FFCP PHASE1:Hg19::chr1:183201372..183201407,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:183201372..183201407,+ to FFCP PHASE1:Hg19::chr1:183201372..183201407,+: NSchange) |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr1:183201372..183201407,+ | |||
|coexpression_cluster_id=C268 | |||
|description=CAGE_peak_at_chr1:183201372..183201407,+ | |||
|id=chr1:183201372..183201407,+ | |||
|ontology_enrichment_celltype=CL:0000066!2.54e-32!254;CL:0002076!1.80e-25!43;CL:0002368!2.89e-20!13;CL:0000223!1.38e-17!59;CL:0002159!3.71e-14!13;CL:0002202!4.25e-13!9;CL:0002632!4.25e-13!9;CL:0002251!4.74e-10!21;CL:0000244!3.12e-09!4;CL:0000731!3.12e-09!4;CL:0000220!1.32e-08!246;CL:0002321!1.98e-08!248;CL:0002166!2.90e-07!3;CL:0002077!3.78e-07!33;CL:0002621!4.13e-07!3;CL:0000076!4.23e-07!62;CL:0002328!5.21e-07!3;CL:0000063!7.25e-07!578;CL:0000068!8.59e-07!3;CL:0000069!8.59e-07!3;CL:0000307!8.59e-07!3;CL:0000377!8.59e-07!3;CL:0000622!9.75e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0002368;3.40e-38;13!CL:0002159;7.36e-29;14!CL:0002076;8.49e-26;42!CL:0000244;2.40e-22;4!CL:0000731;2.40e-22;4!CL:0002202;4.89e-20;9!CL:0002632;4.89e-20;9!CL:0002166;4.85e-17;3!CL:0002621;1.64e-16;3!CL:0002328;3.41e-16;3!CL:0000307;6.86e-16;3!CL:0000362;2.46e-14;9!CL:0000240;1.06e-13;6!CL:0000311;1.06e-13;6!CL:0000079;1.06e-13;6!CL:0000237;1.06e-13;6!CL:0002327;4.06e-12;4!CL:0002077;4.54e-12;34!CL:0000317;9.06e-12;2!CL:1000448;9.06e-12;2!CL:0002308;9.06e-12;2!CL:0002140;9.06e-12;2!CL:0002536;9.17e-11;2!CL:0000312;8.87e-10;5!CL:0002231;4.54e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002368,3.21e-38,13;CL:0002076,5.61e-32,42;CL:0002159,8.01e-29,14;CL:0000066,7.80e-23,253;CL:0000244,2.34e-22,4;CL:0000731,2.34e-22,4;CL:0000223,4.16e-22,58;CL:0002202,4.81e-20,9;CL:0002632,4.81e-20,9;CL:0002166,4.99e-17,3;CL:0002621,1.30e-16,3;CL:0002328,2.43e-16,3;CL:0000068,9.35e-16,3;CL:0000069,9.35e-16,3;CL:0000307,9.35e-16,3;CL:0000377,9.35e-16,3;CL:0000362,2.64e-14,9;CL:0000240,1.04e-13,6;CL:0000311,1.04e-13,6;CL:0000079,1.04e-13,6;CL:0000237,1.04e-13,6;CL:0000036,1.04e-13,6;CL:0000357,1.04e-13,6;CL:0000114,1.04e-13,6;CL:0002077,1.89e-13,34;CL:0002327,3.49e-12,4;CL:0000317,8.83e-12,2;CL:1000448,8.83e-12,2;CL:0002308,8.83e-12,2;CL:0002140,8.83e-12,2;CL:0002536,9.17e-11,2;CL:0002321,3.84e-10,250;CL:0000312,9.73e-10,5;CL:0002231,5.22e-08,3 | |||
|ontology_enrichment_development_v019=CL:0000377;6.86e-16;3!CL:0000357;1.06e-13;6!CL:0000114;1.06e-13;6!CL:0000223;2.12e-13;58 | |||
|ontology_enrichment_disease=DOID:1749!3.85e-12!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007196!6.02e-12!14;UBERON:0001558!6.02e-12!14;UBERON:0005910!2.05e-11!6;UBERON:0004119!3.01e-11!169;UBERON:0000925!3.01e-11!169;UBERON:0006595!3.01e-11!169;UBERON:0005631!5.50e-11!14;UBERON:0000158!5.50e-11!14;UBERON:0001004!2.69e-10!72;UBERON:0000365!3.26e-10!5;UBERON:0003124!9.54e-09!7;UBERON:0000065!1.16e-07!53;UBERON:0005178!2.79e-07!34;UBERON:0002224!2.79e-07!34;UBERON:0001949!4.13e-07!3;UBERON:0004815!5.21e-07!3;UBERON:0002031!5.21e-07!3;UBERON:0005181!5.61e-07!35 | |||
|ontology_enrichment_uberon_v019=UBERON:0000486;2.98e-21;12!UBERON:0000365;6.59e-18;5!UBERON:0001949;1.64e-16;3!UBERON:0004815;3.41e-16;3!UBERON:0002031;3.41e-16;3!UBERON:0005910;6.07e-15;6!UBERON:0001708;6.60e-13;4!UBERON:0008895;6.60e-13;4!UBERON:0001911;4.06e-12;4!UBERON:0007196;8.37e-12;15!UBERON:0001558;8.37e-12;15!UBERON:0002419;9.06e-12;2!UBERON:0007771;9.06e-12;2!UBERON:0003297;9.06e-12;2!UBERON:0001821;9.06e-12;2!UBERON:0003487;9.06e-12;2!UBERON:0001820;9.06e-12;2!UBERON:0011159;2.04e-10;5!UBERON:0005911;2.32e-10;36!UBERON:0002185;6.44e-10;5!UBERON:0010371;1.71e-09;31!UBERON:0001003;1.68e-08;15!UBERON:0007376;1.68e-08;15!UBERON:0004807;5.11e-08;22!UBERON:0000065;1.11e-07;44!UBERON:0003929;2.44e-07;7!UBERON:0000485;3.30e-07;7!UBERON:0003126;4.41e-07;7!UBERON:0001005;4.41e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