FFCP PHASE1:Hg19::chr15:91565751..91565764,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr15:91565751..91565764,-
|short_description=p2@VPS33B
|description=CAGE_peak_2_at_VPS33B_5end
|association_with_transcript=-8bp_to_ENST00000535843_5end
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=26276 | |EntrezGene=26276 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12712 | |HGNC=12712 | ||
|TSSclassifier=strong | |||
|UniProt=B3KQF6 | |UniProt=B3KQF6 | ||
|association_with_transcript=-8bp_to_ENST00000535843_5end | |||
|cluster_id=chr15:91565751..91565764,- | |||
|description=CAGE_peak_2_at_VPS33B_5end | |||
|id=chr15:91565751..91565764,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002536;5.93e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002536,9.17e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;2.08e-07;34!UBERON:0001869;3.37e-07;32!UBERON:0002619;5.02e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001869,8.54e-09,32;UBERON:0001893,3.66e-08,34;UBERON:0000073,1.07e-07,53;UBERON:0002616,1.07e-07,53;UBERON:0002346,1.25e-07,86;UBERON:0010371,2.81e-07,104;UBERON:0003075,3.04e-07,82;UBERON:0007284,3.04e-07,82;UBERON:0002791,3.14e-07,32;UBERON:0001049,3.93e-07,56;UBERON:0005068,3.93e-07,56;UBERON:0006241,3.93e-07,56;UBERON:0007135,3.93e-07,56;UBERON:0002619,5.85e-07,22 | |||
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| ||
|short_description=p2@VPS33B | |||
}} | }} |
Latest revision as of 21:22, 19 September 2015
Short description: | p2@VPS33B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_VPS33B_5end |
Coexpression cluster: | NA |
Association with transcript: | -8bp_to_ENST00000535843_5end |
EntrezGene: | VPS33B |
HGNC: | 12712 |
UniProt: | B3KQF6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
amniotic epithelial cell | 9.17e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
cerebral hemisphere | 8.54e-09 | 32 |
telencephalon | 3.66e-08 | 34 |
regional part of nervous system | 1.07e-07 | 53 |
regional part of brain | 1.07e-07 | 53 |
neurectoderm | 1.25e-07 | 86 |
ecto-epithelium | 2.81e-07 | 104 |
neural plate | 3.04e-07 | 82 |
presumptive neural plate | 3.04e-07 | 82 |
regional part of telencephalon | 3.14e-07 | 32 |
neural tube | 3.93e-07 | 56 |
neural rod | 3.93e-07 | 56 |
future spinal cord | 3.93e-07 | 56 |
neural keel | 3.93e-07 | 56 |
regional part of cerebral cortex | 5.85e-07 | 22 |