FFCP PHASE1:Hg19::chr11:1977251..1977266,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:1977251..1977266,+ | |||
|coexpression_cluster_id=C3130 | |||
|description=CAGE_peak_at_chr11:1977251..1977266,+ | |description=CAGE_peak_at_chr11:1977251..1977266,+ | ||
|id=chr11:1977251..1977266,+ | |id=chr11:1977251..1977266,+ | ||
|ontology_enrichment_celltype=CL:0000349!1.20e-24!3;CL:0002577!1.20e-24!3;CL:0002536!2.77e-16!2;CL:0002537!3.58e-15!5;CL:0002541!2.64e-11!3 | |ontology_enrichment_celltype=CL:0000349!1.20e-24!3;CL:0002577!1.20e-24!3;CL:0002536!2.77e-16!2;CL:0002537!3.58e-15!5;CL:0002541!2.64e-11!3 | ||
|ontology_enrichment_celltype_v019=CL:0000349;2.91e-44;19!CL:0002577;8.13e-41;3!CL:0002537;5.13e-25;5!CL:0002536;8.32e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,3.08e-44,19;CL:0002577,8.70e-41,3;CL:0002537,4.93e-25,5;CL:0002536,8.60e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0000358;2.57e-14;1!UBERON:0007297;9.19e-08;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!1.08e-65!14;UBERON:0000158!1.08e-65!14;UBERON:0000478!9.15e-45!24;UBERON:0003124!1.18e-39!7;UBERON:0001987!1.23e-31!4;UBERON:0004340!1.23e-31!4;UBERON:0000305!4.22e-28!7;UBERON:0004871!1.40e-24!8;UBERON:0004923!1.48e-17!57;UBERON:0000476!2.64e-11!3;UBERON:0000920!2.64e-11!3;UBERON:0002426!3.31e-09!1;UBERON:0003831!3.31e-09!1;UBERON:0003898!3.31e-09!1;UBERON:0004830!3.31e-09!1;UBERON:0001774!3.31e-09!1;UBERON:0003830!3.31e-09!1;UBERON:0005175!3.31e-09!1;UBERON:0003897!3.31e-09!1;UBERON:0001103!3.31e-09!1;UBERON:0010084!3.31e-09!1;UBERON:0001301!4.91e-09!1;UBERON:0007029!7.85e-09!1;UBERON:0004175!1.15e-07!25;UBERON:0000013!6.76e-07!5;UBERON:0002410!6.76e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0000478;5.60e-44;24!UBERON:0005631;2.04e-33;10!UBERON:0000158;2.04e-33;10!UBERON:0000305;7.16e-31;7!UBERON:0001987;8.14e-31;4!UBERON:0002426;1.50e-14;1!UBERON:0003831;1.50e-14;1!UBERON:0003898;1.50e-14;1!UBERON:0004830;1.50e-14;1!UBERON:0003830;1.50e-14;1!UBERON:0005175;1.50e-14;1!UBERON:0001774;1.50e-14;1!UBERON:0001103;1.50e-14;1!UBERON:0001301;3.15e-14;1!UBERON:0003127;6.36e-08;2!UBERON:0005090;6.36e-08;2!UBERON:0001630;6.36e-08;2!UBERON:0000341;7.27e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,3.26e-60,14;UBERON:0000158,3.26e-60,14;UBERON:0000478,5.74e-44,24;UBERON:0003124,6.63e-31,7;UBERON:0000305,7.16e-31,7;UBERON:0001987,8.56e-31,4;UBERON:0004340,8.56e-31,4;UBERON:0004871,4.56e-27,8;UBERON:0002426,1.61e-14,1;UBERON:0003831,1.61e-14,1;UBERON:0003898,1.61e-14,1;UBERON:0004830,1.61e-14,1;UBERON:0003830,1.61e-14,1;UBERON:0005175,1.61e-14,1;UBERON:0001774,1.61e-14,1;UBERON:0001103,1.61e-14,1;UBERON:0010084,1.61e-14,1;UBERON:0001301,3.15e-14,1;UBERON:0004923,2.95e-12,66;UBERON:0004175,8.60e-09,25;UBERON:0003127,6.15e-08,2;UBERON:0005090,6.58e-08,2;UBERON:0001630,6.58e-08,2;UBERON:0000341,7.03e-08,2 | |||
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|short_description=p@chr11:1977251..1977266,+ | |short_description=p@chr11:1977251..1977266,+ | ||
}} | }} |
Latest revision as of 20:51, 23 July 2015
Short description: | p@chr11:1977251..1977266, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:1977251..1977266, + |
Coexpression cluster: | C3130_amniotic_skeletal_Placental_diaphragm_chorionic_throat_trachea |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 3.08e-44 | 19 |
placental epithelial cell | 8.70e-41 | 3 |
amnion mesenchymal stem cell | 4.93e-25 | 5 |
amniotic epithelial cell | 8.60e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 3.26e-60 | 14 |
membranous layer | 3.26e-60 | 14 |
extraembryonic structure | 5.74e-44 | 24 |
chorion | 6.63e-31 | 7 |
amnion | 7.16e-31 | 7 |
placenta | 8.56e-31 | 4 |
allantois | 8.56e-31 | 4 |
somatic layer of lateral plate mesoderm | 4.56e-27 | 8 |
chest muscle | 1.61e-14 | 1 |
respiratory system muscle | 1.61e-14 | 1 |
skeletal muscle of trunk | 1.61e-14 | 1 |
respiratory system skeletal muscle | 1.61e-14 | 1 |
thoracic segment muscle | 1.61e-14 | 1 |
chest organ | 1.61e-14 | 1 |
muscle of trunk | 1.61e-14 | 1 |
diaphragm | 1.61e-14 | 1 |
future diaphragm | 1.61e-14 | 1 |
epididymis | 3.15e-14 | 1 |
organ component layer | 2.95e-12 | 66 |
internal genitalia | 8.60e-09 | 25 |
open tracheal system trachea | 6.15e-08 | 2 |
muscle structure | 6.58e-08 | 2 |
muscle organ | 6.58e-08 | 2 |
throat | 7.03e-08 | 2 |