FFCP PHASE1:Hg19::chr4:75230459..75230466,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2069 | |EntrezGene=2069 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3443 | |HGNC=3443 | ||
|TSSclassifier=strong | |||
|UniProt=O14944,B2RC66 | |UniProt=O14944,B2RC66 | ||
|association_with_transcript=-393bp_to_ENST00000244869,NM_001432,uc003hid.2,uc003hie.1_5end | |association_with_transcript=-393bp_to_ENST00000244869,NM_001432,uc003hid.2,uc003hie.1_5end | ||
|cluster_id=chr4:75230459..75230466,+ | |||
|coexpression_cluster_id=C0 | |coexpression_cluster_id=C0 | ||
|description=CAGE_peak_3_at_EREG_5end | |description=CAGE_peak_3_at_EREG_5end | ||
|id=chr4:75230459..75230466,+ | |id=chr4:75230459..75230466,+ | ||
|ontology_enrichment_celltype=CL:0002057!1.74e-53!42;CL:0000860!4.02e-49!45;CL:0002194!1.90e-35!63;CL:0000576!1.90e-35!63;CL:0000040!1.90e-35!63;CL:0000559!1.90e-35!63;CL:0002009!5.28e-34!65;CL:0000766!6.98e-33!76;CL:0000839!9.31e-31!70;CL:0000557!3.66e-30!71;CL:0000763!4.33e-23!112;CL:0000049!4.33e-23!112;CL:0002087!1.12e-16!119;CL:0000738!3.15e-16!140;CL:0000037!9.75e-15!172;CL:0000566!9.75e-15!172;CL:0000988!5.18e-14!182;CL:0002031!1.34e-12!124;CL:0002032!1.11e-11!165;CL:0000837!1.11e-11!165;CL:0000063!1.82e-08!578 | |ontology_enrichment_celltype=CL:0002057!1.74e-53!42;CL:0000860!4.02e-49!45;CL:0002194!1.90e-35!63;CL:0000576!1.90e-35!63;CL:0000040!1.90e-35!63;CL:0000559!1.90e-35!63;CL:0002009!5.28e-34!65;CL:0000766!6.98e-33!76;CL:0000839!9.31e-31!70;CL:0000557!3.66e-30!71;CL:0000763!4.33e-23!112;CL:0000049!4.33e-23!112;CL:0002087!1.12e-16!119;CL:0000738!3.15e-16!140;CL:0000037!9.75e-15!172;CL:0000566!9.75e-15!172;CL:0000988!5.18e-14!182;CL:0002031!1.34e-12!124;CL:0002032!1.11e-11!165;CL:0000837!1.11e-11!165;CL:0000063!1.82e-08!578 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.05e-89;33!CL:0002057;3.05e-89;33!CL:0000473;2.54e-64;39!CL:0000234;2.54e-64;39!CL:0000576;5.62e-49;48!CL:0000766;1.76e-33;69!CL:0000763;3.91e-13;100!CL:0002087;7.52e-13;104!CL:0000738;1.96e-09;136!CL:0000988;6.84e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.11e-89,42;CL:0002057,1.11e-89,42;CL:0000473,2.58e-84,48;CL:0000234,2.58e-84,48;CL:0002194,6.74e-72,59;CL:0000576,6.74e-72,59;CL:0000040,6.74e-72,59;CL:0000559,6.74e-72,59;CL:0002009,2.02e-69,61;CL:0000839,7.07e-64,66;CL:0000557,7.26e-63,67;CL:0000766,3.18e-58,72;CL:0002087,1.17e-37,115;CL:0000763,2.34e-37,108;CL:0000049,2.34e-37,108;CL:0002031,3.73e-33,120;CL:0000738,4.20e-31,136;CL:0000037,3.07e-24,168;CL:0002032,1.76e-23,161;CL:0000837,1.76e-23,161;CL:0000988,9.45e-23,177;CL:0000134,1.09e-09,354;CL:0002320,2.14e-09,361;CL:0000219,2.32e-08,386;CL:0000048,4.33e-07,427;CL:0000723,6.49e-07,433 | |||
|ontology_enrichment_development_v019=CL:0002057;4.09e-64;42!CL:0000049;3.35e-09;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0060085;2.17e-07;1!DOID:3165;2.17e-07;1!DOID:0060121;2.17e-07;1!DOID:2438;2.17e-07;1!DOID:4418;2.17e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060085,1.80e-07,1;DOID:3165,1.80e-07,1;DOID:0060121,1.80e-07,1;DOID:2438,1.80e-07,1;DOID:4418,1.80e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0002371!4.78e-27!80;UBERON:0001474!2.37e-24!86;UBERON:0002390!1.08e-22!102;UBERON:0003061!1.08e-22!102;UBERON:0004765!1.32e-21!101;UBERON:0001434!1.32e-21!101;UBERON:0002193!7.75e-21!112;UBERON:0002405!1.33e-17!115;UBERON:0002204!4.14e-12!167;UBERON:0003081!3.76e-09!216;UBERON:0000926!5.70e-08!448;UBERON:0004120!5.70e-08!448;UBERON:0006603!5.70e-08!448 | |ontology_enrichment_uberon=UBERON:0002371!4.78e-27!80;UBERON:0001474!2.37e-24!86;UBERON:0002390!1.08e-22!102;UBERON:0003061!1.08e-22!102;UBERON:0004765!1.32e-21!101;UBERON:0001434!1.32e-21!101;UBERON:0002193!7.75e-21!112;UBERON:0002405!1.33e-17!115;UBERON:0002204!4.14e-12!167;UBERON:0003081!3.76e-09!216;UBERON:0000926!5.70e-08!448;UBERON:0004120!5.70e-08!448;UBERON:0006603!5.70e-08!448 