000365,6.45e-18,5;UBERON:0001949,1.30e-16,3;UBERON:0004815,2.43e-16,3;UBERON:0002031,2.43e-16,3;UBERON:0005910,5.96e-15,6;UBERON:0001708,6.74e-13,4;UBERON:0008895,6.74e-13,4;UBERON:0001911,3.49e-12,4;UBERON:0005333,3.49e-12,4;UBERON:0008425,3.49e-12,4;UBERON:0005311,3.49e-12,4;UBERON:0007196,8.30e-12,15;UBERON:0001558,8.30e-12,15;UBERON:0002419,8.83e-12,2;UBERON:0007771,8.83e-12,2;UBERON:0003297,8.83e-12,2;UBERON:0001821,8.83e-12,2;UBERON:0003487,8.83e-12,2;UBERON:0001820,8.83e-12,2;UBERON:0005089,8.83e-12,2;UBERON:0005088,8.83e-12,2;UBERON:0004119,7.81e-11,160;UBERON:0000925,7.81e-11,160;UBERON:0006595,7.81e-11,160;UBERON:0011159,2.07e-10,5;UBERON:0002185,5.28e-10,5;UBERON:0001004,3.18e-09,74;UBERON:0010188,9.57e-09,6;UBERON:0002539,9.57e-09,6;UBERON:0008816,9.57e-09,6;UBERON:0003102,1.20e-08,99;UBERON:0001003,1.75e-08,15;UBERON:0007376,1.75e-08,15;UBERON:0007383,1.75e-08,15;UBERON:0000065,8.15e-08,54;UBERON:0005153,8.45e-08,37;UBERON:0005157,2.14e-07,47;UBERON:0003126,5.01e-07,7;UBERON:0001005,5.01e-07,7;UBERON:0005911,5.95e-07,82 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0.261185628199839,0.491467873003018,0,1.96597234917155,1.05506791291381,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.75826367343678,2.71085326900425,4.43704812200145,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45718115317017,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.18047026071267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.25173876959253,5.45492241181669,2.86804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,2.63400684980701,1.1240175325762,4.32274581370013,1.94435734832912,0,0,0,0,0,0.144366447761074,0.925971025153221,0.190254152234598,0,0,0,0,0,3.74935335947108,17.1341770762837,6.238104278665,2.7763142037883,2.3250715081117,2.68367875415648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,1.66435439510497,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,9.2232976339511,2.11786274552562,0,0,0,0.902399225814824,0.770153371044148,0.784349769176855,0,0.844413031143006,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0,0,0,4.01985876597321,5.85054221432869,0,0,0,0,0,0,0,0,0,6.7766815298001,8.26417289669956,1.78657797492418,5.0578890427775,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0.318203247925937,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,1.32687795048244,0,0,0,0,0.30982349809975,0,0,0,0,0,0.211107635297664,0,0,0,2.11688647996127,1.34060455107157,3.26672954583968,0,5.59656984472599,11.7930032967338,5.32116184244011,17.4589784157289,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0.296964680832639,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0.359473404589307,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897576444097721,0,0.638002319463839,0.183195186803725,0.533034776018635,0,0,0,0,0,0,0,0,2.3209787098083,0.163232808159148,0,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0,0,0,0,0,0,0,0,0.347119476670262,0.685946781900644,0.34823682632161,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0.240476460754601,0,0,0,0,0,0.576219191952599,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383830394638891,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0.470531639396343,0,0,0,0,0,0,0,0,0,0.151230923763239,0.15543720058278,0,0.159296767163702,0,0.155262956876259,0,0,0.521745061811734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.453411851024545,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0.279759015438889,1.24415452006595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0.733714394086716,0.231051332300676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0.255524855279191,0,0,0,0.227662191351298,0,0,0,0,0,0,0.222462803784138,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0.828864656652147,0,0.691259661814092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233939463462106,0,0,0,0,0,0.0771741581079447,0,0,0,0.235676547101626,0,0,0,0,0,0,0,0.178553938605658,0.352894871715692,0.0802413666891683,0,0,0,0,0,0,0,0.371995018166751,0,0,0,0,0,0,0,0,0.250707539292375,0,0,0,0,0,0,0.0645889098360061,0,0,0,0,0.217716747896961,0,0,0.286888821570705,0.332660356546013,0.0814032686109745,0.213454691755431,0,0,0,0,0,0,0,0 | |phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0.261185628199839,0.491467873003018,0,1.96597234917155,1.05506791291381,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.75826367343678,2.71085326900425,4.43704812200145,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45718115317017,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.18047026071267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.25173876959253,5.45492241181669,2.86804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,2.63400684980701,1.1240175325762,4.32274581370013,1.94435734832912,0,0,0,0,0,0.144366447761074,0.925971025153221,0.190254152234598,0,0,0,0,0,3.74935335947108,17.1341770762837,6.238104278665,2.7763142037883,2.3250715081117,2.68367875415648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,1.66435439510497,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,9.2232976339511,2.11786274552562,0,0,0,0.902399225814824,0.770153371044148,0.784349769176855,0,0.844413031143006,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0,0,0,4.01985876597321,5.85054221432869,0,0,0,0,0,0,0,0,0,6.7766815298001,8.26417289669956,1.78657797492418,5.0578890427775,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0.318203247925937,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,1.32687795048244,0,0,0,0,0.30982349809975,0,0,0,0,0,0.211107635297664,0,0,0,2.11688647996127,1.34060455107157,3.26672954583968,0,5.59656984472599,11.7930032967338,5.32116184244011,17.4589784157289,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0.296964680832639,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0.359473404589307,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897576444097721,0,0.638002319463839,0.183195186803725,0.533034776018635,0,0,0,0,0,0,0,0,2.3209787098083,0.163232808159148,0,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0,0,0,0,0,0,0,0,0.347119476670262,0.685946781900644,0.34823682632161,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0.240476460754601,0,0,0,0,0,0.576219191952599,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383830394638891,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0.470531639396343,0,0,0,0,0,0,0,0,0,0.151230923763239,0.15543720058278,0,0.159296767163702,0,0.155262956876259,0,0,0.521745061811734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.453411851024545,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0.279759015438889,1.24415452006595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0.733714394086716,0.231051332300676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0.255524855279191,0,0,0,0.227662191351298,0,0,0,0,0,0,0.222462803784138,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0.828864656652147,0,0.691259661814092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233939463462106,0,0,0,0,0,0.0771741581079447,0,0,0,0.235676547101626,0,0,0,0,0,0,0,0.178553938605658,0.352894871715692,0.0802413666891683,0,0,0,0,0,0,0,0.371995018166751,0,0,0,0,0,0,0,0,0.250707539292375,0,0,0,0,0,0,0.0645889098360061,0,0,0,0,0.217716747896961,0,0,0.286888821570705,0.332660356546013,0.0814032686109745,0.213454691755431,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr1:183201372..183201407,+ | |||
}} | }} |
Latest revision as of 01:09, 28 July 2015
Short description: | p@chr1:183201372..183201407, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:183201372..183201407, + |
Coexpression cluster: | C268_Mallassezderived_Urothelial_Gingival_Small_Bronchial_Tracheal_Prostate |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data