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UBERON:0007196

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Name:tracheobronchial tree
Namespace:FANTOM
Definition:"the structure from the trachea, bronchi, and bronchioles that forms the airways that supply air to the lungs. The lining of the tracheobronchial tree consists of ciliated columnar epithelial cells." [Wikipedia:Tracheobronchial_tree]
Xrefs:
links:

FMA:7393

SCTID:361384001
Subset: organ_slim

Ontology association
Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.

link to ontology dataset
data


Parents

is_a:UBERON:0000062(organ),UBERON:0004119(endoderm-derived structure)
part_of:UBERON:0001558(lower respiratory tract)



Children

part of:UBERON:0002185 (bronchus),UBERON:0002186 (bronchiole),CL:0002202 (epithelial cell of tracheobronchial tree),UBERON:0003126 (trachea)

Ontology Tree: Loaded from BioPortal


FF samples
It includes FANTOM5 samples that overlay the Uberon ontology


Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0007196 (tracheobronchial tree), sorted by p-values
Analyst: Hideya Kawaji

link to source dataset
human : data
mouse : data


P-valueFFCPShort description
1.58e-86FFCP PHASE2:Mm9::chr11:4165247..4165267,+#_2ffbc88e47a08d0f02469b52883ae548p@chr11:4165247..4165267, +
1.58e-86FFCP PHASE2:Mm9::chr11:86461733..86461747,-#_2ffbc88e47a08d0f02469b52883ae548p@chr11:86461733..86461747, -
1.58e-86FFCP PHASE2:Mm9::chr5:91199084..91199088,-#_2ffbc88e47a08d0f02469b52883ae548p@chr5:91199084..91199088, -
1.58e-86FFCP PHASE1:Mm9::chr11:96608719..96608730,-#_2ffbc88e47a08d0f02469b52883ae548p1@ENSMUST00000170876, p1@uc011ydj.1
1.58e-86FFCP PHASE1:Mm9::chr2:60538178..60538182,-#_2ffbc88e47a08d0f02469b52883ae548p@chr2:60538178..60538182, -
1.58e-86FFCP PHASE2:Mm9::chr5:135422125..135422141,-#_2ffbc88e47a08d0f02469b52883ae548-, p@chr5:135422125..135422141
1.58e-86FFCP PHASE1:Mm9::chr11:4165247..4165267,+#_2ffbc88e47a08d0f02469b52883ae548p@chr11:4165247..4165267, +
1.58e-86FFCP PHASE1:Mm9::chr4:88696177..88696184,+#_2ffbc88e47a08d0f02469b52883ae548p2@Gm12603
1.58e-86FFCP PHASE2:Mm9::chr12:17549752..17549763,+#_2ffbc88e47a08d0f02469b52883ae548p@chr12:17549752..17549763, +
1.58e-86FFCP PHASE1:Mm9::chr12:17549752..17549763,+#_2ffbc88e47a08d0f02469b52883ae548p@chr12:17549752..17549763, +
1.58e-86FFCP PHASE1:Mm9::chr3:89487103..89487111,-#_2ffbc88e47a08d0f02469b52883ae548-, p@chr3:89487103..89487111
1.58e-86FFCP PHASE2:Mm9::chr13:115644652..115644657,-#_2ffbc88e47a08d0f02469b52883ae548p@chr13:115644652..115644657, -
1.58e-86FFCP PHASE1:Mm9::chr2:164389604..164389615,+#_2ffbc88e47a08d0f02469b52883ae548p@chr2:164389604..164389615, +
1.58e-86FFCP PHASE1:Mm9::chr6:147338308..147338339,-#_2ffbc88e47a08d0f02469b52883ae548p@chr6:147338308..147338339, -
1.58e-86FFCP PHASE2:Mm9::chr1:108303887..108303893,+#_2ffbc88e47a08d0f02469b52883ae548p@chr1:108303887..108303893, +
1.58e-86FFCP PHASE2:Mm9::chr6:147338308..147338339,-#_2ffbc88e47a08d0f02469b52883ae548p@chr6:147338308..147338339, -
1.58e-86FFCP PHASE2:Mm9::chr2:60538178..60538182,-#_2ffbc88e47a08d0f02469b52883ae548p@chr2:60538178..60538182, -