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.06e-55,76;UBERON:0001474,1.29e-50,82;UBERON:0004765,9.89e-46,90;UBERON:0002390,5.42e-45,98;UBERON:0003061,5.42e-45,98;UBERON:0002405,4.10e-44,93;UBERON:0001434,1.04e-40,100;UBERON:0002193,2.11e-40,108;UBERON:0002204,1.85e-22,167;UBERON:0003081,3.47e-19,203;UBERON:0000926,1.67e-10,315;UBERON:0004120,1.67e-10,315;UBERON:0006603,1.67e-10,315;UBERON:0002384,5.38e-09,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.436882744260345,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0.767658796194425,0.619264493264304,0,0,0.739508020333575,0,0,0.293600439334847,0.553995408531877,1.00272223735071,2.60413044859022,0,0,0,0.726991193897824,0.755751887377619,0.970336244751265,2.55671940596253,1.23350366406548,2.78735733805593,2.3015391385772,2.0492856522328,2.83778675866302,5.17118521104928,0.645484683583826,0,1.88242339542605,1.09162460023138,3.37085226667627,5.50951006267625,3.20929027076094,5.75403413219137,0,0.398927315243264,1.70489900213078,3.77272010217159,2.26954089876456,8.09668923694247,2.00998932205395,2.60741459210101,1.95469960234605,2.42159801053347,4.05105399586321,3.16462387440884,0,0.637812899895131,0.209658645508376,0.112328631146495,0.300353785683013,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0,0.103325781175765,0,0,0,0.718618141816238,0,0,0.277064115484183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.237270619111097,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93733833986777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.65147236858747,0,0,0,0,0,1.2162378064119,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.347534457872331,0,0,0.413536052245775,1.2942852049117,0.533637789017222,0,0,0,0,0,0,0,0,0,0,0,0,0.328508624055237,1.55776328755086,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0.541892875087706,0,0.254876273045038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308097234229289,0,0,0,0,0,0,0,0.192190067365106,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318203247925937,0,0,0,0,0,0,0,0,0.731140468893853,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0,0,0,0,0,0,0,0,1.08890984861323,0,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.71623345421307,0,0.307160702099232,0,0,0.333926115068718,0,0,0,0,0,0,0,0,0.718946809178615,0,0,0,0,0,0,0,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166211681900156,0,0.19606253431774,0,0,0.317873157960757,0,1.14262965711403,0.141353071433941,0,0,0,0,0,0,0,0,0,0,0,0,0.242780379534093,0,0,0,0,0,0,0,0,0.313932918407225,0,0,0,0,0.195984794828755,0,0,0,0,0,0,0,0,0,0,1.78843150532691,0,0,0,0.213452994739353,0,0.144090417154106,0.458146384663663,0,0.720273989940749,0.372757606696298,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105600336519406,0,0,0,0,0,0,0,0,0,0.328370082997356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.554805861502613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115525666150338,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0.175871244359621,0,0,0,0,0,0,0,0.685952037749674,0,0,0.354581522651905,0.111231401892069,0,0,0.280272163313789,0,0,0,0,0,0,0,0,0.207216164163037,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160482733378337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.407016343054873,0,1.9307228228694,0.179650404213174,0,0,0,0,0,0 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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.436882744260345,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0.767658796194425,0.619264493264304,0,0,0.739508020333575,0,0,0.293600439334847,0.553995408531877,1.00272223735071,2.60413044859022,0,0,0,0.726991193897824,0.755751887377619,0.970336244751265,2.55671940596253,1.23350366406548,2.78735733805593,2.3015391385772,2.0492856522328,2.83778675866302,5.17118521104928,0.645484683583826,0,1.88242339542605,1.09162460023138,3.37085226667627,5.50951006267625,3.20929027076094,5.75403413219137,0,0.398927315243264,1.70489900213078,3.77272010217159,2.26954089876456,8.09668923694247,2.00998932205395,2.60741459210101,1.95469960234605,2.42159801053347,4.05105399586321,3.16462387440884,0,0.637812899895131,0.209658645508376,0.112328631146495,0.300353785683013,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0,0.103325781175765,0,0,0,0.718618141816238,0,0,0.277064115484183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.237270619111097,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93