FFCP PHASE1:Hg19::chr12:29542557..29542577,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr12:29542557..29542577,+
|short_description=p1@ENST00000550906
|description=CAGE_peak_1_at_ENST00000550906_5end
|association_with_transcript=-93bp_to_ENST0000...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-93bp_to_ENST00000550906_5end | |||
|cluster_id=chr12:29542557..29542577,+ | |||
|description=CAGE_peak_1_at_ENST00000550906_5end | |||
|id=chr12:29542557..29542577,+ | |||
|ontology_enrichment_celltype=CL:0000738!5.53e-16!140;CL:0002087!6.62e-15!119;CL:0002031!1.29e-14!124;CL:0000037!3.11e-12!172;CL:0000566!3.11e-12!172;CL:0000988!1.21e-11!182;CL:0000791!1.07e-10!18;CL:0000789!1.07e-10!18;CL:0002420!1.07e-10!18;CL:0002419!1.07e-10!18;CL:0000790!1.07e-10!18;CL:0002032!1.46e-10!165;CL:0000837!1.46e-10!165;CL:0000084!8.21e-08!25;CL:0000827!8.21e-08!25;CL:0000624!1.00e-07!6;CL:0000839!1.19e-07!70;CL:0000838!1.20e-07!52;CL:0000451!1.50e-07!10;CL:0000990!1.70e-07!8;CL:0000542!2.27e-07!53;CL:0000051!2.27e-07!53;CL:0002009!3.31e-07!65;CL:0002194!4.66e-07!63;CL:0000576!4.66e-07!63;CL:0000040!4.66e-07!63;CL:0000559!4.66e-07!63 | |||
|ontology_enrichment_celltype_v019=CL:0000815;2.18e-09;2!CL:0000792;2.18e-09;2!CL:0002677;2.18e-09;2!CL:0000542;1.00e-08;53!CL:0000791;5.82e-08;18!CL:0000789;5.82e-08;18!CL:0002419;5.82e-08;18!CL:0000084;2.00e-07;25!CL:0000624;5.09e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,4.29e-13,52;CL:0000542,8.66e-13,53;CL:0000051,8.66e-13,53;CL:0000738,2.22e-12,136;CL:0002031,5.32e-12,120;CL:0002087,2.10e-11,115;CL:0000037,3.95e-11,168;CL:0002032,8.90e-11,161;CL:0000837,8.90e-11,161;CL:0000988,2.86e-10,177;CL:0000815,8.44e-10,2;CL:0000792,8.44e-10,2;CL:0002677,8.44e-10,2;CL:0000791,3.18e-08,18;CL:0000789,3.18e-08,18;CL:0002420,3.18e-08,18;CL:0002419,3.18e-08,18;CL:0000790,3.18e-08,18;CL:0000084,1.14e-07,25;CL:0000827,1.14e-07,25;CL:0000236,2.49e-07,14;CL:0000624,2.95e-07,6;CL:0000898,8.51e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000051;1.00e-08;53!CL:0000790;5.82e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!2.92e-10!112;UBERON:0002390!7.83e-08!102;UBERON:0003061!7.83e-08!102;UBERON:0002405!2.26e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;5.15e-09;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,3.22e-09,8 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.32401601740905,0,0.293600439334847,0.553995408531877,0,2.17010870715852,2.23915474239924,0.647787332037959,0,0.145398238779565,0,0.485168122375632,0,0.411167888021826,0.309706370895104,0,0,0.47296445977717,0,0,0,0.376484679085209,0.272906150057846,0,0.306083892370903,0,0,0,0,0,0,0.56738522469114,0.622822248995575,0.251248665256743,0,0,0,0,0,0.845021145247767,0,0.209658645508376,1.12328631146495,0.450530678524519,0.64290234678832,1.42506371870624,0,0.730656615058536,0,1.09227722252426,0,0.853460445133014,1.60158394814405,0,0,0,1.1384259382189,0,1.52909291250092,1.32171328579026,0.560508562981536,0,2.75393678159366,0.393010762749165,0.616804496998528,0.83593247695339,1.62961133316795,0.946895611469467,9.74133642039557,1.00269411196656,1.76763544484902,0.886135578334485,0.812411591295047,0.896639238079726,0.520237390239513,0.986627427622057,0,1.15921234294021,1.63115219478266,1.07016331235885,1.04535523804977,2.15287751125376,0.766440987203842,3.4362744548263,1.26509846009751,0,0.651083453856419,0,1.20460095262218,0.639933055772092,0,0.236777252044017,0.821127996921047,1.81446068902259,0.267440195783507,1.73789284659359,0,0.670700859703636,0.255725123687061,0,0,0,0,0,0,0,0,0.785874452986276,0,0,0.649094787309367,0.522389211897802,2.12732736830184,0.476981248610684,1.14398982156026,0,0.79504962946682,0,0,0.56530794192401,0,0,0.208994966536811,0.775250277507987,0,0,0,0,0,0,0,0.446498641420399,1.57170560838319,0.112611480483322,3.06633274931766,0,0.366403487860815,1.31780417436063,0,0,0,0.12663051166458,0,0,0,0,0,0,0.622422070799533,0.269421344139376,0.653847612453835,0,0,0,0,0,0,0,0.161872944368132,0,0,0,0,0,0,0.910161361938026,0,0,0,0,0,0,0,0.567160915800105,0,0,0,0,0,0,0,0,0,0,0.0920498986422993,0,0,0.403008392910561,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329250856225877,0,0,0,0,0,0,0,0,0.144366447761074,0.462985512576611,0.380508304469197,0,0,2.21595305478658,0.234004265139238,0,0,0,0,0,0,0,0,0,0,0.288239906833923,0,0