FFCP PHASE1:Hg19::chr12:121584118..121584122,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_at_chr12:121584118..121584122,+ | |||
|id=chr12:121584118..121584122,+ | |||
|ontology_enrichment_celltype=CL:0002057!3.41e-40!42;CL:0000860!6.81e-39!45;CL:0002194!1.13e-34!63;CL:0000576!1.13e-34!63;CL:0000040!1.13e-34!63;CL:0000559!1.13e-34!63;CL:0002009!3.22e-33!65;CL:0000839!1.46e-31!70;CL:0000557!6.17e-31!71;CL:0000766!4.68e-28!76;CL:0000763!3.50e-18!112;CL:0000049!3.50e-18!112;CL:0002087!2.74e-16!119;CL:0002031!4.47e-14!124;CL:0000738!9.87e-13!140;CL:0000037!4.66e-10!172;CL:0000566!4.66e-10!172;CL:0002032!1.27e-09!165;CL:0000837!1.27e-09!165;CL:0000988!2.20e-09!182 | |||
|ontology_enrichment_celltype_v019=CL:0000860;6.86e-66;33!CL:0002057;6.86e-66;33!CL:0000473;5.57e-51;39!CL:0000234;5.57e-51;39!CL:0000576;5.09e-32;48!CL:0000766;6.65e-22;69!CL:0000763;3.14e-10;100!CL:0002087;1.48e-09;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.21e-63,42;CL:0002057,2.21e-63,42;CL:0000473,3.19e-61,48;CL:0000234,3.19e-61,48;CL:0002194,2.67e-48,59;CL:0000576,2.67e-48,59;CL:0000040,2.67e-48,59;CL:0000559,2.67e-48,59;CL:0002009,1.24e-46,61;CL:0000839,6.78e-43,66;CL:0000557,3.25e-42,67;CL:0000766,4.37e-39,72;CL:0000763,5.09e-25,108;CL:0000049,5.09e-25,108;CL:0002087,2.70e-23,115;CL:0002031,3.47e-22,120;CL:0000738,3.54e-19,136;CL:0002032,1.16e-15,161;CL:0000837,1.16e-15,161;CL:0000037,7.33e-15,168;CL:0000988,6.31e-14,177 | |||
|ontology_enrichment_development_v019=CL:0002057;4.23e-42;42!CL:0000049;1.21e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.88e-27!80;UBERON:0001474!1.24e-24!86;UBERON:0002390!1.95e-23!102;UBERON:0003061!1.95e-23!102;UBERON:0004765!1.10e-22!101;UBERON:0001434!1.10e-22!101;UBERON:0002193!2.84e-22!112;UBERON:0001049!2.44e-21!57;UBERON:0005068!2.44e-21!57;UBERON:0006241!2.44e-21!57;UBERON:0007135!2.44e-21!57;UBERON:0002405!5.51e-19!115;UBERON:0002616!5.96e-16!59;UBERON:0007023!1.16e-14!115;UBERON:0001893!1.48e-14!34;UBERON:0002020!1.71e-14!34;UBERON:0003528!1.71e-14!34;UBERON:0002780!5.17e-14!41;UBERON:0001890!5.17e-14!41;UBERON:0006240!5.17e-14!41;UBERON:0003080!1.54e-13!42;UBERON:0002791!1.83e-13!33;UBERON:0000955!2.27e-13!69;UBERON:0006238!2.27e-13!69;UBERON:0002346!5.32e-13!90;UBERON:0003075!6.25e-13!86;UBERON:0007284!6.25e-13!86;UBERON:0001017!6.58e-13!82;UBERON:0005743!8.50e-13!86;UBERON:0000073!2.05e-12!94;UBERON:0001016!2.05e-12!94;UBERON:0001869!3.21e-12!32;UBERON:0002619!6.22e-10!22;UBERON:0000956!9.98e-10!25;UBERON:0000203!9.98e-10!25;UBERON:0003076!1.81e-09!15;UBERON:0003057!1.81e-09!15;UBERON:0002204!1.90e-09!167;UBERON:0001950!2.01e-09!20;UBERON:0003056!2.23e-08!61;UBERON:0000062!3.10e-08!511;UBERON:0002298!1.91e-07!8;UBERON:0003081!4.82e-07!216;UBERON:0000033!7.02e-07!123 | |||
|ontology_enrichment_uberon_v019=UBERON:0002038;7.26e-09;1!UBERON:0009661;7.26e-09;1!UBERON:0002950;7.26e-09;1!UBERON:0001891;7.26e-09;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,7.09e-37,76;UBERON:0001474,5.86e-34,82;UBERON:0004765,1.15e-30,90;UBERON:0002405,1.42e-29,93;UBERON:0002390,6.64e-28,98;UBERON:0003061,6.64e-28,98;UBERON:0001434,2.79e-27,100;UBERON:0002193,5.09e-25,108;UBERON:0002204,5.69e-15,167;UBERON:0003081,1.10e-11,203;UBERON:0002038,1.07e-08,1;UBERON:0009661,1.07e-08,1;UBERON:0002950,1.07e-08,1;UBERON:0001891,1.07e-08,1;UBERON:0009616,1.07e-08,1;UBERON:0010286,1.07e-08,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0.0764134057479513,0,0,0,0,0,0,0,0,0,0,0,0.553995408531877,1.20326668482085,0.651032612147555,0.223915474239924,0,0.257575567634187,0,0,0.242584061187816,0.929716147622738,1.23350366406548,0.309706370895104,6.90461741573161,2.56160706529101,2.12834006899727,9.65287906062532,1.93645405075148,9.47985406160392,0.376484679085209,0.272906150057846,0,7.65209730927256,1.28371610830437,6.39337125799041,0.329851300186716,1.99463657621632,2.13112375266347,2.03146467040009,0,2.4912889959823,3.51748131359441,3.12889751052121,0.65156653411535,0.605399502633369,1.84138817993782,1.26584954976354,0,0.212604299965044,0,0.22465726229299,0.150176892841506,0,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0.949265659568129,