1.58e-86FFCP PHASE1:Mm9::chr9:110941233..110941240,+#_2ffbc88e47a08d0f02469b52883ae548p@chr9:110941233..110941240, +
1.58e-86FFCP PHASE1:Mm9::chr16:32641594..32641601,+#_2ffbc88e47a08d0f02469b52883ae548p@chr16:32641594..32641601, +
1.58e-86FFCP PHASE1:Mm9::chr2:164393992..164394012,-#_2ffbc88e47a08d0f02469b52883ae548p@chr2:164393992..164394012, -
1.58e-86FFCP PHASE2:Mm9::chr4:88696144..88696152,+#_2ffbc88e47a08d0f02469b52883ae548p3@Gm12603
1.58e-86FFCP PHASE1:Mm9::chr13:115644652..115644657,-#_2ffbc88e47a08d0f02469b52883ae548p@chr13:115644652..115644657, -
1.58e-86FFCP PHASE1:Mm9::chr5:135422125..135422141,-#_2ffbc88e47a08d0f02469b52883ae548p@chr5:135422125..135422141, -
1.58e-86FFCP PHASE1:Mm9::chr4:88563185..88563192,-#_2ffbc88e47a08d0f02469b52883ae548p@chr4:88563185..88563192, -
1.58e-86FFCP PHASE2:Mm9::chr2:164389604..164389615,+#_2ffbc88e47a08d0f02469b52883ae548p@chr2:164389604..164389615, +
1.58e-86FFCP PHASE2:Mm9::chr6:147205603..147205610,+#_2ffbc88e47a08d0f02469b52883ae548p@chr6:147205603..147205610, +
1.58e-86FFCP PHASE1:Mm9::chr15:101258041..101258052,+#_2ffbc88e47a08d0f02469b52883ae548p@chr15:101258041..101258052, +
1.58e-86FFCP PHASE2:Mm9::chr5:135420996..135421000,+#_2ffbc88e47a08d0f02469b52883ae548p@chr5:135420996..135421000, +
1.58e-86FFCP PHASE1:Mm9::chr5:135420996..135421000,+#_2ffbc88e47a08d0f02469b52883ae548p@chr5:135420996..135421000, +
1.58e-86FFCP PHASE1:Mm9::chr1:151954385..151954387,+#_2ffbc88e47a08d0f02469b52883ae548p@chr1:151954385..151954387, +
1.58e-86FFCP PHASE2:Mm9::chr4:88696177..88696184,+#_2ffbc88e47a08d0f02469b52883ae548p2@Gm12603
1.58e-86FFCP PHASE1:Mm9::chr1:108303887..108303893,+#_2ffbc88e47a08d0f02469b52883ae548p@chr1:108303887..108303893, +
1.58e-86FFCP PHASE2:Mm9::chr13:72401408..72401416,-#_2ffbc88e47a08d0f02469b52883ae548p@chr13:72401408..72401416, -
1.58e-86FFCP PHASE1:Mm9::chr5:91198876..91198885,+#_2ffbc88e47a08d0f02469b52883ae548p@chr5:91198876..91198885, +
1.58e-86FFCP PHASE1:Mm9::chr6:147205603..147205610,+#_2ffbc88e47a08d0f02469b52883ae548p@chr6:147205603..147205610, +
1.58e-86FFCP PHASE2:Mm9::chr11:96608719..96608730,-#_2ffbc88e47a08d0f02469b52883ae548p1@ENSMUST00000170876, p1@uc011ydj.1
1.58e-86FFCP PHASE2:Mm9::chr9:110941233..110941240,+#_2ffbc88e47a08d0f02469b52883ae548p@chr9:110941233..110941240, +
1.58e-86FFCP PHASE2:Mm9::chr16:32641594..32641601,+#_2ffbc88e47a08d0f02469b52883ae548p@chr16:32641594..32641601, +
1.58e-86FFCP PHASE1:Mm9::chr9:110941246..110941254,+#_2ffbc88e47a08d0f02469b52883ae548p@chr9:110941246..110941254, +
1.58e-86FFCP PHASE2:Mm9::chr6:147205677..147205683,+#_2ffbc88e47a08d0f02469b52883ae548p@chr6:147205677..147205683, +
1.58e-86FFCP PHASE2:Mm9::chr15:101258041..101258052,+#_2ffbc88e47a08d0f02469b52883ae548+, p@chr15:101258041..101258052
1.58e-86FFCP PHASE1:Mm9::chr11:100006864..100006873,+#_2ffbc88e47a08d0f02469b52883ae548p@chr11:100006864..100006873, +
1.58e-86FFCP PHASE2:Mm9::chr3:89487103..89487111,-#_2ffbc88e47a08d0f02469b52883ae548p@chr3:89487103..89487111, -
1.58e-86FFCP PHASE2:Mm9::chr11:100006864..100006873,+#_2ffbc88e47a08d0f02469b52883ae548p@chr11:100006864..100006873, +
