FFCP PHASE1:Hg19::chr17:56032602..56032610,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr17:56032602..56032610,- to FFCP PHASE1:Hg19::chr17:56032602..56032610,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=404093 | |EntrezGene=404093 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=31350 | |HGNC=31350 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NWM3 | |UniProt=Q9NWM3 | ||
|association_with_transcript=73bp_to_ENST00000407144,uc002ive.1_5end | |||
|cluster_id=chr17:56032602..56032610,- | |||
|description=CAGE_peak_6_at_CUEDC1_5end | |||
|id=chr17:56032602..56032610,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000346;1.40e-13;3!CL:1000428;1.40e-13;3!CL:0002591;8.20e-11;1!CL:0002616;8.20e-11;1!CL:0002559;1.66e-08;5!CL:0000136;3.39e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000346,1.09e-13,3;CL:1000428,1.09e-13,3;CL:0002616,4.15e-11,1;CL:0002591,1.21e-10,1;CL:0002559,1.43e-08,5 | |||
|ontology_enrichment_development_v019=UBERON:0005425;2.93e-11;1!UBERON:0010227;8.20e-11;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!4.61e-11!365;UBERON:0007023!5.54e-11!115;UBERON:0000468!5.61e-10!659;UBERON:0001049!3.51e-09!57;UBERON:0005068!3.51e-09!57;UBERON:0006241!3.51e-09!57;UBERON:0007135!3.51e-09!57;UBERON:0000477!3.63e-09!286;UBERON:0000153!7.23e-09!129;UBERON:0007811!7.23e-09!129;UBERON:0000955!1.66e-08!69;UBERON:0006238!1.66e-08!69;UBERON:0000033!1.73e-08!123;UBERON:0002616!2.30e-08!59;UBERON:0004111!3.07e-08!241;UBERON:0001017!4.11e-08!82;UBERON:0000062!5.36e-08!511;UBERON:0003075!5.79e-08!86;UBERON:0007284!5.79e-08!86;UBERON:0000119!7.55e-08!312;UBERON:0005743!1.08e-07!86;UBERON:0000467!1.16e-07!625;UBERON:0000483!1.19e-07!309;UBERON:0000073!1.20e-07!94;UBERON:0001016!1.20e-07!94;UBERON:0002346!1.41e-07!90;UBERON:0002780!1.48e-07!41;UBERON:0001890!1.48e-07!41;UBERON:0006240!1.48e-07!41;UBERON:0000480!1.54e-07!626;UBERON:0000481!2.01e-07!347;UBERON:0001893!2.50e-07!34;UBERON:0003080!3.85e-07!42;UBERON:0000025!5.72e-07!194;UBERON:0002791!6.23e-07!33;UBERON:0002020!8.05e-07!34;UBERON:0003528!8.05e-07!34 | |||
|ontology_enrichment_uberon_v019=UBERON:0005162;9.33e-21;2!UBERON:0000122;9.33e-21;2!UBERON:0000412;1.40e-13;3!UBERON:0001992;1.40e-13;3!UBERON:0002336;2.93e-11;1!UBERON:0000941;2.93e-11;1!UBERON:0001785;2.93e-11;1!UBERON:0002464;2.93e-11;1!UBERON:0004904;2.93e-11;1!UBERON:0011215;2.93e-11;1!UBERON:0001018;2.93e-11;1!UBERON:0001021;2.93e-11;1!UBERON:0002473;2.93e-11;1!UBERON:0005340;2.93e-11;1!UBERON:0003544;2.93e-11;1!UBERON:0005970;2.93e-11;1!UBERON:0002316;2.93e-11;1!UBERON:0001020;2.93e-11;1!UBERON:0002437;2.93e-11;1!UBERON:0002079;8.20e-11;1!UBERON:0002073;1.66e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005162,7.70e-21,2;UBERON:0000122,7.70e-21,2;UBERON:0000412,1.09e-13,3;UBERON:0001992,1.09e-13,3;UBERON:0000941,2.53e-11,1;UBERON:0001785,2.53e-11,1;UBERON:0002464,2.53e-11,1;UBERON:0004904,2.53e-11,1;UBERON:0001021,2.53e-11,1;UBERON:0003902,2.53e-11,1;UBERON:0005425,2.53e-11,1;UBERON:0002336,2.79e-11,1;UBERON:0011215,2.79e-11,1;UBERON:0001018,2.79e-11,1;UBERON:0002473,2.79e-11,1;UBERON:0005340,2.79e-11,1;UBERON:0003544,2.79e-11,1;UBERON:0005970,2.79e-11,1;UBERON:0002316,2.79e-11,1;UBERON:0001020,2.79e-11,1;UBERON:0002437,2.79e-11,1;UBERON:0002079,6.14e-11,1;UBERON:0002073,1.43e-08,5;UBERON:0005086,1.43e-08,5 | |||
