosylmethionine-dependent methyltransferase activity;0.0377389840384389!GO:0043189;H4/H2A histone acetyltransferase complex;0.0378352827156418!GO:0008536;Ran GTPase binding;0.03784386448149!GO:0004185;serine carboxypeptidase activity;0.0380018710463973!GO:0030503;regulation of cell redox homeostasis;0.0380504343093738!GO:0051098;regulation of binding;0.0382022955996586!GO:0007017;microtubule-based process;0.039015363839282!GO:0006376;mRNA splice site selection;0.0392152721670736!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0392152721670736!GO:0046822;regulation of nucleocytoplasmic transport;0.0392306656773556!GO:0016891;endoribonuclease activity, producing 5'-phosphomonoesters;0.0393449013999824!GO:0006740;NADPH regeneration;0.0395835643537496!GO:0006098;pentose-phosphate shunt;0.0395835643537496!GO:0050681;androgen receptor binding;0.0401845777138537!GO:0017134;fibroblast growth factor binding;0.0402741618825051!GO:0045185;maintenance of protein localization;0.0415056108021966!GO:0031628;opioid receptor binding;0.0415056108021966!GO:0031852;mu-type opioid receptor binding;0.0415056108021966!GO:0009451;RNA modification;0.0415283361468461!GO:0043130;ubiquitin binding;0.042891693634718!GO:0032182;small conjugating protein binding;0.042891693634718!GO:0008475;procollagen-lysine 5-dioxygenase activity;0.0439170265814264!GO:0044433;cytoplasmic vesicle part;0.0440427602006925!GO:0019206;nucleoside kinase activity;0.0441969222016285!GO:0007030;Golgi organization and biogenesis;0.0441969222016285!GO:0009066;aspartate family amino acid metabolic process;0.0443232741496545!GO:0030140;trans-Golgi network transport vesicle;0.0446132854203115!GO:0004722;protein serine/threonine phosphatase activity;0.0446132854203115!GO:0006778;porphyrin metabolic process;0.0446132854203115!GO:0033013;tetrapyrrole metabolic process;0.0446132854203115!GO:0050178;phenylpyruvate tautomerase activity;0.0446689431193344!GO:0004221;ubiquitin thiolesterase activity;0.0457018405059701!GO:0046128;purine ribonucleoside metabolic process;0.0457879975020948!GO:0042278;purine nucleoside metabolic process;0.0457879975020948!GO:0030496;midbody;0.0462891389613793!GO:0045736;negative regulation of cyclin-dependent protein kinase activity;0.0462891389613793!GO:0006007;glucose catabolic process;0.0462891389613793!GO:0033673;negative regulation of kinase activity;0.0469366988065541!GO:0006469;negative regulation of protein kinase activity;0.0469366988065541!GO:0031570;DNA integrity checkpoint;0.0471974278877319!GO:0005663;DNA replication factor C complex;0.0471974278877319!GO:0000123;histone acetyltransferase complex;0.0471974278877319!GO:0005583;fibrillar collagen;0.0476189271516856!GO:0009119;ribonucleoside metabolic process;0.0481545821493472!GO:0005784;translocon complex;0.0481545821493472!GO:0004192;cathepsin D activity;0.0484541805636943!GO:0030433;ER-associated protein catabolic process;0.0491761688384565!GO:0006515;misfolded or incompletely synthesized protein catabolic process;0.0491761688384565!GO:0000786;nucleosome;0.0495574490374818!GO:0051651;maintenance of cellular localization;0.0495798844482502!GO:0030911;TPR domain binding;0.0497565943511985
|sample_id=10689
|sample_note=
|sample_sex=female
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_tissue=endometrium
|top_motifs=AIRE:2.46406381048;TEF:2.22460480677;UFEwm:1.98645623338;ZBTB16:1.76116802501;EVI1:1.72999033084;RXR{A,B,G}:1.45336756001;HMGA1,2:1.45281619548;ZNF384:1.42207990556;FOXD3:1.39944911757;NKX3-1:1.38775652914;PAX4:1.2842688278;NR6A1:1.22232657954;IKZF2:1.18616498846;FOXL1:1.1331056798;POU1F1:1.13149075159;LHX3,4:1.04675766946;CDX1,2,4:0.894956105088;HOX{A4,D4}:0.884944399121;EN1,2:0.866985625026;IKZF1:0.808925620439;ONECUT1,2:0.768334049408;HOXA9_MEIS1:0.766086069903;RBPJ:0.751094815584;NKX2-2,8:0.724431336523;FOXP1:0.690023625308;IRF1,2:0.65965250967;NKX6-1,2:0.635178995677;ALX4:0.628911313958;PITX1..3:0.605431513478;bHLH_family:0.571914001666;TAL1_TCF{3,4,12}:0.541934054781;FOXP3:0.529681338711;NR5A1,2:0.506318291632;NKX2-1,4:0.469443922051;NFE2L1:0.433305903628;NFIX:0.420192720073;CDC5L:0.418391410253;NKX3-2:0.41736239108;E2F1..5:0.405151700389;SRF:0.396065535521;POU6F1:0.387054887244;TOPORS:0.377629713289;HIF1A:0.360409785464;POU3F1..4:0.339312812687;ARID5B:0.323558495467;NR3C1:0.320297548042;NFY{A,B,C}:0.319851637384;ELK1,4_GABP{A,B1}:0.297426980291;ZNF423:0.254994562744;IRF7:0.243897856389;ZNF143:0.241710384569;ZIC1..3:0.238065613427;RORA:0.215883959316;LMO2:0.198099253101;MAFB:0.182799839349;TBX4,5:0.167698243205;OCT4_SOX2{dimer}:0.162078952884;GATA4:0.159954824652;NKX2-3_NKX2-5:0.155852642715;ATF4:0.146980360645;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.145484024397;ESR1:0.13087381337;NANOG{mouse}:0.127175021988;NFE2L2:0.122280224887;HOX{A6,A7,B6,B7}:0.118580602967;HLF:0.118047152853;PAX3,7:0.116834630166;HBP1_HMGB_SSRP1_UBTF:0.0899524444475;GFI1B:0.0784544440672;STAT2,4,6:0.0752843695607;PAX8:0.0660644474241;POU5F1:0.0599642186543;ALX1:0.0580545351368;TFAP4:0.0457689190643;ZBTB6:0.0453737326406;NRF1:0.0443176704895;DMAP1_NCOR{1,2}_SMARC:0.0116198358763;MYB:0.0062401738708;RXRA_VDR{dimer}:0.00558849504161;GLI1..3:-0.0106152279139;T:-0.0480866779902;TFDP1:-0.0529209941613;PRDM1:-0.0783833175326;SREBF1,2:-0.0863296063045;HES1:-0.0955932641085;TEAD1:-0.104920519289;CEBPA,B_DDIT3:-0.118582047609;REST:-0.12233448379;MTE{core}:-0.126613222528;BREu{core}:-0.130591310667;HOX{A5,B5}:-0.138435853869;GFI1:-0.170974791206;TLX1..3_NFIC{dimer}:-0.177433261736;NFKB1_REL_RELA:-0.180381805528;MYOD1:-0.204025349449;XBP1:-0.204260588849;YY1:-0.207647939397;MYBL2:-0.211865860533;RFX1:-0.214431902944;SOX17:-0.217573270161;KLF4:-0.221657921178;TFAP2B:-0.230104244276;FOXQ1:-0.238052652805;PPARG:-0.268339109671;HSF1,2:-0.275161527928;PAX5:-0.275402755976;RREB1:-0.278009820263;HIC1:-0.285559691681;TP53:-0.305637476114;HNF1A:-0.309990945502;ADNP_IRX_SIX_ZHX:-0.327361974446;SNAI1..3:-0.327845747692;DBP:-0.331077773647;CUX2:-0.331867487509;ZFP161:-0.337585994631;GTF2A1,2:-0.3433879753;PDX1:-0.347051000476;GTF2I:-0.348011633391;BACH2:-0.356696319931;VSX1,2:-0.358947483306;FOXO1,3,4:-0.365663469959;STAT1,3:-0.380865618417;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.395891580213;ATF6:-0.400874485912;ATF5_CREB3:-0.410322878312;STAT5{A,B}:-0.414080461938;HNF4A_NR2F1,2:-0.421498744843;ESRRA:-0.429567934063;RUNX1..3:-0.443033675813;POU2F1..3:-0.446856741455;PRRX1,2:-0.457795724305;MZF1:-0.463901170652;FOX{F1,F2,J1}:-0.466081530823;AHR_ARNT_ARNT2:-0.468234733411;PBX1:-0.472166707892;TFAP2{A,C}:-0.49517613582;MTF1:-0.512028232081;GCM1,2:-0.513257130325;FOSL2:-0.513302426834;SPIB:-0.52406077264;NFE2:-0.532765864128;PAX2:-0.539602375949;EBF1:-0.543486649284;MYFfamily:-0.549914166436;FOXA2:-0.559322579602;PAX1,9:-0.561413192105;FOS_FOS{B,L1}_JUN{B,D}:-0.562907748685;CREB1:-0.573621365127;SP1:-0.585955300608;TFCP2:-0.586512567914;CRX:-0.602262746801;NR1H4:-0.609972588023;FOXM1:-0.624242387224;SOX5:-0.626988692226;SPI1:-0.627129689282;PATZ1:-0.663346228821;NFIL3:-0.668833606506;GZF1:-0.678418479403;FOXN1:-0.681377103991;JUN:-0.707980858869;XCPE1{core}:-0.714150511862;BPTF:-0.727500685633;TBP:-0.753377903661;ZNF238:-0.755160936703;MEF2{A,B,C,D}:-0.776367946438;EGR1..3:-0.783814312627;PAX6:-0.790403515638;ATF2:-0.822560037802;MED-1{core}:-0.834189597798;GATA6:-0.835061201513;ELF1,2,4:-0.836197496799;SOX{8,9,10}:-0.859620325301;SMAD1..7,9:-0.897036248018;ZEB1:-0.921914155527;FOX{D1,D2}:-0.922912331323;ETS1,2:-0.926735427882;NHLH1,2:-0.941603848846;NFATC1..3:-1.04553514112;EP300:-1.05337756688;TLX2:-1.08220769818;RFX2..5_RFXANK_RFXAP:-1.08317508452;HAND1,2:-1.08668889592;SOX2:-1.09941941035;MAZ:-1.10204059978;LEF1_TCF7_TCF7L1,2:-1.11823732697;AR:-1.26993885706;HMX1:-1.28529990808;FOX{I1,J2}:-1.29684993325;TGIF1:-1.33297097664;ZNF148:-1.36910424184;SPZ1:-1.38137398549;NANOG:-1.54880376493
|xref=
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:10689-109F5;search_select_hide=table117:FF:10689-109F5
}}
}}