1.58e-86FFCP PHASE2:Mm9::chr17:25885558..25885567,+#_2ffbc88e47a08d0f02469b52883ae548p@chr17:25885558..25885567, +
1.58e-86FFCP PHASE1:Mm9::chr13:72401408..72401416,-#_2ffbc88e47a08d0f02469b52883ae548p@chr13:72401408..72401416, -
1.58e-86FFCP PHASE2:Mm9::chr1:151954385..151954387,+#_2ffbc88e47a08d0f02469b52883ae548p@chr1:151954385..151954387, +
1.58e-86FFCP PHASE1:Mm9::chr17:25885558..25885567,+#_2ffbc88e47a08d0f02469b52883ae548p@chr17:25885558..25885567, +
1.58e-86FFCP PHASE2:Mm9::chr5:91198876..91198885,+#_2ffbc88e47a08d0f02469b52883ae548p@chr5:91198876..91198885, +
1.58e-86FFCP PHASE2:Mm9::chr4:88563185..88563192,-#_2ffbc88e47a08d0f02469b52883ae548p@chr4:88563185..88563192, -
1.58e-86FFCP PHASE2:Mm9::chr13:115722413..115722430,+#_2ffbc88e47a08d0f02469b52883ae548p@chr13:115722413..115722430, +
1.58e-86FFCP PHASE1:Mm9::chr11:86461733..86461747,-#_2ffbc88e47a08d0f02469b52883ae548p@chr11:86461733..86461747, -
1.58e-86FFCP PHASE1:Mm9::chr5:91199084..91199088,-#_2ffbc88e47a08d0f02469b52883ae548-, p@chr5:91199084..91199088
1.58e-86FFCP PHASE1:Mm9::chr6:147205677..147205683,+#_2ffbc88e47a08d0f02469b52883ae548p@chr6:147205677..147205683, +
1.58e-86FFCP PHASE1:Mm9::chr13:115722413..115722430,+#_2ffbc88e47a08d0f02469b52883ae548p@chr13:115722413..115722430, +
1.58e-86FFCP PHASE1:Mm9::chr4:88696144..88696152,+#_2ffbc88e47a08d0f02469b52883ae548p3@Gm12603
1.58e-86FFCP PHASE2:Mm9::chr9:110941246..110941254,+#_2ffbc88e47a08d0f02469b52883ae548p@chr9:110941246..110941254, +
1.58e-86FFCP PHASE2:Mm9::chr2:164393992..164394012,-#_2ffbc88e47a08d0f02469b52883ae548-, p@chr2:164393992..164394012
1.33e-65FFCP PHASE1:Mm9::chr14:34905716..34905718,+#_0f50f82e1aa339921e9a97292328a978p@chr14:34905716..34905718, +
1.33e-65FFCP PHASE1:Mm9::chr19:47939269..47939279,-#_0f50f82e1aa339921e9a97292328a978p@chr19:47939269..47939279, -
1.33e-65FFCP PHASE2:Mm9::chr19:47932377..47932386,-#_0f50f82e1aa339921e9a97292328a978-, p@chr19:47932377..47932386
1.33e-65FFCP PHASE1:Mm9::chr2:144564146..144564166,+#_0f50f82e1aa339921e9a97292328a978p3@Dtd1
1.33e-65FFCP PHASE2:Mm9::chr14:31386795..31386797,-#_0f50f82e1aa339921e9a97292328a978p@chr14:31386795..31386797, -
1.33e-65FFCP PHASE2:Mm9::chr11:29642912..29642916,-#_0f50f82e1aa339921e9a97292328a978p@chr11:29642912..29642916, -
1.33e-65FFCP PHASE1:Mm9::chr11:100002128..100002131,+#_0f50f82e1aa339921e9a97292328a978p@chr11:100002128..100002131, +
1.33e-65FFCP PHASE1:Mm9::chr11:29642912..29642916,-#_0f50f82e1aa339921e9a97292328a978p@chr11:29642912..29642916, -
1.33e-65FFCP PHASE1:Mm9::chr19:47932377..47932386,-#_0f50f82e1aa339921e9a97292328a978p@chr19:47932377..47932386, -
1.33e-65FFCP PHASE2:Mm9::chrX:20383628..20383635,+#_0f50f82e1aa339921e9a97292328a978p@chrX:20383628..20383635, +
1.33e-65FFCP PHASE2:Mm9::chr11:100002128..100002131,+#_0f50f82e1aa339921e9a97292328a978p@chr11:100002128..100002131, +
1.33e-65FFCP PHASE2:Mm9::chr3:121437538..121437546,+#_0f50f82e1aa339921e9a97292328a978p@chr3:121437538..121437546, +
1.33e-65FFCP PHASE1:Mm9::chr14:31386795..31386797,-#_0f50f82e1aa339921e9a97292328a978p@chr14:31386795..31386797, -
1.33e-65FFCP PHASE1:Mm9::chr3:90392458..90392472,+#_0f50f82e1aa339921e9a97292328a978p@chr3:90392458..90392472, +