|phase1_expression=0,0.428201047781966,0,1.0007329835313,0,1.74467704820074,2.53299878168311,0,0,0.737201809504527,1.39560233594486,0.218441372130172,0,0.247532705920093,0,0,0,0,0,0.123121058076788,0.408001382488506,0,0.85870796139317,0.410623275218653,0,0,0,0,0,0,0,0,0.30120591877825,0.739508020333575,0,0,0,0,0,0,0.223915474239924,0,0,0.290796477559129,0.377875943688809,0,0.232429036905685,0,0,0,0,0,0.344745680736619,0,0,0,0.272906150057846,0,0,0,0,0.329851300186716,0,0,0,0,0,0,0,0,0,0,0,0.422510572623884,0,0.209658645508376,0.22465726229299,0,0.16072558669708,0,0,0.547992461293902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0.383587685530591,0,0,0.289693037921647,0,0.486634870302636,0.378139268656271,0.443458794925128,0,0.327447688744282,0,0.370784442784429,0,0.696518949197069,0,0,0,0.371457501329565,0,0.860234595106124,0.694281003215189,0,0,0.275118041940067,0,0.258416759169329,0,0,0,0,0.488124115096339,0,0,0.0892997282840798,0,0,0,0,0.183201743930407,0,0,0,0.496971951695318,0.506522046658319,0.264818361626438,0.286836620748814,0,0.560677600142307,1.06748995729705,0.24666754841716,0.311211035399766,0.134710672069688,0.163461903113459,0,0.576175924479999,0.234321431833797,0,0,0,0,0.161872944368132,0.280901613404497,0.204154171254893,0.122834317311768,0.516628905878827,1.18800285728205,0.247266929278557,0,0.718618141816238,0,0,1.38532057742091,0,0.612975591598039,0.751190294532984,0.113432183160021,0.358779271377724,0.85422955527427,0.211931901159562,0.300091096084402,0.206105058476878,0.257640540045629,0.18611685633159,0.168776332241266,0.0974370051611986,0.252433774244115,0.184099797284599,0.646584227275248,0.355009592516614,0.10075209822764,0,0.386521706326594,0,0.286804595389004,0,0,0,0.207322110030741,0.252320850875628,0,1.56449532329816,0,1.38134921352481,0.928735856063958,0.721879481669586,0.118306800039844,0,0,0,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0.0925884451585296,0.325808305310325,0,0,0.115930404975077,0.117408694235822,0.288732895522148,0,0,1.58040879591855,0.858486162094873,0.246217006087397,0.234004265139238,0.148631162288728,0,0.16798212819886,0,0.0895585227028483,0,0,0,0.088048434013226,0,0.288239906833923,0,0.063497894292169,0,0,1.71072446022705,0,0,0.571652865261156,0.224262168690721,0.43596006883328,0,0,0,0,0,0,0,0,0.532844358032199,0.285955987316295,0.542621605391443,0,0,0,0.791951872933429,0.301439377059586,0,0.199945982364114,0,0.502257091432126,0,0.479249710983165,0,0,0.144781306667579,0.410952645100767,0,0,0,0,0,0,0,0,0.502548796003046,0,0,0,0,0.24538298343828,0,0.271265023699736,0.415941723061614,0.535286966391485,0.473107245101804,0.234282829985426,0.902838299183157,0,0,0,0.184369168541703,0,0.195801157462741,0.343143423810856,0,0,0.106727557803444,0.303127571446259,0,0.30239029332968,0,0.306923946576125,0.280660094433074,0.384417447767103,0.511707249066704,0.321707842287215,0,0,0.177561725313127,0,0,0.348631135379878,0.483437798366489,0.601519410909855,0,0,0.364182336013434,0.262248829918848,0,0.0770153371044148,0,0,0.316654886678627,0,0,0,0,0,0,0.254876273045038,0.831076008928724,0,0,0,0,0,0,0.103041011647722,0.183138929636687,0.247528499761764,0,0,0,0,0,0,0.275673144969061,0.214840489736547,0,0.0852266274161009,0.178064071293475,0,0.192190067