FFCP PHASE1:Hg19::chr2:129077518..129077535,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C12|description=CAGE_peak_at_chr2:129077518..129077535,-|id=chr2:129077518..129077535,-|ontology_enrichment_celltype=CL:0002274!4.90e-45!5;CL:0000457!4.90e-45!5;CL:0002191!4.90e-45!5;CL:0000097!4.90e-45!5;CL:0000831!4.90e-45!5;CL:0002028!4.90e-45!5;CL:0000163!5.07e-25!9|ontology_enrichment_celltype_v019=CL:0000097;2.34e-163;5!CL:0000163;3.38e-91;9!CL:0000151;2.49e-21;36!CL:0000346;3.24e-12;3!CL:1000428;3.24e-12;3!CL:0000766;6.63e-08;69!CL:0002559;7.49e-08;5|ontology_enrichment_celltype_v019_2=CL:0000097,2.34e-163,5;CL:0002028,2.34e-163,5;CL:0000163,3.38e-91,9;CL:0000151,2.31e-23,36;CL:0000839,8.32e-13,66;CL:0000557,1.26e-12,67;CL:0000346,3.24e-12,3;CL:1000428,3.24e-12,3;CL:0000766,8.59e-12,72;CL:0000763,4.95e-08,108;CL:0000049,4.95e-08,108;CL:0002559,7.49e-08,5;CL:0002031,2.87e-07,120|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002106!3.56e-12!3;UBERON:0004854!3.56e-12!3;UBERON:0009034!3.56e-12!3;UBERON:0002095!3.56e-12!3;UBERON:0004782!3.56e-12!3;UBERON:0003281!3.56e-12!3;UBERON:0009664!3.56e-12!3;UBERON:0002296!3.56e-12!3;UBERON:0005602!3.56e-12!3;UBERON:0001179!3.56e-12!3;UBERON:0006293!3.56e-12!3;UBERON:0002426!3.10e-10!1;UBERON:0003831!3.10e-10!1;UBERON:0003898!3.10e-10!1;UBERON:0004830!3.10e-10!1;UBERON:0001774!3.10e-10!1;UBERON:0003830!3.10e-10!1;UBERON:0005175!3.10e-10!1;UBERON:0003897!3.10e-10!1;UBERON:0001103!3.10e-10!1;UBERON:0010084!3.10e-10!1;UBERON:0001301!3.71e-10!1;UBERON:0002363!7.55e-10!1;UBERON:0007647!7.55e-10!1;UBERON:0010115!7.55e-10!1|ontology_enrichment_uberon_v019=UBERON:0000412;3.24e-12;3!UBERON:0001992;3.24e-12;3!UBERON:0002073;7.49e-08;5|ontology_enrichment_uberon_v019_2=UBERON:0000412,3.24e-12,3;UBERON:0001992,3.24e-12,3;UBERON:0002371,3.34e-11,76;UBERON:0001474,2.00e-10,82;UBERON:0004765,1.52e-09,90;UBERON:0002405,2.97e-09,93;UBERON:0002390,8.34e-09,98;UBERON:0003061,8.34e-09,98;UBERON:0001434,1.22e-08,100;UBERON:0002193,4.95e-08,108;UBERON:0002073,7.49e-08,5;UBERON:0005086,7.49e-08,5|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267540828089713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0,0,0,0,0,0,0,2.46331618947972,4.93071230474066,11.817702585824,6.62951785718023,6.05963680446624,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399158742865633,0.957526850661834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0.0939839179798536,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0,0.213233981900981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr2:129077518..129077535,-}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C12 | |||
|description=CAGE_peak_at_chr2:129077518..129077535,- | |||
|id=chr2:129077518..129077535,- | |||
|ontology_enrichment_celltype=CL:0002274!4.90e-45!5;CL:0000457!4.90e-45!5;CL:0002191!4.90e-45!5;CL:0000097!4.90e-45!5;CL:0000831!4.90e-45!5;CL:0002028!4.90e-45!5;CL:0000163!5.07e-25!9 | |||
