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UBERON:0000072

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Name:segment of respiratory tract
Namespace:FANTOM
Definition:"An organ segment that is part of a respiratory tract [Obol]." [OBOL:automatic]
Xrefs:
links:
MA:0000434
Synonyms: "respiratory tract" RELATED [MA:0000434]
Comments:Note that MA:0000434 has subclasses upper and lower, so it corresponds to a segment of the tract, rather than the tract as a whole

Ontology association
Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.

link to ontology dataset
data


Parents

is_a:UBERON:0000063(organ segment),UBERON:0004119(endoderm-derived structure)
part_of:UBERON:0000065(respiratory tract)



Children

is a:UBERON:0001557 (upper respiratory tract),UBERON:0001558 (lower respiratory tract),UBERON:0002186 (bronchiole)
part of:UBERON:0004802 (respiratory tract epithelium)

Ontology Tree: Loaded from BioPortal


FF samples
It includes FANTOM5 samples that overlay the Uberon ontology


Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0000072 (segment of respiratory tract), sorted by p-values
Analyst: Hideya Kawaji

link to source dataset
human : data
mouse : data


P-valueFFCPShort description
6.59e-58FFCP PHASE2:Mm9::chr6:41483113..41483131,+#_5669da61545a854c3a0d12d74ce419c3p4@uc009bpa.1
6.59e-58FFCP PHASE1:Mm9::chr6:41483113..41483131,+#_5669da61545a854c3a0d12d74ce419c3p4@uc009bpa.1
4.47e-57FFCP PHASE1:Mm9::chr6:41483037..41483046,+#_5a405d23179773a8be9cdb73cbeb8831p8@uc009bpa.1
4.47e-57FFCP PHASE2:Mm9::chr6:41483037..41483046,+#_5a405d23179773a8be9cdb73cbeb8831p8@uc009bpa.1
1.73e-55FFCP PHASE2:Mm9::chr6:41485075..41485096,+#_efe78cfa36f93121935dd5deaa0af182p1@ENSMUST00000103288, p1@uc009bpl.1
1.73e-55FFCP PHASE1:Mm9::chr6:41485075..41485096,+#_efe78cfa36f93121935dd5deaa0af182p1@ENSMUST00000103288, p1@uc009bpl.1
1.82e-54FFCP PHASE1:Mm9::chr6:41491752..41491776,-#_fcf46c76edce8a88518945785d677c2fp@chr6:41491752..41491776, -
1.82e-54FFCP PHASE2:Mm9::chr6:41491752..41491776,-#_fcf46c76edce8a88518945785d677c2fp@chr6:41491752..41491776, -
1.82e-54FFCP PHASE2:Mm9::chr12:108361918..108361930,-#_fcf46c76edce8a88518945785d677c2fp@chr12:108361918..108361930, -
1.82e-54FFCP PHASE1:Mm9::chr12:108361918..108361930,-#_fcf46c76edce8a88518945785d677c2fp@chr12:108361918..108361930, -
2.68e-53FFCP PHASE2:Mm9::chr6:41483173..41483188,+#_b4c83541cfa3bae6d09d33e32ba86bf2p2@ENSMUST00000103283
