FFCP PHASE1:Hg19::chr19:37264112..37264129,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=55bp_to_uc002oes.1_5end | |||
|cluster_id=chr19:37264112..37264129,+ | |||
|coexpression_cluster_id=C277 | |||
|description=CAGE_peak_2_at_uc002oes.1_5end | |||
|id=chr19:37264112..37264129,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000511;1.10e-13;1!CL:0002625;1.10e-13;1!CL:0000216;1.10e-13;1!CL:0000540;1.99e-09;6!CL:0000404;1.99e-09;6!CL:0002593;1.75e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000511,6.65e-14,1;CL:0002625,6.65e-14,1;CL:0000216,6.65e-14,1;CL:0000540,1.91e-09,6;CL:0000031,1.91e-09,6;CL:0000404,1.91e-09,6;CL:0002593,1.99e-07,2;CL:0000047,2.69e-07,8 | |||
|ontology_enrichment_development_v019=CL:0000031;1.99e-09;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.80e-19!94;UBERON:0001016!1.80e-19!94;UBERON:0002346!6.54e-19!90;UBERON:0003075!1.31e-18!86;UBERON:0007284!1.31e-18!86;UBERON:0005743!4.64e-18!86;UBERON:0000924!6.18e-17!173;UBERON:0006601!6.18e-17!173;UBERON:0004121!1.69e-16!169;UBERON:0001017!2.08e-16!82;UBERON:0001049!6.39e-16!57;UBERON:0005068!6.39e-16!57;UBERON:0006241!6.39e-16!57;UBERON:0007135!6.39e-16!57;UBERON:0002616!4.74e-15!59;UBERON:0007023!1.38e-14!115;UBERON:0000955!2.67e-14!69;UBERON:0006238!2.67e-14!69;UBERON:0003056!1.27e-13!61;UBERON:0002780!1.35e-12!41;UBERON:0001890!1.35e-12!41;UBERON:0006240!1.35e-12!41;UBERON:0003080!4.16e-12!42;UBERON:0000033!7.83e-12!123;UBERON:0000153!4.32e-11!129;UBERON:0007811!4.32e-11!129;UBERON:0001893!9.99e-11!34;UBERON:0002791!5.32e-10!33;UBERON:0001869!2.35e-09!32;UBERON:0002020!2.58e-09!34;UBERON:0003528!2.58e-09!34;UBERON:0002619!8.25e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0001136;1.10e-13;1!UBERON:0001343;1.10e-13;1!UBERON:0004910;1.10e-13;1!UBERON:0004813;1.10e-13;1!UBERON:0003296;2.66e-13;4!UBERON:0010133;2.66e-13;4!UBERON:0001894;5.47e-08;7!UBERON:0001905;1.75e-07;2!UBERON:0000007;1.75e-07;2!UBERON:0002757;1.75e-07;2!UBERON:0010134;1.75e-07;2!UBERON:0004909;1.75e-07;2!UBERON:0005408;1.75e-07;2!UBERON:0002456;1.75e-07;2!UBERON:0001899;1.75e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001136,6.65e-14,1;UBERON:0001343,6.65e-14,1;UBERON:0004910,6.65e-14,1;UBERON:0005154,6.65e-14,1;UBERON:0005295,6.65e-14,1;UBERON:0004813,6.65e-14,1;UBERON:0005297,6.65e-14,1;UBERON:0005294,6.65e-14,1;UBERON:0010141,6.65e-14,1;UBERON:0005891,6.65e-14,1;UBERON:0003296,2.51e-13,4;UBERON:0010133,2.51e-13,4;UBERON:0001894,5.28e-08,7;UBERON:0006222,5.28e-08,7;UBERON:0000007,1.28e-07,2;UBERON:0004909,1.36e-07,2;UBERON:0002456,1.99e-07,2;UBERON:0001905,2.25e-07,2;UBERON:0002757,2.25e-07,2;UBERON:0010134,2.25e-07,2;UBERON:0005408,2.25e-07,2;UBERON:0001899,2.25e-07,2 | |||
|phase1_expression=0,0,0.281908808191942,1.0007329835313,0.446961094427288,0.872338524100369,0,0,0,0,0,0,0.527533956456907,0,0,0.672325146451775,0,0,0,0.61560529038394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0774672005803016,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0.526768169550154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0.144846518960824,0,0,0.0945348171640679,0.665188192387692,0.087834785693126,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0.12663051166458,0.132409180813219,0,0,0,0,0.24666754841716,0,0,0,0,0.576175924479999,0,0,0,0.149448680551801,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0.340296549480063,0,0,0,0,0.103052529238439,0,0.18611685633159,0,0,0,0,0,0,0.10075209822764,0,0,0.272746120590835,0,0.121973706129595,1.06023814657188,0.232387885739037,0.310983165046111,0.504641701751257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0.579652024875384,0.352226082707465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288239906833923,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0,0,0.257207374262142,0,0,0.142977993658148,0.542621605391443,0,0.325736184293735,0,0,0.602878754119172,0.871533458600294,0.099972991182057,0,0,0,0.239624855491583,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0.160853921143607,0,0,0,0,0,0.232420756919918,0,0,0,0,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0.219259876645935,0,0,0.328014645699706,0.650756789328606,0,0.0915694648183434,0.082509499920588,0,0,1.6068392984416,0,0,0,0,0,0,0.170453254832202,0,0,0,0,0,0,0,0,0,0,0,0,0.286249773483982,0,0,0.190630193923825,0,0,0,0,0,0,0,0.202182481573316,0,0,0.48763373908959,0,1.05650146756755,0,0,0,0,0,0,0,0,0.405820753925408,0,0,0,0,0,0,0,0.329294892959902,0,