FFCP PHASE1:Hg19::chr4:1160761..1160774,-: Difference between revisions
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|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002568;1.30e-19;1!CL:0002569;3.14e-13;6!CL:0002598;2.85e-10;2!CL:1000487;2.85e-10;2!CL:0000349;2.93e-09;19!CL:0002579;2.19e-07;3!CL:0002504;2.88e-07;3!CL:1000279;2.88e-07;3!CL:0002615;2.88e-07;3!CL:1000280;2.88e-07;3 | |ontology_enrichment_celltype_v019=CL:0002568;1.30e-19;1!CL:0002569;3.14e-13;6!CL:0002598;2.85e-10;2!CL:1000487;2.85e-10;2!CL:0000349;2.93e-09;19!CL:0002579;2.19e-07;3!CL:0002504;2.88e-07;3!CL:1000279;2.88e-07;3!CL:0002615;2.88e-07;3!CL:1000280;2.88e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002568,1.30e-19,1;CL:0002569,3.14e-13,6;CL:1000487,2.72e-10,2;CL:0002598,3.58e-10,2;CL:0000349,2.81e-09,19;CL:0002579,2.19e-07,3;CL:0002615,2.97e-07,3;CL:0002504,3.16e-07,3;CL:1000279,3.16e-07,3;CL:1000280,3.16e-07,3 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0003422;3.14e-13;6!UBERON:0003688;5.26e-13;6!UBERON:0002358;5.26e-13;6!UBERON:0003684;5.26e-13;6!UBERON:0001178;5.26e-13;6!UBERON:0003104;1.77e-11;7!UBERON:0009142;1.77e-11;7!UBERON:0004457;5.52e-09;9!UBERON:0000042;5.52e-09;9!UBERON:0002331;2.62e-08;10!UBERON:0000478;1.91e-07;24 | |ontology_enrichment_uberon_v019=UBERON:0003422;3.14e-13;6!UBERON:0003688;5.26e-13;6!UBERON:0002358;5.26e-13;6!UBERON:0003684;5.26e-13;6!UBERON:0001178;5.26e-13;6!UBERON:0003104;1.77e-11;7!UBERON:0009142;1.77e-11;7!UBERON:0004457;5.52e-09;9!UBERON:0000042;5.52e-09;9!UBERON:0002331;2.62e-08;10!UBERON:0000478;1.91e-07;24 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003422,3.14e-13,6;UBERON:0003688,5.42e-13,6;UBERON:0002358,5.42e-13,6;UBERON:0003684,5.42e-13,6;UBERON:0001178,5.42e-13,6;UBERON:0002331,2.62e-08,10;UBERON:0000358,2.62e-08,10;UBERON:0000307,2.62e-08,10;UBERON:0000091,2.62e-08,10;UBERON:0000087,2.62e-08,10;UBERON:0007010,2.62e-08,10;UBERON:0007806,2.62e-08,10;UBERON:0008780,2.62e-08,10;UBERON:0005728,2.62e-08,10;UBERON:0000478,1.84e-07,24;UBERON:0004457,5.98e-07,12;UBERON:0000042,5.98e-07,12 | |||
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|phase1_expression=0.726713517082227,0,1.26858963686374,0,0,0,0,0,0,0,0,0,0,0.247532705920093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302714855289863,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0.252433774244115,0.0920498986422993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.237270619111097,0,0,0,0,0,0.8231480226628,0,0,0,1.77236972004421,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.39523833576444,7.15312891703765,0.845302752556,1.59562869950922,0,0,0,0,0.285955987316295,9.76718889704597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394061520403854,0.215627574859517,0,0,0,0,0,0.637938751653163,0,0,0,0.36807447515742,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0.260650843404249,0,0,0,0.215714200818617,0,0,0,0,0.496215615637554,0.61384789315225,0,3.45975702990393,0.511707249066704,0,0,0,0,0.492762936082855,0,0,0,0,0,0.229628896329213,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429680979473094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02359116524534,0.855877976067841,0,0,1.07923474549989,0,0,0,0,0,0.48763373908959,0,0,1.50149902548784,0,0,0,0,0,0.578775534266688,0,0,0,0,0,0.0982490410131212,0,0.354761064070598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0.411362273086194,0,0,0,0,0,0,0,0,0.142283686696828,0,0,0,0,0,0,0,0,2.50634477090067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0.219385397153973,0,0,0.307801034015188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0,0,0,0.182454789215666,0,0,0,0,0,0,0,0,0,0.330991955875499,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.570930667089935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521745061811734,0.450772826991655,0,0,0,0,0.464033759878494,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.3062454773532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672567444437648,0,0,0,0.115233987555779,0,0,0,0,0,0.078493092850514,0,0,0,0,0.47775168788705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0.23806443146374,0,0,0,0,0.202117188958219,0,0,0,0,0.332660356546013,0,0,0,0,0,0.244482888365733,0.406896178315738,0,0,0 | ||
|short_description=p@chr4:1160761..1160774,- | |short_description=p@chr4:1160761..1160774,- | ||
}} | }} |
Revision as of 10:33, 18 November 2012
Short description: | p@chr4:1160761..1160774, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:1160761..1160774, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesenchymal stem cell of Wharton's jelly | 1.30e-19 | 1 |
mesenchymal stem cell of umbilical cord | 3.14e-13 | 6 |
smooth muscle cell of prostate | 2.72e-10 | 2 |
bronchial smooth muscle cell | 3.58e-10 | 2 |
extraembryonic cell | 2.81e-09 | 19 |
omentum preadipocyte | 2.19e-07 | 3 |
adipocyte of omentum tissue | 2.97e-07 | 3 |
enteric smooth muscle cell | 3.16e-07 | 3 |
smooth muscle cell of large intestine | 3.16e-07 | 3 |
smooth muscle cell of colon | 3.16e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
mesenchyme of umbilical cord | 3.14e-13 | 6 |
omentum | 5.42e-13 | 6 |
peritoneum | 5.42e-13 | 6 |
abdominal cavity | 5.42e-13 | 6 |
visceral peritoneum | 5.42e-13 | 6 |
umbilical cord | 2.62e-08 | 10 |
blastocyst | 2.62e-08 | 10 |
blastula | 2.62e-08 | 10 |
bilaminar disc | 2.62e-08 | 10 |
inner cell mass | 2.62e-08 | 10 |
cleaving embryo | 2.62e-08 | 10 |
connecting stalk | 2.62e-08 | 10 |
inner cell mass derived epiblast | 2.62e-08 | 10 |
extraembryonic mesoderm | 2.62e-08 | 10 |
extraembryonic structure | 1.84e-07 | 24 |
cavity lining | 5.98e-07 | 12 |
serous membrane | 5.98e-07 | 12 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.