Personal tools

UBERON:0004119

From FANTOM5_SSTAR

Jump to: navigation, search

Name:endoderm-derived structure
Namespace:FANTOM
Definition:"An anatomical structure that develops (entirely or partially) from the endoderm." [UBERON:cjm]
Comments:Grouping term for query purposes
Subset: grouping_class

Ontology association
Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.

link to ontology dataset
data


Parents

is_a:UBERON:0000061(anatomical structure)
develops_from:UBERON:0000925(endoderm)



Children

is a:UBERON:0000006 (islet of Langerhans),UBERON:0000016 (endocrine pancreas),UBERON:0000065 (respiratory tract),UBERON:0000072 (segment of respiratory tract),UBERON:0000077 (mixed endoderm/mesoderm-derived structure),UBERON:0000101 (lobe of lung),UBERON:0000117 (respiratory tube),UBERON:0000170 (pair of lungs),UBERON:0000931 (proctodeum),UBERON:0001171 (portal lobule),UBERON:0001172 (hepatic acinus),UBERON:0001173 (biliary tree),UBERON:0001280 (liver parenchyma),UBERON:0001723 (tongue),UBERON:0001726 (papilla of tongue),UBERON:0001735 (tonsillar ring),UBERON:0001736 (submandibular gland),UBERON:0001737 (larynx),UBERON:0001826 (nasal cavity mucosa),UBERON:0001831 (parotid gland),UBERON:0002046 (thyroid gland),UBERON:0002048 (lung),UBERON:0002107 (liver),UBERON:0002110 (gallbladder),UBERON:0002173 (alveolar duct),UBERON:0002299 (alveolus of lung),UBERON:0002372 (tonsil),UBERON:0002394 (bile duct),UBERON:0002397 (maxilla),UBERON:0002539 (pharyngeal arch),UBERON:0003091 (thyroid primordium),UBERON:0003295 (pharyngeal gland),UBERON:0003323 (mesenchyme of upper jaw),UBERON:0004185 (endodermal part of digestive tract),UBERON:0004647 (liver lobule),UBERON:0004894 (alveolar wall),UBERON:0004913 (hepatopancreatic ampulla),UBERON:0005020 (mucosa of tongue),UBERON:0005911 (endo-epithelium),UBERON:0006524 (alveolar system),UBERON:0006877 (vasculature of liver),UBERON:0007196 (tracheobronchial tree),UBERON:0007303 (pharyngeal vasculature),UBERON:0007329 (pancreatic duct),UBERON:0008814 (pharyngeal arch system),UBERON:0009471 (dorsum of tongue),UBERON:0009494 (pharyngeal arch mesenchymal region),UBERON:0009526 (maxillary process mesenchyme),UBERON:0010046 (entire pharyngeal arch associated mesenchyme),UBERON:0010359 (pharyngeal arch mesenchyme from neural crest)... further results

Ontology Tree: Loaded from BioPortal


FF samples
It includes FANTOM5 samples that overlay the Uberon ontology


Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0004119 (endoderm-derived structure), sorted by p-values
Analyst: Hideya Kawaji