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.570471821544449,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0.103052529238439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0.234004265139238,0.297262324577456,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0.253991577168676,0,1.17217447210047,0,0.102827492703324,0.600686115687835,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.10833939483032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647142602455851,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.635020748171649,0,0,0,0,0,0,0,0,0.425846237690326,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0.984685914873589,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0.331737779793674,0.295547618953547,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0.166211681900156,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104421949505455,0.876214728748802,0,0.234264445725339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0967563312890851,0,0,0,0,0,0,0,0.0633107959558787,0,0,0.213452994739353,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0,1.09524303113594,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0.408610218334727,0,0,0,0,0,0.425246896606173,0,0,0.0524545881349981,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0.387848869084652,0.52893040697076,0,0,0.106787412567695,0,0,0,0.197611631897944,0,0.638341257770182,0,0,0,0,0,0,0,0.751145584238999,0,0.221858103073705,0.372578417648301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192914038270915,0,0,0,0,1.24432592536558,0,0,0,0.327609848846413,0,0,0,0,0.172214979660816,0,0,0,0,0,0.215649622793364,0,0.109209638192014,0,0,0.991486114072017,0,0,0,0,0,0,0.321146125482298,1.41696576325585,0.319267718114302,0,0,0.207471757392654,0.484426936895553,0,0,0,0,0,0,0,0,0,0.20170506870352,0,0,0,0,0.405225507710368,0,0.826747186004736,0.380494861163441,0,0,0,0,0,0,0,0,0,0,0,0,0.611727596791485,0.328863867814245,0,0,0,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0.17071847709395,0,0,0,0,0,0,0,0,0,0.098150233615243,0,0.647428837187895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0.297046400327086,1.2679671827502,0,0,0,0,0,0,0,0,0,1.14671666521161,0,0.679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0.930896962757057,0,0,0,0.0620747142958579,0,0,0,0,0,0.134704106029175,0,0,0,0,0,0,0,0.366724332548599,0,0,0,0 | |||
|short_description=p@chr12:121584118..121584122,+ | |||
}} |
Revision as of 16:19, 11 January 2014
Short description: | p@chr12:121584118..121584122, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:121584118..121584122, + |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.21e-63 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.21e-63 | 42 |
defensive cell | 3.19e-61 | 48 |
phagocyte | 3.19e-61 | 48 |
monopoietic cell | 2.67e-48 | 59 |
monocyte | 2.67e-48 | 59 |
monoblast | 2.67e-48 | 59 |
promonocyte | 2.67e-48 | 59 |
macrophage dendritic cell progenitor | 1.24e-46 | 61 |
myeloid lineage restricted progenitor cell | 6.78e-43 | 66 |
granulocyte monocyte progenitor cell | 3.25e-42 | 67 |
myeloid leukocyte | 4.37e-39 | 72 |
myeloid cell | 5.09e-25 | 108 |
common myeloid progenitor | 5.09e-25 | 108 |
nongranular leukocyte | 2.70e-23 | 115 |
hematopoietic lineage restricted progenitor cell | 3.47e-22 | 120 |
leukocyte | 3.54e-19 | 136 |
hematopoietic oligopotent progenitor cell | 1.16e-15 | 161 |
hematopoietic multipotent progenitor cell | 1.16e-15 | 161 |
hematopoietic stem cell | 7.33e-15 | 168 |
hematopoietic cell | 6.31e-14 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 7.09e-37 | 76 |
bone element | 5.86e-34 | 82 |
skeletal element | 1.15e-30 | 90 |
immune system | 1.42e-29 | 93 |
hematopoietic system | 6.64e-28 | 98 |
blood island | 6.64e-28 | 98 |
skeletal system | 2.79e-27 | 100 |
hemolymphoid system | 5.09e-25 | 108 |
musculoskeletal system | 5.69e-15 | 167 |
lateral plate mesoderm | 1.10e-11 | 203 |
substantia nigra | 1.07e-08 | 1 |
midbrain nucleus | 1.07e-08 | 1 |
regional part of midbrain | 1.07e-08 | 1 |
midbrain | 1.07e-08 | 1 |
presumptive midbrain | 1.07e-08 | 1 |
midbrain neural tube | 1.07e-08 | 1 |