FFCP PHASE1:Hg19::chr9:113137742..113137746,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr9:113137742..113137746,- to FFCP PHASE1:Hg19::chr9:113137742..113137746,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr9:113137742..113137746,- | |||
|description=CAGE_peak_at_chr9:113137742..113137746,- | |||
|id=chr9:113137742..113137746,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002504;7.66e-22;3!CL:1000279;7.66e-22;3!CL:1000280;7.66e-22;3!CL:0002615;2.06e-10;3!CL:0000136;6.43e-09;13!CL:0002616;1.97e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002504,4.66e-22,3;CL:1000279,4.66e-22,3;CL:1000280,4.66e-22,3;CL:0002615,3.64e-10,3;CL:0002616,1.27e-08,1;CL:0000136,9.95e-08,15 | |||
|ontology_enrichment_development_v019=UBERON:0006215;3.23e-22;3!UBERON:0003124;8.13e-09;1!UBERON:0005425;1.97e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3112;1.97e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3112,1.71e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.75e-17!115;UBERON:0001049!9.74e-09!57;UBERON:0005068!9.74e-09!57;UBERON:0006241!9.74e-09!57;UBERON:0007135!9.74e-09!57;UBERON:0004457!1.20e-07!12;UBERON:0000042!1.20e-07!12;UBERON:0002616!2.06e-07!59;UBERON:0001017!7.06e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;5.64e-13;9!UBERON:0000042;5.64e-13;9!UBERON:0002037;2.14e-11;6!UBERON:0003688;3.28e-11;6!UBERON:0002358;3.28e-11;6!UBERON:0003684;3.28e-11;6!UBERON:0001178;3.28e-11;6!UBERON:0004732;4.99e-09;13!UBERON:0002134;1.97e-08;1!UBERON:0000941;1.97e-08;1!UBERON:0001785;1.97e-08;1!UBERON:0002464;1.97e-08;1!UBERON:0004904;1.97e-08;1!UBERON:0001021;1.97e-08;1!UBERON:0005208;1.97e-08;1!UBERON:0004145;1.97e-08;1!UBERON:0005946;1.97e-08;1!UBERON:0005965;1.97e-08;1!UBERON:0002078;1.97e-08;1!UBERON:0002680;9.35e-08;9!UBERON:0001895;9.35e-08;9!UBERON:0001155;1.23e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,2.23e-11,6;UBERON:0006215,2.23e-11,6;UBERON:0003688,6.61e-11,6;UBERON:0002358,6.61e-11,6;UBERON:0003684,6.61e-11,6;UBERON:0001178,6.61e-11,6;UBERON:0004457,1.43e-09,12;UBERON:0000042,1.43e-09,12;UBERON:0004732,5.11e-09,13;UBERON:0002134,1.84e-08,1;UBERON:0005208,1.84e-08,1;UBERON:0005946,1.84e-08,1;UBERON:0005965,1.84e-08,1;UBERON:0002078,1.84e-08,1;UBERON:0000941,1.98e-08,1;UBERON:0001785,1.98e-08,1;UBERON:0002464,1.98e-08,1;UBERON:0004904,1.98e-08,1;UBERON:0001021,1.98e-08,1;UBERON:0003902,1.98e-08,1;UBERON:0005425,1.98e-08,1;UBERON:0002680,9.58e-08,9;UBERON:0001895,9.58e-08,9;UBERON:0010092,9.58e-08,9;UBERON:0001155,1.05e-07,9 | |||
|phase1_expression=1.63510541343501,0.214100523890983,0.281908808191942,1.0007329835313,1.34088328328186,1.74467704820074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267540828089713,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0.724232594804119,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264818361626438,0.573673241497627,0,0,0,0,0.311211035399766,0,0,0,0,0,0,0.570471821544449,0.298897361103602,0,0,0,0.408308342509787,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0.213557388818567,0,0.300091096084402,0.103052529238439,0,0,0,0.194874010322397,0.757301322732344,0.736399189138395,0,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0.928735856063958,0,0,0,0,0,0.217879444092406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0.285955987316295,0,0,0,0.355391948742546,0,0.301439377059586,0,0.199945982364114,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,3.90419561572865,0,0,0.637938751653163,0,0,0,0,0,0,0,0.713715955188647,0.788512075169673,0,0,0,0,0.664225598535437,0,0.521301686808497,0,0,0,0,0,0,0,0,0.496215615637554,0.61384789315225,0,0.128139149255701,1.02341449813341,0,0,0,0,0,0,0,0,0,0,0,0.364182336013434,0.524497659837696,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.19427136107939,0,0.082509499920588,0,0,0,0,0.154048617114644,0.767518373630648,0.137836572484531,0.322260734604821,0,0.170453254832202,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,1.79872457583315,1.64722217841633,1.06031162111118,0,0,0,0,0,0,0.136499911407986,0.707027159768564,0,0,0,0,0,0,0,0,0,0,0,0,0,2.11107635297664,0.658589785919804,0,0,0,0,0,1.97701981631236,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324621940274555