,0,0,0,0,0,0,0.112131084345361,0.43596006883328,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0.355391948742546,0,0,0,0,1.2162378064119,0,0,0,0,0,0,0,0,0,1.18218456121156,0,0.513372145118994,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.686286847621712,0.206768026122887,0.862856803274467,0.106727557803444,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0.177561725313127,0,1.03850885836724,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0.877039506583738,1.5686127061494,0,0,0,0.103041011647722,0,0,0,0,1.6068392984416,0.096670718292122,0,0,0.137836572484531,0,0,0,0.267096106940212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.63384301862879,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0.281695602532241,0.286822704408103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569647187174163,0.952927101831156,0.822724546172388,0,0,0,0,0,7.10616626344992,0,0,0,0,0,0,0,0,0,0,0,0,9.48033955688978,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0.95497793895076,0,0,0,0,0,0,0,0.398495976502139,0.276283915531148,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0.307801034015188,0,0,0,0,0.638002319463839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.484945082442097,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0.410716136675979,0,0,1.57732412567589,0,0,0,0,0.429226048136571,0,0.335917362433631,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0.2249738915515,0,0,0,0.0788057072991982,0.209818352539992,0,0,0,1.42939065274673,0,0,0,0,0,0,0,0,0,0,1.32506888912221,0,0.26446520348538,0,0,0.106787412567695,0,0,0.496166021811951,0,0,0,0,0.2506898940227,0,0.983617892129413,0,0,0.122026264901963,0.500763722825999,0,0.110929051536852,0.124192805882767,0,0,0,0,0,0,0,0,0.467426619694449,0,0,0,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0,0,0,0.181848659202559,0,0.464033759878494,0,0,0,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.14346339723327,0.797189041880179,0.327130788511688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.478901577171454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0.206686796501184,0,0,0,0,0,0,0,0.336283722218824,0,0,0,1.95897778844825,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0.846774100381858,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0.490296643507811,0,0,0.297046400327086,0,0,0.187967835959707,0.257831551894309,0,0,0,0,0,0,0.286679166302903,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75495277504663,2.27336094654718,4.82335434281121,0,0.103432995861895,0.213233981900981,0.23806443146374,0.387533459016037,0.993195428733726,0,0.25458863311266,0,0,0,0.5388164241167,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.32401601740905,0,0.293600439334847,0.553995408531877,0,2.17010870715852,2.23915474239924,0.647787332037959,0,0.145398238779565,0,0.485168122375632,0,0.411167888021826,0.309706370895104,0,0,0.47296445977717,0,0,0,0.376484679085209,0.272906150057846,0,0.306083892370903,0,0,0,0,0,0,0.56738522469114,0.622822248995575,0.251248665256743,0,0,0,0,0,0.845021145247767,0,0.209658645508376,1.12328631146495,0.450530678524519,0.64290234678832,1.42506371870624,0,0.730656615058536,0,1.09227722252426,0,0.853460445133014,1.60158394814405,0,0,0,1.1384259382189,0,1.52909291250092,1.32171328579026,0.560508562981536,0,2.75393678159366,0.393010762749165,0.616804496998528,0.83593247695339,1.62961133316795,0.946895611469467,9.74133642039557,1.00269411196656,1.76763544484902,0.886135578334485,0.812411591295047,0.896639238079726,0.520237390239513,0.986627427622057,0,1.15921234294021,1.63115219478266,1.07016331235885,1.04535523804977,2.15287751125376,0.766440987203842,3.4362744548263,1.26509846009751,0,0.651083453856419,0,1.20460095262218,0.639933055772092,0,0.236777252044017,0.821127996921047,1.81446068902259,0.267440195783507,1.73789284659359,0,0.670700859703636,0.255725123687061,0,0,0,0,0,0,0,0,0.785874452986276,0,0,0.649094787309367,0.522389211897802,2.12732736830184,0.476981248610684,1.14398982156026,0,0.79504962946682,0,0,0.56530794192401,0,0,0.208994966536811,0.775250277507987,0,0,0,0,0,0,0,0.446498641420399,1.57170560838319,0.112611480483322,3.06633274931766,0,0.366403487860815,1.31780417436063,0,0,0,0.12663051166458,0,0,0,0,0,0,0.622422070799533,0.269421344139376,0.653847612453835,0,0,0,0,0,0,0,0.161872944368132,0,0,0,0,0,0,0.910