365106,0.127612712494584,0.10115778085555,0,0.31481234683064,0,0.308033580176089,0,0,0.37064843820784,0,0.372158369359667,0,0.571890581771475,0.255897791311334,0.42793898803392,0,0,0.179872457583315,0.54907405947211,0.117812402345686,0.404364963146632,0,0,0,0.243713489631284,1.05650146756755,0.136499911407986,0.282810863907425,1.13008116620243,0.551365343546124,0,0,0,0,0.202910376962704,0.92947049429925,0,0,0.196498082026242,0,0,0.633322905892992,0.329294892959902,0,0.699869440489966,0,0,0,0.0941438007767792,0,0,0,0,0,0.764637207142375,0,0,0,0,0,0,0.320472213382419,0.962479855263359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0.568272293612826,0,1.18785872333055,0,0,0.140669416410513,0.111308705022906,0,0.844501632511974,0.796991953004279,0,0.251932747854276,0,0,0,0.539210106883961,0,0,0.295930216910801,0,0,0,0.278304294485554,1.99613798001194,0,0,0,0.227586896570999,0.254253650292766,0,0.344743373241465,0,0,0,0.482385754501632,0,0,0.295547618953547,0.219385397153973,0,0,0.769502585037971,0.341826167541004,0,0,0,0,0.183195186803725,0.533034776018635,0,0,0,0,0.19606253431774,0.167821586975843,0,0,0,0,0.141353071433941,0,0,0.0884575645033392,0,0,0,0,2.83084758518844,0,0.468528891450678,0,0,0,0,0,0,0.252746318513952,0,0,0,0,0.313932918407225,0,0,0.277349346026277,0,0,0.0870592065804026,0.17472666824203,0,0,0.0730893170861856,0,0.484945082442097,0.0882561266915003,0.677942222341597,0.137041924646751,0,0.696418755514666,0,0.240476460754601,0.640358984218058,0.19980960958213,0,0,0.343189995723929,0,0.248505071130865,0,0,0,0.203996435272644,0,0.600420288709789,0.410716136675979,0,0.429765441419957,0,0.55856480254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| ||
|short_description=p6@CUEDC1 | |||
}} | }} |
Latest revision as of 09:34, 16 September 2015
Short description: | p6@CUEDC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_CUEDC1_5end |
Coexpression cluster: | NA |
Association with transcript: | 73bp_to_ENST00000407144, uc002ive.1_5end |
EntrezGene: | CUEDC1 |
HGNC: | 31350 |
UniProt: | Q9NWM3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hair follicle dermal papilla cell | 1.09e-13 | 3 |
stem cell of epidermis | 1.09e-13 | 3 |
perirenal adipocyte cell | 4.15e-11 | 1 |
smooth muscle cell of the pulmonary artery | 1.21e-10 | 1 |
hair follicle cell | 1.43e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
multi cell component structure | 7.70e-21 | 2 |
neuron projection bundle | 7.70e-21 | 2 |
dermal papilla | 1.09e-13 | 3 |
papillary layer of dermis | 1.09e-13 | 3 |
cranial nerve II | 2.53e-11 | 1 |
cranial nerve | 2.53e-11 | 1 |
nerve trunk | 2.53e-11 | 1 |
nerve connecting eye with brain | 2.53e-11 | 1 |
nerve | 2.53e-11 | 1 |
retinal neural layer | 2.53e-11 | 1 |
presumptive neural retina | 2.53e-11 | 1 |
corpus callosum | 2.79e-11 | 1 |
central nervous system cell part cluster | 2.79e-11 | 1 |
axon tract | 2.79e-11 | 1 |
intercerebral commissure | 2.79e-11 | 1 |
dorsal telencephalic commissure | 2.79e-11 | 1 |
brain white matter | 2.79e-11 | 1 |
brain commissure | 2.79e-11 | 1 |
white matter | 2.79e-11 | 1 |
nervous system commissure | 2.79e-11 | 1 |
cerebral hemisphere white matter | 2.79e-11 | 1 |
left cardiac atrium | 6.14e-11 | 1 |
hair follicle | 1.43e-08 | 5 |
hair follicle placode | 1.43e-08 | 5 |