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.4098700508785,0,1.02555725490326,0,0,0,0,0,0,0,0.562677665642051,0,0,0.211125408127993,0.19924798825107,0,0,0.920418142519393,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0.344743373241465,0,0,0.885741385813839,0.241192877250816,1.52581736317083,1.3269511191747,2.06883333267483,0,0,0.139423744278603,0.384751292518985,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.353830258013357,0,0.593042257361244,0,0,0.134802265961354,0.802577647298789,0,0,0.19566461893209,0,0.789168805698781,0,0.30607276163049,0.821425535170343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,0.126621591911757,0,0,0,0.39961921916426,0,0,0,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0,0.558564802544508,0.229160424011684,1.43574604915363,0.199679000498991,0,0.223171457441873,0.134366944973453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0.157611414598396,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0.129282956361551,0,0.171086837884329,0,0.213574825135389,1.10043013569766,0.414239055347196,0.992332043623902,0,0,0,0.544017803369474,0.7520696820681,0,0,0,0,0,0.250381861413,0,0,0.18628920882415,0,0,0,0.285465333544967,0,0,0,0,0,0,0,0.251567901752575,0,0.228840068396924,0.756154618816195,0.15543720058278,0,0,0,0,0,0,1.04349012362347,0,3.04644169735036,0,0,0,0.464033759878494,3.18476710958893,0,0,0,0,0,0,0,0,0,0,0,0,0.219284049578707,0,0,0.168942440653073,0,0,0,0.414775308455192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247871528518004,0,0,0,0,0.352675943690684,1.8374728641192,0.192687675289379,0,0,0.41023272848151,0.504143392443436,0,0.161475645631851,1.42769420259154,0.294443155503077,0,0.183428598521679,0,0,0,0,0,0,0,0,1.47394725759087,0,0.135075169236789,0,0.206686796501184,0.0634158101939068,0,0,0.496211178389294,0,0.383287282918786,0,0,0,0.455324382702595,2.66107110487917,0,0,0.203909198930495,0.0657727735628491,0,0,0.078493092850514,0,0,0,0,0,0.142953088353313,0,0,0,0.801711364730253,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0.196300467230486,0,0,0.102662806856247,0,0.485710993059139,0,0,0,0.45178432815584,0,0,0.0771741581079447,0,0,0.245148321753905,0,0.196308467114945,0.297046400327086,0,0,0.281951753939561,0,0,0.178553938605658,0,0,0.730336388246517,0,0.143339583151451,0.315543124386369,0,0,0,0.371995018166751,0.462175628631418,0,0,0,1.0135880080915,0,0,0.18378979906969,0,0,0.267964130156178,0.829169439458779,0.20686599172379,0,0.476128862927481,0,0.0620747142958579,0,0.12729431655633,0,0,0,0,0.215166616178029,0.99798106963804,0,0,1.9307228228694,0,0,0.244482888365733,0,0,0,0 | |phase1_expression=1.63510541343501,0.214100523890983,0.281908808191942,1.0007329835313,1.34088328328186,1.74467704820074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267540828089713,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0.724232594804119,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264818361626438,0.573673241497627,0,0,0,0,0.311211035399766,0,0,0,0,0,0,0.570471821544449,0.298897361103602,0,0,0,0.408308342509787,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0.213557388818567,0,0.300091096084402,0.103052529238439,0,0,0,0.194874010322397,0.757301322732344,0.736399189138395,0,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0.928735856063958,0,0,0,0,0,0.217879444092406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0.285955987316295,0,0,0,0.355391948742546,0,0.301439377059586,0,0.199945982364114,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,3.90419561572865,0,0,0.637938751653163,0,0,0,0,0,0,0,0.713715955188647,0.788512075169673,0,0,0,0,0.664225598535437,0,0.521301686808497,0,0,0,0,0,0,0,0,0.496215615637554,0.61384789315225,0,0.128139149255701,1.02341449813341,0,0,0,0,0,0,0,0,0,0,0,0.364182336013434,0.524497659837696,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.19427136107939,0,0.082509499920588,0,0,0,0,0.154048617114644,0.767518373630648,0.137836572484531,0.322260734604821,0,0.170453254832202,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,1.79872457583315,1.64722217841633,1.06031162111118,0,0,0,0,0,0,0.136499911407986,0.707027159768564,0,0,0,0,0,0,0,0,0,0,0,0,0,2.11107635297664,0.658589785919804,0,0,0,0,0,1.97701981631236,