|ontology_enrichment_celltype_v019=CL:0000097;2.34e-163;5!CL:0000163;3.38e-91;9!CL:0000151;2.49e-21;36!CL:0000346;3.24e-12;3!CL:1000428;3.24e-12;3!CL:0000766;6.63e-08;69!CL:0002559;7.49e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,2.34e-163,5;CL:0002028,2.34e-163,5;CL:0000163,3.38e-91,9;CL:0000151,2.31e-23,36;CL:0000839,8.32e-13,66;CL:0000557,1.26e-12,67;CL:0000346,3.24e-12,3;CL:1000428,3.24e-12,3;CL:0000766,8.59e-12,72;CL:0000763,4.95e-08,108;CL:0000049,4.95e-08,108;CL:0002559,7.49e-08,5;CL:0002031,2.87e-07,120 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002106!3.56e-12!3;UBERON:0004854!3.56e-12!3;UBERON:0009034!3.56e-12!3;UBERON:0002095!3.56e-12!3;UBERON:0004782!3.56e-12!3;UBERON:0003281!3.56e-12!3;UBERON:0009664!3.56e-12!3;UBERON:0002296!3.56e-12!3;UBERON:0005602!3.56e-12!3;UBERON:0001179!3.56e-12!3;UBERON:0006293!3.56e-12!3;UBERON:0002426!3.10e-10!1;UBERON:0003831!3.10e-10!1;UBERON:0003898!3.10e-10!1;UBERON:0004830!3.10e-10!1;UBERON:0001774!3.10e-10!1;UBERON:0003830!3.10e-10!1;UBERON:0005175!3.10e-10!1;UBERON:0003897!3.10e-10!1;UBERON:0001103!3.10e-10!1;UBERON:0010084!3.10e-10!1;UBERON:0001301!3.71e-10!1;UBERON:0002363!7.55e-10!1;UBERON:0007647!7.55e-10!1;UBERON:0010115!7.55e-10!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0000412;3.24e-12;3!UBERON:0001992;3.24e-12;3!UBERON:0002073;7.49e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000412,3.24e-12,3;UBERON:0001992,3.24e-12,3;UBERON:0002371,3.34e-11,76;UBERON:0001474,2.00e-10,82;UBERON:0004765,1.52e-09,90;UBERON:0002405,2.97e-09,93;UBERON:0002390,8.34e-09,98;UBERON:0003061,8.34e-09,98;UBERON:0001434,1.22e-08,100;UBERON:0002193,4.95e-08,108;UBERON:0002073,7.49e-08,5;UBERON:0005086,7.49e-08,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267540828089713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0,0,0,0,0,0,0,2.46331618947972,4.93071230474066,11.817702585824,6.62951785718023,6.05963680446624,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399158742865633,0.957526850661834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0.0939839179798536,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0,0.213233981900981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr2:129077518..129077535,- | |||
}} |
Revision as of 13:27, 12 September 2013
Short description: | p@chr2:129077518..129077535, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:129077518..129077535, - |
Coexpression cluster: | C12_Mast_Basophils_immature_chorionic_mature_CD14_Eosinophils |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 2.34e-163 | 5 |
basophil mast progenitor cell | 2.34e-163 | 5 |
endocrine cell | 3.38e-91 | 9 |
secretory cell | 2.31e-23 | 36 |
myeloid lineage restricted progenitor cell | 8.32e-13 | 66 |
granulocyte monocyte progenitor cell | 1.26e-12 | 67 |
hair follicle dermal papilla cell | 3.24e-12 | 3 |
stem cell of epidermis | 3.24e-12 | 3 |
myeloid leukocyte | 8.59e-12 | 72 |
myeloid cell | 4.95e-08 | 108 |
common myeloid progenitor | 4.95e-08 | 108 |
hair follicle cell | 7.49e-08 | 5 |
hematopoietic lineage restricted progenitor cell | 2.87e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
dermal papilla | 3.24e-12 | 3 |
papillary layer of dermis | 3.24e-12 | 3 |
bone marrow | 3.34e-11 | 76 |
bone element | 2.00e-10 | 82 |
skeletal element | 1.52e-09 | 90 |
immune system | 2.97e-09 | 93 |
hematopoietic system | 8.34e-09 | 98 |
blood island | 8.34e-09 | 98 |
skeletal system | 1.22e-08 | 100 |
hemolymphoid system | 4.95e-08 | 108 |
hair follicle | 7.49e-08 | 5 |
hair follicle placode | 7.49e-08 | 5 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.