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UBERON:0000064

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Name:organ part
Namespace:FANTOM
Definition:"anatomical structure which has as its direct parts two or more types of tissue and is continuous with one or more anatomical structures likewise constituted by two or more portions of tissues distinct from those of their complement. Examples: osteon, cortical bone, neck of femur, bronchopulmonary segment, left lobe of liver, anterior right side of heart, interventricular branch of left coronary artery, right atrium, mitral valve, head of pancreas[FMA]." [FMA:82472]
Xrefs:
links:

EFO:0000635
FMA:82472

SCTID:91717005
Synonyms: "cardinal organ part" EXACT []
Subset: disjointness_axiom_removed
upper_level

Ontology association

Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.



link to ontology dataset


data

Parents

is_a:UBERON:0010000(multicellular anatomical structure)
part_of:UBERON:0000062(organ)



Children

is a:UBERON:0000006 (islet of Langerhans),UBERON:0000014 (zone of skin),UBERON:0000060 (anatomical wall),UBERON:0000063 (organ segment),UBERON:0000074 (renal glomerulus),UBERON:0000101 (lobe of lung),UBERON:0000200 (gyrus),UBERON:0000353 (parenchyma),UBERON:0000415 (artery wall),UBERON:0000454 (cerebral subcortex),UBERON:0001171 (portal lobule),UBERON:0001178 (visceral peritoneum),UBERON:0001230 (glomerular capsule),UBERON:0001285 (nephron),UBERON:0001560 (neck of organ),UBERON:0001726 (papilla of tongue),UBERON:0001851 (cortex),UBERON:0001869 (cerebral hemisphere),UBERON:0001896 (medulla oblongata),UBERON:0002022 (insula),UBERON:0002073 (hair follicle),UBERON:0002196 (adenohypophysis),UBERON:0002259 (corpora quadrigemina),UBERON:0002499 (cochlear labyrinth),UBERON:0003023 (pontine tegmentum),UBERON:0003215 (alveolus),UBERON:0003891 (stroma),UBERON:0003978 (valve),UBERON:0004151 (cardiac chamber),UBERON:0004647 (liver lobule),UBERON:0004923 (organ component layer),UBERON:0005358 (ventricle of nervous system),UBERON:0005389 (transparent eye structure),UBERON:0005749 (glomerular tuft),UBERON:0005913 (zone of bone organ),UBERON:0006003 (integumentary adnexa),UBERON:0006311 (chamber of eyeball),UBERON:0009034 (stomach region),UBERON:0009471 (dorsum of tongue),UBERON:0009842 (acinus),UBERON:0009911 (lobule),UBERON:0013522 (subdivision of tube),UBERON:0016526 (lobe of cerebral hemisphere)

Ontology Tree: Loaded from BioPortal


FF samples

It includes FANTOM5 samples that overlay the Uberon ontology

Human (Homo sapiens) Mouse (Mus musculus)


Enrichment analysis: top 100 FFCP enriched with this ontology term
TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0000064 (organ part), sorted by p-values
Analyst: Hideya Kawaji



link to source dataset
human : data

mouse : data

No analysis results