Latest revision as of 14:33, 3 June 2020

Name:mixed mullerian tumor cell line:HTMMT
Species:Human (Homo sapiens)
Library ID:CNhs11944
Sample type:cell lines
Genomic View: UCSC
RefEX:Specific genes
CAGEd-oPOSSUM:link
ZENBU report :link
Additional information
Sample information
strainNA
tissueendometrium
dev stageNA
sexfemale
age66
cell typeunclassifiable
cell lineHTMMT
companyRIKEN Bioresource centre
collaborationYukio Nakamura (RIKEN BRC)
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot numberNA
catalog numberNA
sample typetotal RNA
extraction protocol (Details)OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0

CAGE Accession numbers
MethodSample accession id
CAGE  SAMD00004901
Library accession numbers

Library idMethodExp. accession idRun accession id
CNhs11944 CAGE DRX007952 DRR008824
Accession ID Hg19

Library idBAMCTSS
CNhs11944 DRZ000249 DRZ001634
Accession ID Hg38

Library idBAMCTSS
CNhs11944 DRZ011599 DRZ012984
Download raw sequence, BAM & CTSS
Hg19
FastaBAMCTSS
downloaddownloaddonwload
Hg38
BAMCTSS
downloaddonwload


Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.



Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data

Coexpression clusterscore
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis0.256
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma0.215
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal0
C113-thyroid-throat-lung-lymph-small-colon-trachea0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD190
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils0
C120-immature-salivary-tongue-skin-cervical-CD14-CD340
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD40
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair0.123
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid0
C156-plasma-splenic-hereditary-B-large-xeroderma-b0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD40
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural-0.0337
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19-0.0387
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle0.242
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma0
C190-colon-small-rectum-duodenum-appendix-temporal-oral0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD40
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD140
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes0.472
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed0.964
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall0
C202-salivary-skin-penis-tongue-uterus-cervical-immature0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD340
C205-mycosis-cord-hairy-xeroderma-CD4-B-b0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD340
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD340
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD190
C220-Adipocyte-mature-left-breast-skin-liver-adipose0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte0.995
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart0.123
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD140
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF70
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus-0.0338
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory0
C247-pons-locus-medulla-spinal-paracentral-medial-occipital0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD40
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma0.123
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing0.123
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD80
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD40
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth0
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD40
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small0.188
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus0.518
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial0.123
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal0.219
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD340
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte0.518
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic0
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD1330
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H90
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic0.559
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate0.123
C72-skeletal-tongue-throat-heart-diaphragm-penis-left0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD80
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal0.297
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD340
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD340
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid0



Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data



TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs11944

Jaspar motifP-value
MA0002.20.832
MA0003.10.516
MA0004.10.34
MA0006.10.671
MA0007.10.265
MA0009.10.645
MA0014.10.726
MA0017.10.237
MA0018.20.00194
MA0019.10.313
MA0024.10.0824
MA0025.10.0187
MA0027.10.261
MA0028.10.473
MA0029.10.282
MA0030.10.00137
MA0031.10.00837
MA0035.20.0135
MA0038.10.214
MA0039.20.0155
MA0040.10.0259
MA0041.10.0584
MA0042.10.349
MA0043.18.97837e-4
MA0046.10.00285
MA0047.20.0229
MA0048.10.0124
MA0050.10.0522
MA0051.10.0434
MA0052.14.40443e-7
MA0055.10.0183
MA0057.10.764
MA0058.10.7
MA0059.10.0494
MA0060.10.835
MA0061.10.46
MA0062.20.118
MA0065.20.0741
MA0066.10.28
MA0067.10.503
MA0068.10.806
MA0069.10.415
MA0070.10.815
MA0071.10.22
MA0072.10.88
MA0073.10.841
MA0074.10.269
MA0076.10.508
MA0077.10.922
MA0078.10.551
MA0079.20.00247
MA0080.22.38249e-11
MA0081.10.0118
MA0083.10.614
MA0084.10.863
MA0087.10.113
MA0088.10.391
MA0090.10.969
MA0091.10.718
MA0092.10.703
MA0093.10.406
MA0099.21.81361e-9
MA0100.10.934
MA0101.10.119
MA0102.20.00289
MA0103.10.309
MA0104.20.386
MA0105.10.06
MA0106.10.925
MA0107.10.0316
MA0108.24.69578e-8
MA0111.10.399
MA0112.20.0196
MA0113.10.624
MA0114.10.862
MA0115.10.418
MA0116.10.112
MA0117.10.487
MA0119.10.0303
MA0122.10.391
MA0124.10.0203
MA0125.10.413
MA0131.10.91
MA0135.10.0188
MA0136.11.17171e-11
MA0137.20.0953
MA0138.20.876
MA0139.10.318
MA0140.10.0306
MA0141.10.169
MA0142.10.478
MA0143.10.987
MA0144.10.159
MA0145.10.139
MA0146.10.384
MA0147.10.186
MA0148.10.134
MA0149.10.115
MA0150.10.0469
MA0152.10.208
MA0153.10.543
MA0154.10.41
MA0155.10.85
MA0156.16.02672e-9
MA0157.10.222
MA0159.10.0487
MA0160.10.485
MA0162.10.153
MA0163.10.00161
MA0164.10.852
MA0258.10.0027
MA0259.10.165



FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs11944

Novel motifP-value
10.0625
100.0277
1000.0176
1010.784
1020.75
1030.291
1040.998
1050.00869
1060.746
1070.0568
1080.2
1090.242
110.266
1100.176
1110.00854
1120.98
1130.0078
1140.0977
1150.0092
1160.146
1170.0314
1180.367
1190.327
120.201
1200.512
1210.324
1220.142
1230.141
1240.453
1250.298
1260.718
1270.929
1280.725
1290.666
130.0235
1300.0731
1310.643
1320.757
1330.0674
1340.165
1350.0225
1360.0756
1370.188
1380.939
1390.991
140.407
1400.619
1410.18
1420.705
1430.514
1440.927
1450.624
1460.742
1470.131
1480.706
1490.688
150.247
1500.0569
1510.978
1520.258
1530.38
1540.689
1550.617
1560.858
1570.419
1580.0722
1590.225
160.0792
1600.743
1610.644
1620.0711
1630.71
1640.0705
1650.712
1660.349
1670.0359
1680.121
1690.821
170.877
180.128
190.135
20.226
200.144
210.144
220.455
230.644
240.946
250.588
260.0923
270.482
280.85
290.0645
30.445
300.209
310.531
326.14773e-7
330.082
340.45
350.121
360.265
370.0514
380.953
390.728
40.755
400.199
410.242
420.942
430.401
440.0976
450.142
460.242
470.102
480.215
490.584
50.944
500.862
510.8
520.57
530.314
540.76
550.278
560.596
570.223
580.469
590.665
60.437
600.749
610.255
620.886
630.281
640.217
650.771
660.569
670.224
680.806
690.365
70.971
700.37
710.0433
720.81
730.363
740.549
750.024
760.294
770.457
780.52
790.0979
80.0874
800.00905
810.299
820.845
830.858
840.817
850.709
860.775
870.0127
880.899
890.796
90.138
900.125
910.95
920.927
930.785
940.665
950.283
960.552
970.874
980.965
990.28



de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br> library id: CNhs11944


FANTOM5 (FF) ontology

Direct parent terms


Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data

DOID: Disease
4 (disease)
162 (cancer)
14566 (disease of cellular proliferation)
0050687 (cell type cancer)
154 (mixed cell type cancer)
4236 (carcinosarcoma)

UBERON: Anatomy
0000468 (multi-cellular organism)
0003134 (female reproductive organ)
0005156 (reproductive structure)
0000062 (organ)
0004120 (mesoderm-derived structure)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000990 (reproductive system)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0003133 (reproductive organ)
0010317 (germ layer / neural crest derived structure)
0003100 (female organism)
0000474 (female reproductive system)

FF: FANTOM5
0000102 (sample by type)
0000003 (cell line sample)
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)

Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
UBERON:0002532 (epiblast (generic))
UBERON:0006603 (presumptive mesoderm)
UBERON:0010316 (germ layer / neural crest)

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