FFCP PHASE1:Hg19::chr2:201616597..201616605,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr2:201616597..201616605,- | |||
|coexpression_cluster_id=C50 | |||
|description=CAGE_peak_at_chr2:201616597..201616605,- | |||
|id=chr2:201616597..201616605,- | |||
|ontology_enrichment_celltype=CL:0002541!8.77e-27!3;CL:0002536!4.09e-18!2;CL:0002537!7.71e-08!5 | |||
|ontology_enrichment_celltype_v019=CL:0002541;4.81e-99;3!CL:0000349;1.26e-43;19!CL:0002536;1.17e-17;2!CL:0000723;5.27e-09;61!CL:0000134;2.22e-08;55!CL:0002537;6.34e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,5.69e-99,3;CL:0000349,1.32e-43,19;CL:0002536,1.27e-17,2;CL:0002537,6.13e-08,5 | |||
|ontology_enrichment_development_v019=UBERON:0003124;8.34e-34;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!2.51e-48!14;UBERON:0000158!2.51e-48!14;UBERON:0003124!1.09e-30!7;UBERON:0000478!1.11e-27!24;UBERON:0000476!8.77e-27!3;UBERON:0000920!8.77e-27!3;UBERON:0000305!7.10e-20!7;UBERON:0004871!2.02e-17!8;UBERON:0004923!2.08e-13!57;UBERON:0001987!1.84e-09!4;UBERON:0004340!1.84e-09!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;4.81e-99;3!UBERON:0000920;4.81e-99;3!UBERON:0005631;3.91e-82;10!UBERON:0000158;3.91e-82;10!UBERON:0000478;1.68e-49;24!UBERON:0000305;9.49e-20;7!UBERON:0001987;1.63e-09;4!UBERON:0004923;5.46e-09;55 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,5.69e-99,3;UBERON:0005631,2.84e-84,14;UBERON:0000158,2.84e-84,14;UBERON:0003124,2.63e-75,7;UBERON:0000478,1.68e-49,24;UBERON:0000305,9.49e-20,7;UBERON:0004923,2.12e-18,66;UBERON:0004871,2.01e-17,8;UBERON:0001987,1.57e-09,4;UBERON:0004340,1.57e-09,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0.436882744260345,1.05506791291381,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.86493381685228,0,0.921482106297696,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.174919999992391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.803042910081,2.74792780205587,51.1713384977889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0,0,0,0,0,0,0,0,0,0.391102765469606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,1.68534503309014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.435433495793923,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr2:201616597..201616605,- | |||
}} |
Latest revision as of 04:53, 29 July 2015
Short description: | p@chr2:201616597..201616605, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:201616597..201616605, - |
Coexpression cluster: | C50_chorionic_placenta_amniotic_migratory_smallcell_chronic_choriocarcinoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 5.69e-99 | 3 |
extraembryonic cell | 1.32e-43 | 19 |
amniotic epithelial cell | 1.27e-17 | 2 |
amnion mesenchymal stem cell | 6.13e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 5.69e-99 | 3 |
extraembryonic membrane | 2.84e-84 | 14 |
membranous layer | 2.84e-84 | 14 |
chorion | 2.63e-75 | 7 |
extraembryonic structure | 1.68e-49 | 24 |
amnion | 9.49e-20 | 7 |
organ component layer | 2.12e-18 | 66 |
somatic layer of lateral plate mesoderm | 2.01e-17 | 8 |
placenta | 1.57e-09 | 4 |
allantois | 1.57e-09 | 4 |