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0.423347165447766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,1.4098700508785,0,0,0,0,0.852408440419239,0.23874448473769,0.296964680832639,0,0,0.422008249231538,0.111308705022906,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0.185536196323703,0,0,0,0,0,0,0,1.03423011972439,0.291604613383254,0.520874984799877,0.885741385813839,0.60298219312704,0,0.995213339381022,1.18219047581419,0.219385397153973,0,0,0.153900517007594,0.113942055847001,0,0,0,0,0.0915975934018623,0,0,0,0.332423363800313,0,0,0,0,0.317873157960757,0,0,0,0,0.995261931078505,0.0884575645033392,0,0,0,0,0.404406797884062,0,0,0,0,0,0,0,0,0.126373159256976,3.15679180770434,0.414752765588989,0,0,0,0,2.27687636823834,0,0,0,0,0,0.859930162358083,0,0,0,0,0.176512253383001,0.677942222341597,0,0,0.189932387867636,0.977756913674015,0.64127056201227,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0.288950589901519,0,0.684526894459965,0,0.429765441419957,0,0.279282401272254,0,0,0.399358000997982,0,0.223171457441873,0,0,0,0,0,0,0,0,0,0.272406812223151,0,2.47570985875021,2.9080823662043,0,0,0.425246896606173,0,0.157611414598396,0.157363764404994,0.950403028674658,0,0,0,0,0,0,0,0,0,0.164185041498678,0,0,0,0,0.129282956361551,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0.366078794705889,0.250381861413,0,0.443716206147409,0.620964029413834,0.138348634936231,0.124980407962107,0,0.285465333544967,0.235265819698172,0.468334905806882,0.434763085832475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300515217994437,0.380805212168795,0,0,0,0,0,0,0,0,0,0.57785949122191,0,0,0.226705925512272,0,8.3210479532199,0,0,0,0,0,0,0,0,0,0.414775308455192,0,0,0,0,0,0,0,0,0.172214979660816,0,0,0,0,0.127894371303652,0.215649622793364,0,0.655257829152084,0.169732529954025,0.212574920101683,0,0,0,0.0788617450012534,0,0,0.3062454773532,0.256916900385838,0,0.798169295285756,0.205116364240755,0,0.484100767249525,0.161475645631851,0,0,0,0,0,0,0,0.198916222116275,0.0752103283492573,0.20170506870352,0,0,0,0,0.405225507710368,0,0.206686796501184,0.317079050969534,0,0,0,0,0,0.535701835878287,1.00885116665647,0,1.82129753081038,0.0887023701626388,0,0,0.40781839786099,0.526182188502793,0,0,0.156986185701028,0.314231179832004,0,0,0,0,0.285906176706625,0,0.116241425368125,0,0,0,0,0,0,0.118332000730565,0.340853619036631,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0.301925687133347,0,0.218559560503957,0,0,0,0.196308467114945,0,0.4226557275834,0,0,0.128915775947154,0,0,0,0,0,0,0.286679166302903,0,0.679914901909147,0,0.5290268405154,0,0,0,0,1.20192129160065,0.633492505057185,0.203977659483963,0,0,0.250707539292375,0.303114792872958,0.267964130156178,0,0.517164979309476,0,0,0,0.0620747142958579,0,0.25458863311266,0,0,0.684466602170562,0.0673520530145875,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p2@uc002oes.1 | |||
}} |
Latest revision as of 07:07, 26 July 2015
Short description: | p2@uc002oes.1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_uc002oes.1_5end |
Coexpression cluster: | C277_mesothelioma_epithelioid_thyroid_extraskeletal_alveolar_glioblastoma_adenocarcinoma |
Association with transcript: | 55bp_to_uc002oes.1_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
androgen binding protein secreting cell | 6.65e-14 | 1 |
seminiferous tubule epithelial cell | 6.65e-14 | 1 |
Sertoli cell | 6.65e-14 | 1 |
neuron | 1.91e-09 | 6 |
neuroblast | 1.91e-09 | 6 |
electrically signaling cell | 1.91e-09 | 6 |
smooth muscle cell of the internal thoracic artery | 1.99e-07 | 2 |
neuronal stem cell | 2.69e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
mesothelium | 6.65e-14 | 1 |
seminiferous tubule of testis | 6.65e-14 | 1 |
epithelium of male gonad | 6.65e-14 | 1 |
epithelial cord | 6.65e-14 | 1 |
sex cord | 6.65e-14 | 1 |
seminiferous tubule epithelium | 6.65e-14 | 1 |
testis sex cord | 6.65e-14 | 1 |
genital ridge | 6.65e-14 | 1 |
primitive sex cord of indifferent gonad | 6.65e-14 | 1 |
coelomic epithelium | 6.65e-14 | 1 |
gland of diencephalon | 2.51e-13 | 4 |
neuroendocrine gland | 2.51e-13 | 4 |
diencephalon | 5.28e-08 | 7 |
future diencephalon | 5.28e-08 | 7 |
pituitary gland | 1.28e-07 | 2 |
epithelium of gonad | 1.36e-07 | 2 |
internal thoracic artery | 1.99e-07 | 2 |
pineal body | 2.25e-07 | 2 |
regional part of epithalamus | 2.25e-07 | 2 |
secretory circumventricular organ | 2.25e-07 | 2 |
circumventricular organ | 2.25e-07 | 2 |
epithalamus | 2.25e-07 | 2 |