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324621940274555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.4098700508785,0,1.02555725490326,0,0,0,0,0,0,0,0.562677665642051,0,0,0.211125408127993,0.19924798825107,0,0,0.920418142519393,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0.344743373241465,0,0,0.885741385813839,0.241192877250816,1.52581736317083,1.3269511191747,2.06883333267483,0,0,0.139423744278603,0.384751292518985,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.353830258013357,0,0.593042257361244,0,0,0.134802265961354,0.802577647298789,0,0,0.19566461893209,0,0.789168805698781,0,0.30607276163049,0.821425535170343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,0.126621591911757,0,0,0,0.39961921916426,0,0,0,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0,0.558564802544508,0.229160424011684,1.43574604915363,0.199679000498991,0,0.223171457441873,0.134366944973453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0.157611414598396,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0.129282956361551,0,0.171086837884329,0,0.213574825135389,1.10043013569766,0.414239055347196,0.992332043623902,0,0,0,0.544017803369474,0.7520696820681,0,0,0,0,0,0.250381861413,0,0,0.18628920882415,0,0,0,0.285465333544967,0,0,0,0,0,0,0,0.251567901752575,0,0.228840068396924,0.756154618816195,0.15543720058278,0,0,0,0,0,0,1.04349012362347,0,3.04644169735036,0,0,0,0.464033759878494,3.18476710958893,0,0,0,0,0,0,0,0,0,0,0,0,0.219284049578707,0,0,0.168942440653073,0,0,0,0.414775308455192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247871528518004,0,0,0,0,0.352675943690684,1.8374728641192,0.192687675289379,0,0,0.41023272848151,0.504143392443436,0,0.161475645631851,1.42769420259154,0.294443155503077,0,0.183428598521679,0,0,0,0,0,0,0,0,1.47394725759087,0,0.135075169236789,0,0.206686796501184,0.0634158101939068,0,0,0.496211178389294,0,0.383287282918786,0,0,0,0.455324382702595,2.66107110487917,0,0,0.203909198930495,0.0657727735628491,0,0,0.078493092850514,0,0,0,0,0,0.142953088353313,0,0,0,0.801711364730253,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0.196300467230486,0,0,0.102662806856247,0,0.485710993059139,0,0,0,0.45178432815584,0,0,0.0771741581079447,0,0,0.245148321753905,0,0.196308467114945,0.297046400327086,0,0,0.281951753939561,0,0,0.178553938605658,0,0,0.730336388246517,0,0.143339583151451,0.315543124386369,0,0,0,0.371995018166751,0.462175628631418,0,0,0,1.0135880080915,0,0,0.18378979906969,0,0,0.267964130156178,0.829169439458779,0.20686599172379,0,0.476128862927481,0,0.0620747142958579,0,0.12729431655633,0,0,0,0,0.215166616178029,0.99798106963804,0,0,1.9307228228694,0,0,0.244482888365733,0,0,0,0 | ||
|short_description=p@chr9:113137742..113137746,- | |||
}} | }} |
Latest revision as of 21:39, 31 July 2015
Short description: | p@chr9:113137742..113137746, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:113137742..113137746, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
enteric smooth muscle cell | 4.66e-22 | 3 |
smooth muscle cell of large intestine | 4.66e-22 | 3 |
smooth muscle cell of colon | 4.66e-22 | 3 |
adipocyte of omentum tissue | 3.64e-10 | 3 |
perirenal adipocyte cell | 1.27e-08 | 1 |
fat cell | 9.95e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
cerebellum | 2.23e-11 | 6 |
rhombic lip | 2.23e-11 | 6 |
omentum | 6.61e-11 | 6 |
peritoneum | 6.61e-11 | 6 |
abdominal cavity | 6.61e-11 | 6 |
visceral peritoneum | 6.61e-11 | 6 |
cavity lining | 1.43e-09 | 12 |
serous membrane | 1.43e-09 | 12 |
segmental subdivision of nervous system | 5.11e-09 | 13 |
tricuspid valve | 1.84e-08 | 1 |
right atrium valve | 1.84e-08 | 1 |
outflow tract of atrium | 1.84e-08 | 1 |
outflow part of right atrium | 1.84e-08 | 1 |
right cardiac atrium | 1.84e-08 | 1 |
cranial nerve II | 1.98e-08 | 1 |
cranial nerve | 1.98e-08 | 1 |
nerve trunk | 1.98e-08 | 1 |
nerve connecting eye with brain | 1.98e-08 | 1 |
nerve | 1.98e-08 | 1 |
retinal neural layer | 1.98e-08 | 1 |
presumptive neural retina | 1.98e-08 | 1 |
regional part of metencephalon | 9.58e-08 | 9 |
metencephalon | 9.58e-08 | 9 |
future metencephalon | 9.58e-08 | 9 |
colon | 1.05e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
papillary adenocarcinoma | 1.71e-08 | 1 |