link to source dataset
human : data
mouse : data


P-valueFFCPShort description
5.25e-39FFCP PHASE1:Hg19::chr14:38064429..38064486,-#_0b2c523b9b46cba36157638cff5013d7p1@FOXA1
5.25e-39FFCP PHASE2:Hg19::chr14:38064429..38064486,-#_0b2c523b9b46cba36157638cff5013d7p1@FOXA1
5.41e-39FFCP PHASE1:Hg19::chr16:68269971..68270059,-#_7b334b9795a4e9e86761f07939e121ebp1@ESRP2
5.41e-39FFCP PHASE2:Hg19::chr16:68269971..68270059,-#_7b334b9795a4e9e86761f07939e121ebp1@ESRP2
4.26e-36FFCP PHASE2:Hg19::chr5:134369879..134369898,-#_132df564e20196548c6ce462737490aep2@PITX1
4.26e-36FFCP PHASE1:Hg19::chr5:134369879..134369898,-#_132df564e20196548c6ce462737490aep2@PITX1
7.78e-36FFCP PHASE1:Hg19::chr20:62168672..62168713,-#_fc081973c800e30702f3a7fc84df1e51p1@PTK6
7.78e-36FFCP PHASE2:Hg19::chr20:62168672..62168713,-#_fc081973c800e30702f3a7fc84df1e51p1@PTK6
8.3e-36FFCP PHASE2:Hg19::chr1:209825762..209825779,-#_6ad0c58815c7685106ad88a53b5160b6p1@LAMB3
8.3e-36FFCP PHASE1:Hg19::chr1:209825762..209825779,-#_6ad0c58815c7685106ad88a53b5160b6p1@LAMB3
1.75e-35FFCP PHASE2:Hg19::chr11:394196..394258,+#_c2dddfdaf3ee8998fe39acb06d6d6130p1@PKP3
1.75e-35FFCP PHASE1:Hg19::chr11:394196..394258,+#_c2dddfdaf3ee8998fe39acb06d6d6130p1@PKP3
2.07e-35FFCP PHASE1:Hg19::chr19:42212526..42212575,+#_6398bfde377ca88199870395d51b6012p1@CEACAM5
2.07e-35FFCP PHASE2:Hg19::chr19:42212526..42212575,+#_6398bfde377ca88199870395d51b6012p1@CEACAM5
3.2e-35FFCP PHASE1:Hg19::chr14:65409452..65409479,-#_c6afe7b2b1b55a2949a016684b1b4501p1@GPX2
3.2e-35FFCP PHASE2:Hg19::chr14:65409452..65409479,-#_c6afe7b2b1b55a2949a016684b1b4501p1@GPX2
3.67e-35FFCP PHASE1:Hg19::chr1:26503974..26504025,+#_7b039e6117ceaf6d07451610b6db7952p1@CNKSR1
3.67e-35FFCP PHASE2:Hg19::chr1:26503974..26504025,+#_7b039e6117ceaf6d07451610b6db7952p1@CNKSR1
2.73e-34FFCP PHASE1:Hg19::chr16:68260798..68260800,-#_903eb7f8567c5e222e30a672744d9b5bp@chr16:68260798..68260800, -
2.73e-34FFCP PHASE2:Hg19::chr16:68260798..68260800,-#_903eb7f8567c5e222e30a672744d9b5bp@chr16:68260798..68260800, -
3.29e-34FFCP PHASE1:Hg19::chr18:47721315..47721430,-#_a10bd637bf7e80559038b4af7f513dfdp1@MYO5B
3.29e-34FFCP PHASE2:Hg19::chr18:47721315..47721430,-#_a10bd637bf7e80559038b4af7f513dfdp1@MYO5B
3.5e-34FFCP PHASE2:Hg19::chr17:7164410..7164457,-#_d3873029c6b6c13dbd3d5eb54090a2fdp3@CLDN7
3.5e-34FFCP PHASE1:Hg19::chr17:7164410..7164457,-#_d3873029c6b6c13dbd3d5eb54090a2fdp3@CLDN7