2.68e-53FFCP PHASE1:Mm9::chr6:41483173..41483188,+#_b4c83541cfa3bae6d09d33e32ba86bf2p2@ENSMUST00000103283
3.26e-53FFCP PHASE1:Mm9::chr6:41484803..41484826,+#_aa81a274d688877b02964924f7d1d45ap1@ENSMUST00000103287, p1@uc009bpi.1, p1@uc009bpj.1
3.26e-53FFCP PHASE2:Mm9::chr6:41484803..41484826,+#_aa81a274d688877b02964924f7d1d45ap1@ENSMUST00000103287, p1@uc009bpi.1, p1@uc009bpj.1
3.39e-52FFCP PHASE2:Mm9::chr9:44807434..44807445,-#_18efd7303b8ff2fd249ab88e2529c37bp@chr9:44807434..44807445, -
3.39e-52FFCP PHASE1:Mm9::chr9:44807434..44807445,-#_18efd7303b8ff2fd249ab88e2529c37bp@chr9:44807434..44807445, -
3.7e-52FFCP PHASE1:Mm9::chr6:41494001..41494028,+#_759f4bd995e7d7fe5277120a3cb6c955p@chr6:41494001..41494028, +
3.7e-52FFCP PHASE2:Mm9::chr6:41494001..41494028,+#_759f4bd995e7d7fe5277120a3cb6c955p@chr6:41494001..41494028, +
8.3e-52FFCP PHASE2:Mm9::chr2:11093788..11093799,+#_c7b10129a875aeb77e16e4d941e9fcb3p11@Prkcq
8.3e-52FFCP PHASE1:Mm9::chr2:11093788..11093799,+#_c7b10129a875aeb77e16e4d941e9fcb3p11@Prkcq
8.95e-52FFCP PHASE1:Mm9::chr9:44809185..44809215,-#_6e1726dc5d6e5d6abd80d9d850ca4006p@chr9:44809185..44809215, -
8.95e-52FFCP PHASE2:Mm9::chr9:44809185..44809215,-#_6e1726dc5d6e5d6abd80d9d850ca4006p@chr9:44809185..44809215, -
1.93e-51FFCP PHASE1:Mm9::chr14:54791784..54791787,+#_11265b55649ac47443b59fe8c6713f8ep@chr14:54791784..54791787, +
1.93e-51FFCP PHASE2:Mm9::chr14:54791784..54791787,+#_11265b55649ac47443b59fe8c6713f8ep@chr14:54791784..54791787, +
3.14e-51FFCP PHASE2:Mm9::chr6:40997465..40997489,+#_48eddf473bd6825794d1a0e1fa59e069p1@ENSMUST00000103263
3.14e-51FFCP PHASE1:Mm9::chr6:40997465..40997489,+#_48eddf473bd6825794d1a0e1fa59e069p1@ENSMUST00000103263
6.04e-51FFCP PHASE2:Mm9::chr9:44793518..44793537,+#_f7f324a9c82132b285ffa061b3b0fae5p@chr9:44793518..44793537, +
6.04e-51FFCP PHASE1:Mm9::chr9:44793518..44793537,+#_f7f324a9c82132b285ffa061b3b0fae5p@chr9:44793518..44793537, +
6.18e-51FFCP PHASE2:Mm9::chr10:28388454..28388458,+#_f5fb80251d800a5272331523f344dc1cp5@Themis
6.18e-51FFCP PHASE1:Mm9::chr10:28388454..28388458,+#_f5fb80251d800a5272331523f344dc1cp5@Themis
7.06e-51FFCP PHASE2:Mm9::chr6:41482920..41482933,+#_e51e030da76eca5ac5cddf9927e8fad8p5@uc009bpa.1
7.06e-51FFCP PHASE1:Mm9::chr6:41482920..41482933,+#_e51e030da76eca5ac5cddf9927e8fad8p5@uc009bpa.1
7.52e-51FFCP PHASE2:Mm9::chr6:41071548..41071565,+#_408c46c282b0d6b80ccce60e98b15b2fp@chr6:41071548..41071565, +