733833986777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.65147236858747,0,0,0,0,0,1.2162378064119,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.347534457872331,0,0,0.413536052245775,1.2942852049117,0.533637789017222,0,0,0,0,0,0,0,0,0,0,0,0,0.328508624055237,1.55776328755086,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0.541892875087706,0,0.254876273045038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308097234229289,0,0,0,0,0,0,0,0.192190067365106,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318203247925937,0,0,0,0,0,0,0,0,0.731140468893853,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0,0,0,0,0,0,0,0,1.08890984861323,0,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.71623345421307,0,0.307160702099232,0,0,0.333926115068718,0,0,0,0,0,0,0,0,0.718946809178615,0,0,0,0,0,0,0,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166211681900156,0,0.19606253431774,0,0,0.317873157960757,0,1.14262965711403,0.141353071433941,0,0,0,0,0,0,0,0,0,0,0,0,0.242780379534093,0,0,0,0,0,0,0,0,0.313932918407225,0,0,0,0,0.195984794828755,0,0,0,0,0,0,0,0,0,0,1.78843150532691,0,0,0,0.213452994739353,0,0.144090417154106,0.458146384663663,0,0.720273989940749,0.372757606696298,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105600336519406,0,0,0,0,0,0,0,0,0,0.328370082997356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.554805861502613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115525666150338,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0.175871244359621,0,0,0,0,0,0,0,0.685952037749674,0,0,0.354581522651905,0.111231401892069,0,0,0.280272163313789,0,0,0,0,0,0,0,0,0.207216164163037,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160482733378337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.407016343054873,0,1.9307228228694,0.179650404213174,0,0,0,0,0,0 | ||
|short_description=p3@EREG | |short_description=p3@EREG | ||
}} | }} |
Latest revision as of 15:48, 18 September 2015
Short description: | p3@EREG |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_EREG_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | -393bp_to_ENST00000244869, NM_001432, uc003hid.2, uc003hie.1_5end |
EntrezGene: | EREG |
HGNC: | 3443 |
UniProt: | O14944B2RC66 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.11e-89 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.11e-89 | 42 |
defensive cell | 2.58e-84 | 48 |
phagocyte | 2.58e-84 | 48 |
monopoietic cell | 6.74e-72 | 59 |
monocyte | 6.74e-72 | 59 |
monoblast | 6.74e-72 | 59 |
promonocyte | 6.74e-72 | 59 |
macrophage dendritic cell progenitor | 2.02e-69 | 61 |
myeloid lineage restricted progenitor cell | 7.07e-64 | 66 |
granulocyte monocyte progenitor cell | 7.26e-63 | 67 |
myeloid leukocyte | 3.18e-58 | 72 |
nongranular leukocyte | 1.17e-37 | 115 |
myeloid cell | 2.34e-37 | 108 |
common myeloid progenitor | 2.34e-37 | 108 |
hematopoietic lineage restricted progenitor cell | 3.73e-33 | 120 |
leukocyte | 4.20e-31 | 136 |
hematopoietic stem cell | 3.07e-24 | 168 |
hematopoietic oligopotent progenitor cell | 1.76e-23 | 161 |
hematopoietic multipotent progenitor cell | 1.76e-23 | 161 |
hematopoietic cell | 9.45e-23 | 177 |
mesenchymal cell | 1.09e-09 | 354 |
connective tissue cell | 2.14e-09 | 361 |
motile cell | 2.32e-08 | 386 |
multi fate stem cell | 4.33e-07 | 427 |
somatic stem cell | 6.49e-07 | 433 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.06e-55 | 76 |
bone element | 1.29e-50 | 82 |
skeletal element | 9.89e-46 | 90 |
hematopoietic system | 5.42e-45 | 98 |
blood island | 5.42e-45 | 98 |
immune system | 4.10e-44 | 93 |
skeletal system | 1.04e-40 | 100 |
hemolymphoid system | 2.11e-40 | 108 |
musculoskeletal system | 1.85e-22 | 167 |
lateral plate mesoderm | 3.47e-19 | 203 |
mesoderm | 1.67e-10 | 315 |
mesoderm-derived structure | 1.67e-10 | 315 |
presumptive mesoderm | 1.67e-10 | 315 |
connective tissue | 5.38e-09 | 371 |
Ontology term | p-value | n |
---|---|---|
organ system benign neoplasm | 1.80e-07 | 1 |
skin benign neoplasm | 1.80e-07 | 1 |
integumentary system benign neoplasm | 1.80e-07 | 1 |
dermis tumor | 1.80e-07 | 1 |
cutaneous fibrous histiocytoma | 1.80e-07 | 1 |