1.73e-33FFCP PHASE1:Hg19::chr11:32851450..32851485,+#_183102819db7e29ba9aec56ba69fa018p1@PRRG4
1.73e-33FFCP PHASE2:Hg19::chr11:32851450..32851485,+#_183102819db7e29ba9aec56ba69fa018p1@PRRG4
3.14e-33FFCP PHASE2:Hg19::chr18:61144160..61144214,+#_f5552a5c0bfe9f02fed9b369bbf50e33p1@SERPINB5
3.14e-33FFCP PHASE1:Hg19::chr18:61144160..61144214,+#_f5552a5c0bfe9f02fed9b369bbf50e33p1@SERPINB5
3.49e-33FFCP PHASE1:Hg19::chr14:65409484..65409495,-#_6492e0c3e40979aa3ff4e773b37f54ffp2@GPX2
3.49e-33FFCP PHASE2:Hg19::chr14:65409484..65409495,-#_6492e0c3e40979aa3ff4e773b37f54ffp2@GPX2
4.5e-33FFCP PHASE1:Hg19::chr8:82644741..82644791,+#_384f5201bb78c8c222d8fc4fbf838f1bp2@CHMP4C
4.5e-33FFCP PHASE2:Hg19::chr8:82644741..82644791,+#_384f5201bb78c8c222d8fc4fbf838f1bp2@CHMP4C
1.62e-32FFCP PHASE1:Hg19::chr17:39942220..39942242,-#_fb6394f7f9207d74ad99676664cfa761p2@JUP
1.62e-32FFCP PHASE2:Hg19::chr17:39942220..39942242,-#_fb6394f7f9207d74ad99676664cfa761p2@JUP
5.24e-32FFCP PHASE2:Hg19::chr1:201979743..201979762,+#_a1092910678549eb2c2cb3d0168b5080p1@ELF3
5.24e-32FFCP PHASE1:Hg19::chr1:201979743..201979762,+#_a1092910678549eb2c2cb3d0168b5080p1@ELF3
1.23e-31FFCP PHASE1:Hg19::chr1:207206020..207206050,-#_fc56184444be029be34ee5a45f39242ep1@C1orf116
1.23e-31FFCP PHASE2:Hg19::chr1:207206020..207206050,-#_fc56184444be029be34ee5a45f39242ep1@C1orf116
1.54e-31FFCP PHASE2:Hg19::chr7:16844611..16844628,-#_5facf988050fef984e8a5cd4e07b14c4p1@AGR2
1.54e-31FFCP PHASE1:Hg19::chr7:16844611..16844628,-#_5facf988050fef984e8a5cd4e07b14c4p1@AGR2
1.75e-31FFCP PHASE2:Hg19::chr1:201368430..201368460,-#_b3bdfc26bdf193eb2b15bf172df62244p1@LAD1
1.75e-31FFCP PHASE1:Hg19::chr1:201368430..201368460,-#_b3bdfc26bdf193eb2b15bf172df62244p1@LAD1
1.77e-31FFCP PHASE2:Hg19::chr19:751122..751139,+#_d4f6eb7085e1695c1177f13f4e54f4abp1@C19orf21
1.77e-31FFCP PHASE1:Hg19::chr19:751122..751139,+#_d4f6eb7085e1695c1177f13f4e54f4abp1@C19orf21
1.83e-31FFCP PHASE1:Hg19::chrX:48916506..48916557,+#_35de7a2ffd6c30fcb552e92dbb981e13p1@CCDC120
1.83e-31FFCP PHASE2:Hg19::chrX:48916506..48916557,+#_35de7a2ffd6c30fcb552e92dbb981e13p1@CCDC120
2.28e-31FFCP PHASE2:Hg19::chr17:38657867..38657882,-#_ca518defe70d3886fb7d3f633ee199cdp1@TNS4
2.28e-31FFCP PHASE1:Hg19::chr17:38657867..38657882,-#_ca518defe70d3886fb7d3f633ee199cdp1@TNS4
2.84e-31FFCP PHASE1:Hg19::chr19:17905938..17905980,+#_b1a2f5fcf3a1197141476e27b23e1386p1@B3GNT3
2.84e-31FFCP PHASE2:Hg19::chr19:17905938..17905980,+#_b1a2f5fcf3a1197141476e27b23e1386p1@B3GNT3