7.52e-51FFCP PHASE1:Mm9::chr6:41071548..41071565,+#_408c46c282b0d6b80ccce60e98b15b2f+, p@chr6:41071548..41071565
1.56e-50FFCP PHASE2:Mm9::chr6:40997323..40997349,+#_21f81d16107905d27074f2b9d50d78ffp2@uc009bnp.1, p2@uc012eki.1
1.56e-50FFCP PHASE1:Mm9::chr6:40997323..40997349,+#_21f81d16107905d27074f2b9d50d78ffp2@uc009bnp.1, p2@uc012eki.1
8.48e-50FFCP PHASE2:Mm9::chr11:52095797..52095809,-#_c44e5d2b51538940984d6d0a25496991p5@Tcf7
8.48e-50FFCP PHASE1:Mm9::chr11:52095797..52095809,-#_c44e5d2b51538940984d6d0a25496991p5@Tcf7
2.7e-49FFCP PHASE1:Mm9::chr14:61328148..61328173,+#_39bf031cdd1fb91c484bcbda7f9b7741p@chr14:61328148..61328173, +
2.7e-49FFCP PHASE2:Mm9::chr14:61328148..61328173,+#_39bf031cdd1fb91c484bcbda7f9b7741p@chr14:61328148..61328173, +
4.69e-49FFCP PHASE1:Mm9::chr6:41483016..41483036,+#_b77f0179e46ff8c5141028037fb4e07ep2@uc009bpa.1
4.69e-49FFCP PHASE2:Mm9::chr6:41483016..41483036,+#_b77f0179e46ff8c5141028037fb4e07ep2@uc009bpa.1
5.29e-49FFCP PHASE1:Mm9::chrX:39855684..39855699,+#_6927434b0908a6ee766905b332821f23p2@Sh2d1a
5.29e-49FFCP PHASE2:Mm9::chrX:39855684..39855699,+#_6927434b0908a6ee766905b332821f23p2@Sh2d1a
6.55e-49FFCP PHASE1:Mm9::chr6:41128981..41128995,+#_9da35900742a31a2bff6a7915b0db52bp1@uc012ekr.1
6.55e-49FFCP PHASE2:Mm9::chr6:41128981..41128995,+#_9da35900742a31a2bff6a7915b0db52bp1@uc012ekr.1
8.0e-49FFCP PHASE2:Mm9::chr6:40841675..40841691,+#_3f53e9f298b45ade4dd161920a375ef1p2@1810009J06Rik
8.0e-49FFCP PHASE1:Mm9::chr6:40841675..40841691,+#_3f53e9f298b45ade4dd161920a375ef1p2@1810009J06Rik
1.12e-48FFCP PHASE2:Mm9::chr6:41066036..41066054,+#_ab5abc746789efa771f6e5a0c263a325p1@uc012ekk.1
1.12e-48FFCP PHASE1:Mm9::chr6:41066036..41066054,+#_ab5abc746789efa771f6e5a0c263a325p1@uc012ekk.1
1.27e-48FFCP PHASE2:Mm9::chr6:41009432..41009454,+#_fdedb34cd5f72a93b7e3e528d454675fp1@ENSMUST00000103265
1.27e-48FFCP PHASE2:Mm9::chr6:41491943..41491953,+#_fdedb34cd5f72a93b7e3e528d454675fp3@uc009bpo.1, p3@uc009bpp.1
1.27e-48FFCP PHASE1:Mm9::chr6:41491943..41491953,+#_fdedb34cd5f72a93b7e3e528d454675fp3@uc009bpo.1, p3@uc009bpp.1
1.27e-48FFCP PHASE1:Mm9::chr6:41009432..41009454,+#_fdedb34cd5f72a93b7e3e528d454675fp1@ENSMUST00000103265
2.25e-48FFCP PHASE2:Mm9::chr7:133512043..133512060,-#_2808e1f26efae3cb6fac2b2103c6088cp@chr7:133512043..133512060, -
