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UBERON:0000477

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Name:anatomical cluster
Namespace:FANTOM
Definition:"Anatomical group that has its parts adjacent to one another." [CARO:MAH]
Xrefs:
links:

AAO:0010009
AEO:0000041
BILA:0000041
CARO:0000041
EHDAA2:0003041
FBbt:00007277
FMA:49443
HAO:0000041
TADS:0000605
TAO:0001478
TGMA:0001842
VHOG:0001737
XAO:0003160

ZFA:0001478
Alt_id: UBERON:CARO_0000041-FMA_49443-ZFA_0001478
Subset: disjointness_axiom_removed
upper_level

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:UBERON:0000480(anatomical group)



Children

is a:UBERON:0000170 (pair of lungs),UBERON:0000349 (limbic system),UBERON:0001353 (anal region),UBERON:0001556 (lower urinary tract),UBERON:0001737 (larynx),UBERON:0001839 (bony labyrinth),UBERON:0001844 (cochlea),UBERON:0001846 (internal ear),UBERON:0002049 (vasculature),UBERON:0002275 (reticular formation),UBERON:0002303 (juxtaglomerular apparatus),UBERON:0002465 (lymphoid system),UBERON:0002680 (regional part of metencephalon),UBERON:0003112 (olfactory region),UBERON:0003672 (dentition),UBERON:0004088 (ocular region),UBERON:0004111 (anatomical conduit),UBERON:0004288 (skeleton),UBERON:0004770 (articular system),UBERON:0004905 (articulation),UBERON:0005162 (multi cell component structure),UBERON:0005352 (spermatic cord),UBERON:0006558 (lymphatic part of lymphoid system),UBERON:0008814 (pharyngeal arch system),UBERON:0009142 (entire embryonic mesenchyme),UBERON:0009664 (gut mesentery),UBERON:0009751 (cardiac mesenchyme),UBERON:0009899 (pole of cerebral hemisphere),UBERON:0010743 (meningeal cluster),UBERON:0011143 (upper urinary tract),UBERON:0011216 (organ system subdivision),UBERON:0011595 (jaw region),UBERON:0011932 (pilosebaceous unit),UBERON:0012361 (internal anal region),UBERON:0012469 (external anal region),UBERON:0015238 (pineal complex),UBERON:0015827 (brainstem reticular formation)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology


Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0000477 (anatomical cluster), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data


No analysis results