161361938026,0,0,0,0,0,0,0,0.567160915800105,0,0,0,0,0,0,0,0,0,0,0.0920498986422993,0,0,0.403008392910561,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329250856225877,0,0,0,0,0,0,0,0,0.144366447761074,0.462985512576611,0.380508304469197,0,0,2.21595305478658,0.234004265139238,0,0,0,0,0,0,0,0,0,0,0.288239906833923,0,0,0,0,0,0,0,0,0.112131084345361,0.43596006883328,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0.355391948742546,0,0,0,0,1.2162378064119,0,0,0,0,0,0,0,0,0,1.18218456121156,0,0.513372145118994,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.686286847621712,0.206768026122887,0.862856803274467,0.106727557803444,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0.177561725313127,0,1.03850885836724,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0.877039506583738,1.5686127061494,0,0,0,0.103041011647722,0,0,0,0,1.6068392984416,0.096670718292122,0,0,0.137836572484531,0,0,0,0.267096106940212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.63384301862879,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0.281695602532241,0.286822704408103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569647187174163,0.952927101831156,0.822724546172388,0,0,0,0,0,7.10616626344992,0,0,0,0,0,0,0,0,0,0,0,0,9.48033955688978,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0.95497793895076,0,0,0,0,0,0,0,0.398495976502139,0.276283915531148,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0.307801034015188,0,0,0,0,0.638002319463839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.484945082442097,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0.410716136675979,0,0,1.57732412567589,0,0,0,0,0.429226048136571,0,0.335917362433631,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0.2249738915515,0,0,0,0.0788057072991982,0.209818352539992,0,0,0,1.42939065274673,0,0,0,0,0,0,0,0,0,0,1.32506888912221,0,0.26446520348538,0,0,0.106787412567695,0,0,0.496166021811951,0,0,0,0,0.2506898940227,0,0.983617892129413,0,0,0.122026264901963,0.500763722825999,0,0.110929051536852,0.124192805882767,0,0,0,0,0,0,0,0,0.467426619694449,0,0,0,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0,0,0,0.181848659202559,0,0.464033759878494,0,0,0,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.14346339723327,0.797189041880179,0.327130788511688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.478901577171454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0.206686796501184,0,0,0,0,0,0,0,0.336283722218824,0,0,0,1.95897778844825,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0.846774100381858,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0.490296643507811,0,0,0.297046400327086,0,0,0.187967835959707,0.257831551894309,0,0,0,0,0,0,0.286679166302903,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75495277504663,2.27336094654718,4.82335434281121,0,0.103432995861895,0.213233981900981,0.23806443146374,0.387533459016037,0.993195428733726,0,0.25458863311266,0,0,0,0.5388164241167,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p1@ENST00000550906 | |||
}} | }} |
Latest revision as of 08:01, 24 July 2015
Short description: | p1@ENST00000550906 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000550906_5end |
Coexpression cluster: | NA |
Association with transcript: | -93bp_to_ENST00000550906_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 4.29e-13 | 52 |
lymphocyte | 8.66e-13 | 53 |
common lymphoid progenitor | 8.66e-13 | 53 |
leukocyte | 2.22e-12 | 136 |
hematopoietic lineage restricted progenitor cell | 5.32e-12 | 120 |
nongranular leukocyte | 2.10e-11 | 115 |
hematopoietic stem cell | 3.95e-11 | 168 |
hematopoietic oligopotent progenitor cell | 8.90e-11 | 161 |
hematopoietic multipotent progenitor cell | 8.90e-11 | 161 |
hematopoietic cell | 2.86e-10 | 177 |
regulatory T cell | 8.44e-10 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 8.44e-10 | 2 |
naive regulatory T cell | 8.44e-10 | 2 |
mature alpha-beta T cell | 3.18e-08 | 18 |
alpha-beta T cell | 3.18e-08 | 18 |
immature T cell | 3.18e-08 | 18 |
mature T cell | 3.18e-08 | 18 |
immature alpha-beta T cell | 3.18e-08 | 18 |
T cell | 1.14e-07 | 25 |
pro-T cell | 1.14e-07 | 25 |
B cell | 2.49e-07 | 14 |
CD4-positive, alpha-beta T cell | 2.95e-07 | 6 |
naive T cell | 8.51e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
testis | 3.22e-09 | 8 |