1.33e-65FFCP PHASE2:Mm9::chr2:144564146..144564166,+#_0f50f82e1aa339921e9a97292328a978p3@Dtd1
1.33e-65FFCP PHASE2:Mm9::chr14:34905716..34905718,+#_0f50f82e1aa339921e9a97292328a978p@chr14:34905716..34905718, +
1.33e-65FFCP PHASE1:Mm9::chr3:121437538..121437546,+#_0f50f82e1aa339921e9a97292328a978p@chr3:121437538..121437546, +
1.33e-65FFCP PHASE2:Mm9::chr3:121437587..121437593,+#_0f50f82e1aa339921e9a97292328a978p@chr3:121437587..121437593, +
1.33e-65FFCP PHASE2:Mm9::chr19:47939269..47939279,-#_0f50f82e1aa339921e9a97292328a978-, p@chr19:47939269..47939279
1.33e-65FFCP PHASE1:Mm9::chr6:147212620..147212625,+#_0f50f82e1aa339921e9a97292328a978p@chr6:147212620..147212625, +
1.33e-65FFCP PHASE2:Mm9::chr6:147212620..147212625,+#_0f50f82e1aa339921e9a97292328a978+, p@chr6:147212620..147212625
1.33e-65FFCP PHASE1:Mm9::chr3:121437587..121437593,+#_0f50f82e1aa339921e9a97292328a978p@chr3:121437587..121437593, +
1.33e-65FFCP PHASE2:Mm9::chr11:4164303..4164316,+#_0f50f82e1aa339921e9a97292328a978p@chr11:4164303..4164316, +
1.33e-65FFCP PHASE1:Mm9::chrX:20383628..20383635,+#_0f50f82e1aa339921e9a97292328a978p@chrX:20383628..20383635, +
1.33e-65FFCP PHASE2:Mm9::chr3:90392458..90392472,+#_0f50f82e1aa339921e9a97292328a978p@chr3:90392458..90392472, +
1.33e-65FFCP PHASE1:Mm9::chr11:4164303..4164316,+#_0f50f82e1aa339921e9a97292328a978p@chr11:4164303..4164316, +
6.04e-65FFCP PHASE2:Mm9::chr17:25888467..25888513,-#_d7fe8415242d053b7fe7be021c7ec8fbp@chr17:25888467..25888513, -
6.04e-65FFCP PHASE1:Mm9::chr17:25888467..25888513,-#_d7fe8415242d053b7fe7be021c7ec8fbp@chr17:25888467..25888513, -
6.04e-65FFCP PHASE2:Mm9::chr19:47928736..47928764,+#_d7fe8415242d053b7fe7be021c7ec8fbp@chr19:47928736..47928764, +
6.04e-65FFCP PHASE2:Mm9::chr1:90456476..90456498,+#_d7fe8415242d053b7fe7be021c7ec8fbp@chr1:90456476..90456498, +
6.04e-65FFCP PHASE1:Mm9::chr1:90456476..90456498,+#_d7fe8415242d053b7fe7be021c7ec8fbp@chr1:90456476..90456498, +
6.04e-65FFCP PHASE1:Mm9::chr15:38385124..38385138,+#_d7fe8415242d053b7fe7be021c7ec8fbp@chr15:38385124..38385138, +
6.04e-65FFCP PHASE1:Mm9::chr19:47928736..47928764,+#_d7fe8415242d053b7fe7be021c7ec8fbp@chr19:47928736..47928764, +
6.04e-65FFCP PHASE2:Mm9::chr15:38385124..38385138,+#_d7fe8415242d053b7fe7be021c7ec8fbp@chr15:38385124..38385138, +
4.9e-53FFCP PHASE2:Mm9::chr6:147212455..147212462,-#_4ac77f64f8e4c2a62220e624519daee6p6@Pthlh
4.9e-53FFCP PHASE2:Mm9::chr5:92644371..92644380,-#_4ac77f64f8e4c2a62220e624519daee6p1@U90926
4.9e-53FFCP PHASE1:Mm9::chr5:103804464..103804467,+#_4ac77f64f8e4c2a62220e624519daee6p@chr5:103804464..103804467, +
4.9e-53FFCP PHASE1:Mm9::chr6:147212455..147212462,-#_4ac77f64f8e4c2a62220e624519daee6p6@Pthlh
4.9e-53FFCP PHASE2:Mm9::chr11:96608968..96608974,-#_4ac77f64f8e4c2a62220e624519daee6p2@ENSMUST00000166907
4.9e-53FFCP PHASE1:Mm9::chr12:8799233..8799252,+#_4ac77f64f8e4c2a62220e624519daee6p@chr12:8799233..8799252, +
4.9e-53FFCP PHASE2:Mm9::chr1:152012112..152012121,-#_4ac77f64f8e4c2a62220e624519daee6p6@ENSMUST00000163840
4.9e-53FFCP PHASE1:Mm9::chr1:152012112..152012121,-#_4ac77f64f8e4c2a62220e624519daee6p6@ENSMUST00000163840