2.25e-48FFCP PHASE1:Mm9::chr7:133512043..133512060,-#_2808e1f26efae3cb6fac2b2103c6088cp@chr7:133512043..133512060, -
3.02e-48FFCP PHASE2:Mm9::chr6:41128837..41128859,+#_3758c3433bb095111de1ee0fe9250216p2@Gm5409
3.02e-48FFCP PHASE1:Mm9::chr6:41128837..41128859,+#_3758c3433bb095111de1ee0fe9250216p2@Gm5409
3.92e-48FFCP PHASE2:Mm9::chr16:48772258..48772270,-#_6067b8630a3ad4cfb39050242233c50ap5@Trat1
3.92e-48FFCP PHASE1:Mm9::chr16:48772258..48772270,-#_6067b8630a3ad4cfb39050242233c50ap5@Trat1
4.8e-48FFCP PHASE2:Mm9::chr6:41489240..41489252,+#_c8c097b2e797f16f6cbaf677b32164b3p@chr6:41489240..41489252, +
4.8e-48FFCP PHASE1:Mm9::chr6:41489240..41489252,+#_c8c097b2e797f16f6cbaf677b32164b3p@chr6:41489240..41489252, +
5.53e-48FFCP PHASE1:Mm9::chr16:48772215..48772256,-#_44bc7f8e2ae27f0001fe0f03234d712dp4@Trat1
5.53e-48FFCP PHASE2:Mm9::chr16:48772215..48772256,-#_44bc7f8e2ae27f0001fe0f03234d712dp4@Trat1
7.84e-48FFCP PHASE1:Mm9::chr6:41494376..41494389,-#_f4b3a1cf828658ccc1caf1194e45f4d4p@chr6:41494376..41494389, -
7.84e-48FFCP PHASE2:Mm9::chr6:41494376..41494389,-#_f4b3a1cf828658ccc1caf1194e45f4d4p@chr6:41494376..41494389, -
7.84e-48FFCP PHASE1:Mm9::chr6:41231266..41231303,+#_f4b3a1cf828658ccc1caf1194e45f4d4p1@ENSMUST00000103282
7.84e-48FFCP PHASE2:Mm9::chr6:41231266..41231303,+#_f4b3a1cf828658ccc1caf1194e45f4d4p1@ENSMUST00000103282
8.51e-48FFCP PHASE2:Mm9::chr14:54794540..54794554,+#_eb3e27494570edbf46747b4ebe312150p@chr14:54794540..54794554, +
8.51e-48FFCP PHASE1:Mm9::chr14:54794540..54794554,+#_eb3e27494570edbf46747b4ebe312150p@chr14:54794540..54794554, +
9.15e-48FFCP PHASE2:Mm9::chr14:54496363..54496388,+#_ffb36df6b721a7f1f3f466cd092d750cp@chr14:54496363..54496388, +
9.15e-48FFCP PHASE1:Mm9::chr6:41491801..41491815,-#_ffb36df6b721a7f1f3f466cd092d750cp@chr6:41491801..41491815, -
9.15e-48FFCP PHASE1:Mm9::chr14:54496363..54496388,+#_ffb36df6b721a7f1f3f466cd092d750cp@chr14:54496363..54496388, +
9.15e-48FFCP PHASE2:Mm9::chr6:41491801..41491815,-#_ffb36df6b721a7f1f3f466cd092d750cp@chr6:41491801..41491815, -
1.12e-47FFCP PHASE1:Mm9::chr6:41484314..41484337,+#_5e75c5648f9cfaf8b9bc4e5889eb9652p1@ENSMUST00000103286, p1@uc009bpg.1, p1@uc009bph.1
1.12e-47FFCP PHASE2:Mm9::chr6:41484314..41484337,+#_5e75c5648f9cfaf8b9bc4e5889eb9652p1@ENSMUST00000103286, p1@uc009bpg.1, p1@uc009bph.1
1.14e-47FFCP PHASE2:Mm9::chr7:133512914..133512925,-#_113554b6854a5329924912782b9b109ep7@Lat
1.14e-47FFCP PHASE1:Mm9::chr7:133512914..133512925,-#_113554b6854a5329924912782b9b109ep7@Lat