3.29e-31FFCP PHASE1:Hg19::chr11:706219..706260,+#_fb578b59013b0898eedd6e945a0126f6p1@EPS8L2
3.29e-31FFCP PHASE2:Hg19::chr11:706219..706260,+#_fb578b59013b0898eedd6e945a0126f6p1@EPS8L2
4.16e-31FFCP PHASE2:Hg19::chr3:111451321..111451372,+#_8570b2a8ca91947110c2fc485d668675p3@PHLDB2
4.16e-31FFCP PHASE1:Hg19::chr3:111451321..111451372,+#_8570b2a8ca91947110c2fc485d668675p3@PHLDB2
5.94e-31FFCP PHASE1:Hg19::chr16:57653946..57653968,+#_04f3e16dbab0d47a92e7cdf57dbe75d2p4@GPR56
5.94e-31FFCP PHASE2:Hg19::chr16:57653946..57653968,+#_04f3e16dbab0d47a92e7cdf57dbe75d2p4@GPR56
1.21e-30FFCP PHASE1:Hg19::chr5:68711023..68711075,+#_38d748e2d57e20443c545d0d96a4b3e0p2@MARVELD2
1.21e-30FFCP PHASE2:Hg19::chr5:68711023..68711075,+#_38d748e2d57e20443c545d0d96a4b3e0p2@MARVELD2
1.74e-30FFCP PHASE1:Hg19::chr19:751104..751121,+#_bb77e9244c638cf6b32b3c57924e3436p2@C19orf21
1.74e-30FFCP PHASE2:Hg19::chr19:751104..751121,+#_bb77e9244c638cf6b32b3c57924e3436p2@C19orf21
2.5e-30FFCP PHASE1:Hg19::chr8:144815914..144815961,-#_dca14fe092e596ae942a85bd9bcafe11p1@FAM83H
2.5e-30FFCP PHASE2:Hg19::chr8:144815914..144815961,-#_dca14fe092e596ae942a85bd9bcafe11p1@FAM83H
2.54e-30FFCP PHASE2:Hg19::chr19:50084561..50084603,+#_2e7a38ca650ed383c1eaa8e9dad1d8c3p1@PRRG2
2.54e-30FFCP PHASE1:Hg19::chr19:50084561..50084603,+#_2e7a38ca650ed383c1eaa8e9dad1d8c3p1@PRRG2
4.0e-30FFCP PHASE2:Hg19::chr1:27189631..27189648,+#_91be2de124a57c55524267cda2fe898bp1@SFN
4.0e-30FFCP PHASE1:Hg19::chr1:27189631..27189648,+#_91be2de124a57c55524267cda2fe898bp1@SFN
4.35e-30FFCP PHASE2:Hg19::chrX:115567767..115567784,+#_b56bf649069ad5efeb782b373ee03254p1@SLC6A14
4.35e-30FFCP PHASE1:Hg19::chrX:115567767..115567784,+#_b56bf649069ad5efeb782b373ee03254p1@SLC6A14
4.53e-30FFCP PHASE2:Hg19::chr16:31147020..31147058,-#_8a90028110bde8142eb322589dcc958ep1@PRSS8
4.53e-30FFCP PHASE1:Hg19::chr16:31147020..31147058,-#_8a90028110bde8142eb322589dcc958ep1@PRSS8
5.44e-30FFCP PHASE1:Hg19::chr4:15939963..15939978,-#_2c18bf064abce9051fdb530ce6bf9876p1@FGFBP1
5.44e-30FFCP PHASE2:Hg19::chr4:15939963..15939978,-#_2c18bf064abce9051fdb530ce6bf9876p1@FGFBP1
5.82e-30FFCP PHASE1:Hg19::chr1:200864020..200864063,+#_03c2d882da02f5fdb76c31be91d08a86p1@C1orf106
5.82e-30FFCP PHASE2:Hg19::chr1:200864020..200864063,+#_03c2d882da02f5fdb76c31be91d08a86p1@C1orf106
9.01e-30FFCP PHASE1:Hg19::chr9:139379069..139379135,-#_a1c7f7969bbbdc989d5d2d76bd99c9dep@chr9:139379069..139379135, -
9.01e-30FFCP PHASE2:Hg19::chr9:139379069..139379135,-#_a1c7f7969bbbdc989d5d2d76bd99c9de-, p@chr9:139379069..139379135
1.06e-29FFCP PHASE2:Hg19::chr11:72492256..72492358,-#_0b013e229c4fa3bfdddee7f8188867a1p3@STARD10
1.06e-29FFCP PHASE1:Hg19::chr11:72492256..72492358,-#_0b013e229c4fa3bfdddee7f8188867a1p3@STARD10
1.06e-29FFCP PHASE1:Hg19::chr14:65409502..65409511,-#_0b013e229c4fa3bfdddee7f8188867a1p3@GPX2
1.06e-29FFCP PHASE2:Hg19::chr14:65409502..65409511,-#_0b013e229c4fa3bfdddee7f8188867a1p3@GPX2
1.32e-29FFCP PHASE2:Hg19::chr1:201368476..201368498,-#_c873a096687b27d81fa5c679e6adb1e3p4@LAD1
1.32e-29FFCP PHASE1:Hg19::chr1:201368476..201368498,-#_c873a096687b27d81fa5c679e6adb1e3p4@LAD1
2.3e-29FFCP PHASE1:Hg19::chr5:134369905..134369972,-#_f3829b5e103553487197cc78455b1a87p1@PITX1
2.3e-29FFCP PHASE2:Hg19::chr5:134369905..134369972,-#_f3829b5e103553487197cc78455b1a87p1@PITX1
2.62e-29FFCP PHASE2:Hg19::chr1:153588789..153588808,-#_ce3c10fffb3067e4e9178905b91dccfap1@S100A14
2.62e-29FFCP PHASE1:Hg19::chr1:153588789..153588808,-#_ce3c10fffb3067e4e9178905b91dccfap1@S100A14
3.05e-29FFCP PHASE1:Hg19::chr1:207206095..207206121,-#_0a404fabc5769a685ec5c90121f672ddp2@C1orf116
3.05e-29FFCP PHASE2:Hg19::chr1:207206095..207206121,-#_0a404fabc5769a685ec5c90121f672ddp2@C1orf116
3.1e-29FFCP PHASE2:Hg19::chr1:201979703..201979721,+#_f0d9ad1d8defb1669c8c6deeba8f5c14p2@ELF3
3.1e-29FFCP PHASE1:Hg19::chr1:201979703..201979721,+#_f0d9ad1d8defb1669c8c6deeba8f5c14p2@ELF3
3.71e-29FFCP PHASE1:Hg19::chr19:50084621..50084673,+#_5badbb2c064d098eb01a16d3db43c314p2@PRRG2
3.71e-29FFCP PHASE2:Hg19::chr19:50084621..50084673,+#_5badbb2c064d098eb01a16d3db43c314p2@PRRG2
4.26e-29FFCP PHASE1:Mm9::chr13:4190454..4190472,+#_33286bfdca9dbc8145589bf893fe4361p2@Akr1c13
4.26e-29FFCP PHASE2:Mm9::chr13:4190454..4190472,+#_33286bfdca9dbc8145589bf893fe4361p2@Akr1c13
5.11e-29FFCP PHASE1:Hg19::chr11:706174..706213,+#_5c7aecaeb005ff2988fa70bd740ce08ap2@EPS8L2
5.11e-29FFCP PHASE2:Hg19::chr11:706174..706213,+#_5c7aecaeb005ff2988fa70bd740ce08ap2@EPS8L2
5.22e-29FFCP PHASE1:Hg19::chr17:75277512..75277592,+#_64cfe3216d76ea7977148f9bfc6fbc3bp2@SEPT9
5.22e-29FFCP PHASE2:Hg19::chr17:75277512..75277592,+#_64cfe3216d76ea7977148f9bfc6fbc3bp2@SEPT9
5.95e-29FFCP PHASE1:Hg19::chr5:125706998..125707018,+#_602166196f8d8930dbfd5d3a8c6639b2p4@GRAMD3
5.95e-29FFCP PHASE2:Hg19::chr5:125706998..125707018,+#_602166196f8d8930dbfd5d3a8c6639b2p4@GRAMD3