1.19e-47FFCP PHASE1:Mm9::chr11:53448200..53448205,-#_56144a0bfb92d9e4870804a696dece2dp1@Il13
1.19e-47FFCP PHASE2:Mm9::chr11:53448200..53448205,-#_56144a0bfb92d9e4870804a696dece2dp1@Il13
1.22e-47FFCP PHASE2:Mm9::chr6:41138311..41138333,+#_0bc82459fb262abf2469c77364377734p@chr6:41138311..41138333, +
1.22e-47FFCP PHASE1:Mm9::chr6:41138311..41138333,+#_0bc82459fb262abf2469c77364377734p@chr6:41138311..41138333, +
1.42e-47FFCP PHASE2:Mm9::chr6:41493801..41493826,+#_d99f7af26d9a0c5bf80d4fcf89f18983p1@ENSMUST00000103298, p1@uc009bpy.1
1.42e-47FFCP PHASE1:Mm9::chr6:41493801..41493826,+#_d99f7af26d9a0c5bf80d4fcf89f18983p1@ENSMUST00000103298, p1@uc009bpy.1
1.49e-47FFCP PHASE1:Mm9::chr7:133512935..133512936,-#_0a802cd1389d808af7e5a94a5be398c9p8@Lat
1.49e-47FFCP PHASE1:Mm9::chr4:125978325..125978339,-#_0a802cd1389d808af7e5a94a5be398c9p@chr4:125978325..125978339, -
1.49e-47FFCP PHASE2:Mm9::chr6:41483146..41483158,+#_0a802cd1389d808af7e5a94a5be398c9p6@uc009bpa.1
1.49e-47FFCP PHASE2:Mm9::chr7:133512935..133512936,-#_0a802cd1389d808af7e5a94a5be398c9p8@Lat
1.49e-47FFCP PHASE2:Mm9::chr4:125978325..125978339,-#_0a802cd1389d808af7e5a94a5be398c9p@chr4:125978325..125978339, -
1.49e-47FFCP PHASE1:Mm9::chr6:41483146..41483158,+#_0a802cd1389d808af7e5a94a5be398c9p6@uc009bpa.1
1.52e-47FFCP PHASE2:Mm9::chr6:40996879..40996890,+#_c8fcb6c6b3fa4df9aae3a1972a80d46ep5@uc009bnp.1, p5@uc012eki.1
1.52e-47FFCP PHASE1:Mm9::chr6:40996879..40996890,+#_c8fcb6c6b3fa4df9aae3a1972a80d46ep5@uc009bnp.1, p5@uc012eki.1
1.6e-47FFCP PHASE1:Mm9::chr6:41492643..41492662,+#_1f27b30c87f148f4c3b6a8c143756d72p@chr6:41492643..41492662, +
1.6e-47FFCP PHASE2:Mm9::chr6:41492643..41492662,+#_1f27b30c87f148f4c3b6a8c143756d72p@chr6:41492643..41492662, +
1.9e-47FFCP PHASE2:Mm9::chr6:41492605..41492621,+#_9eed44d9ad8d66b99c33e54bec3d1764p@chr6:41492605..41492621, +
1.9e-47FFCP PHASE1:Mm9::chr6:41492605..41492621,+#_9eed44d9ad8d66b99c33e54bec3d1764p@chr6:41492605..41492621, +
1.49e-46FFCP PHASE1:Mm9::chr19:10904535..10904553,-#_d9ede8f053ec35dbbee23867683ba1cbp2@Cd6
1.49e-46FFCP PHASE2:Mm9::chr19:10904535..10904553,-#_d9ede8f053ec35dbbee23867683ba1cbp2@Cd6
1.59e-46FFCP PHASE2:Mm9::chr11:52075039..52075066,+#_5c17ebc8827aeb3893c6d24411a6eafdp@chr11:52075039..52075066, +
1.59e-46FFCP PHASE1:Mm9::chr11:52075039..52075066,+#_5c17ebc8827aeb3893c6d24411a6eafdp@chr11:52075039..52075066, +